; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002726 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002726
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr11:10852643..10859987
RNA-Seq ExpressionHG10002726
SyntenyHG10002726
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]1.3e-3245.09Show/hide
Query:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYSEGNRKILS
        R L  L+    P ++FL ETK  A      KF+ +   CF+V  VG  GGL L WK  + V ++SFS HHID  I   +G +WRF+ VYG  E   + L+
Subjt:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYSEGNRKILS

Query:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSR
        W+L+RRL+ G D PW+VG D NE+L  NEK+G   + E  +E FRN + DC L DLGF G  +TW   R  SR
Subjt:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSR

KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]6.2e-3043.43Show/hide
Query:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEGL-KWRFSDVYGYSEGNRKILS
        R+L  L+    P+++FL ETK  A      K+K  F  CF V  VG  GGL L WK  +SV I SFS +HID  I    L +WRF+ VYG+ + + + L+
Subjt:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEGL-KWRFSDVYGYSEGNRKILS

Query:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW-NGVRNNSRI
        W+L+R L      PW+VG D NE+L  +EK+G        LE FR  + DC L DLGF G  FTW NG     RI
Subjt:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW-NGVRNNSRI

XP_042939418.1 uncharacterized protein LOC122274450 [Carya illinoinensis]4.0e-2940.12Show/hide
Query:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDT---DICWEGLKWRFSDVYGYSEGNRKI
        R+L  LV    P++LFL ET+       K K+K  F  C +V+S G  GGL L WK+ VS+ IK +S  HI     D   +   W F+ VYG  E +R+ 
Subjt:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDT---DICWEGLKWRFSDVYGYSEGNRKI

Query:  LSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW
         +W L+R + +  D  W++  D NE+LS NEK G  ++ +  ++ FR+ L DCGL+DLG+ G+ FTW
Subjt:  LSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW

XP_042944747.1 uncharacterized protein LOC122278633 [Carya illinoinensis]6.9e-2938.24Show/hide
Query:  IAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEG---LKWRFSDVYGYSEGN
        +  ++L  LV  + P+ LFL ET+  + V  + KFK  F GC +V+  G  GG+ LYWK++ +V+I+SFS  H+   +  EG     W  + +YG  + +
Subjt:  IAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEG---LKWRFSDVYGYSEGN

Query:  RKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW
        R+  SWDL+R + V +D  W++  D NEI+S++EK G  S+ E  ++ F++ + +C L DLGF G+ FTW
Subjt:  RKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTW

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]8.1e-3042.29Show/hide
Query:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEGLK-WRFSDVYGYSEGNRKILS
        R+L  L+    P++LFL ETK S       K K  F  CFSV S G  GGL L W   + V+++SFS +HID  I  + L  WRF+ +YG+ + +R+  +
Subjt:  RSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEGLK-WRFSDVYGYSEGNRKILS

Query:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFT-WNGVRNNSRI
        W+LIR L      PW+VG DLNE+L  +EK+G   +    +E FR  L++C L DLG+ G  FT WNG   N+ I
Subjt:  WDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFT-WNGVRNNSRI

TrEMBL top hitse value%identityAlignment
A0A2N9HRH8 Reverse transcriptase domain-containing protein9.7e-2938.46Show/hide
Query:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS
        D  + +A   L+ LV    P +LFL ETK         + K  F  CFSV  +G  GGL L W D   V I++FS +H+D+ +   EG KWRF+  YG+ 
Subjt:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS

Query:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI
        EG+RK  SW L+ +L   +++PW+   D NEILS +E+ G+       ++ F + ++ CGL+DLGF G  FTW   R+   +
Subjt:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI

A0A2N9HU09 Reverse transcriptase domain-containing protein9.7e-2938.46Show/hide
Query:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS
        D  + +A   L+ LV    P +LFL ETK         + K  F  CFSV  +G  GGL L W D   V I++FS +H+D+ +   EG KWRF+  YG+ 
Subjt:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS

Query:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI
        EG+RK  SW L+ +L   +++PW+   D NEILS +E+ G+       ++ F + ++ CGL+DLGF G  FTW   R+   +
Subjt:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI

A0A2N9I475 Reverse transcriptase domain-containing protein9.7e-2938.46Show/hide
Query:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS
        D  + +A   L+ LV    P +LFL ETK         + K  F  CFSV  +G  GGL L W D   V I++FS +H+D+ +   EG KWRF+  YG+ 
Subjt:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS

Query:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI
        EG+RK  SW L+ +L   +++PW+   D NEILS +E+ G+       ++ F + ++ CGL+DLGF G  FTW   R+   +
Subjt:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI

A0A2N9IH27 Uncharacterized protein7.4e-2939.01Show/hide
Query:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS
        D  + +A   L+ LV    P +LFL ETK         + K  F  CFSV  +G  GGL L W D   V I++FS +H+D+ +   EG KWRF+  YG+ 
Subjt:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS

Query:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI
        EG+RK  SW L+ +L   +++PW+   D NEILS +E+ G+       ++ F + ++ CGLIDLGF G  FTW   R+   +
Subjt:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI

A0A2N9IT57 Reverse transcriptase domain-containing protein9.7e-2938.46Show/hide
Query:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS
        D  + +A   L+ LV    P +LFL ETK         + K  F  CFSV  +G  GGL L W D   V I++FS +H+D+ +   EG KWRF+  YG+ 
Subjt:  DILQKIAFRSLYGLVHVRKPEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDI-CWEGLKWRFSDVYGYS

Query:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI
        EG+RK  SW L+ +L   +++PW+   D NEILS +E+ G+       ++ F + ++ CGL+DLGF G  FTW   R+   +
Subjt:  EGNRKILSWDLIRRLDVGNDSPWVVGDDLNEILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTGAAGATCTTCTGGAAGCGTGGAAAACTTTTGATTTGATGACGGAGGAAGACAATTCTCCTGTTGGATTAATCCCAAAAATTGTTGGTGATATAAGTGGTGA
ACTCGATCTCTGTGTGATTGGTAAGCTTCTGTCGTCAAGAATCATTTCGGCTGGTATAATAAGGCGAGCTTTTGTAAATGCTTGGAGAATGAATCTTGGTTTCAGTGTGG
AGAATATAGATACGAGCGTTTACCTGACTTCTGCTATGCATGCGGTTGTATTGGACATACTGCAAAAGATAGCGTTTCGTTCCTTGTATGGTCTTGTCCATGTGAGAAAA
CCTGAAATCTTGTTCCTTTCTGAAACTAAATGTAGTGCTGATGTGTGTATGAAATTCAAGTTCAAGTGCAATTTTGCTGGTTGCTTTTCCGTTGCTAGTGTTGGGGCTAA
AGGTGGCCTCTGCTTATATTGGAAGGATTCTGTTTCTGTGGATATTAAATCATTCTCAACTCATCATATTGATACTGATATCTGTTGGGAGGGATTAAAATGGAGATTCT
CTGATGTGTATGGTTATTCTGAAGGCAATAGGAAGATCCTTTCTTGGGATCTTATTCGAAGACTTGATGTTGGCAATGATTCACCTTGGGTTGTAGGGGACGACTTGAAT
GAAATCCTAAGTGACAATGAGAAAAAGGGTGATTTTTCGAAGGATGAAGTCTGTTTAGAACGATTTAGAAATTGTCTTAGTGATTGTGGTTTGATTGATCTTGGTTTTGG
GGGTTCAATTTTCACGTGGAATGGTGTTAGAAACAATTCAAGAATTTGTGGAGCGATCACAATTTTGGAGAATCTCAACTGTGAAAAATTTGTGACTGCTTCGACAATGG
CCAGGCGTGCAACAGCAACTTCCAACGGCGTCAAAGCCAAGTTGAAGGAAGATGAGTTTGTTAAACCCAAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTGAAGATCTTCTGGAAGCGTGGAAAACTTTTGATTTGATGACGGAGGAAGACAATTCTCCTGTTGGATTAATCCCAAAAATTGTTGGTGATATAAGTGGTGA
ACTCGATCTCTGTGTGATTGGTAAGCTTCTGTCGTCAAGAATCATTTCGGCTGGTATAATAAGGCGAGCTTTTGTAAATGCTTGGAGAATGAATCTTGGTTTCAGTGTGG
AGAATATAGATACGAGCGTTTACCTGACTTCTGCTATGCATGCGGTTGTATTGGACATACTGCAAAAGATAGCGTTTCGTTCCTTGTATGGTCTTGTCCATGTGAGAAAA
CCTGAAATCTTGTTCCTTTCTGAAACTAAATGTAGTGCTGATGTGTGTATGAAATTCAAGTTCAAGTGCAATTTTGCTGGTTGCTTTTCCGTTGCTAGTGTTGGGGCTAA
AGGTGGCCTCTGCTTATATTGGAAGGATTCTGTTTCTGTGGATATTAAATCATTCTCAACTCATCATATTGATACTGATATCTGTTGGGAGGGATTAAAATGGAGATTCT
CTGATGTGTATGGTTATTCTGAAGGCAATAGGAAGATCCTTTCTTGGGATCTTATTCGAAGACTTGATGTTGGCAATGATTCACCTTGGGTTGTAGGGGACGACTTGAAT
GAAATCCTAAGTGACAATGAGAAAAAGGGTGATTTTTCGAAGGATGAAGTCTGTTTAGAACGATTTAGAAATTGTCTTAGTGATTGTGGTTTGATTGATCTTGGTTTTGG
GGGTTCAATTTTCACGTGGAATGGTGTTAGAAACAATTCAAGAATTTGTGGAGCGATCACAATTTTGGAGAATCTCAACTGTGAAAAATTTGTGACTGCTTCGACAATGG
CCAGGCGTGCAACAGCAACTTCCAACGGCGTCAAAGCCAAGTTGAAGGAAGATGAGTTTGTTAAACCCAAACTCTAG
Protein sequenceShow/hide protein sequence
METEDLLEAWKTFDLMTEEDNSPVGLIPKIVGDISGELDLCVIGKLLSSRIISAGIIRRAFVNAWRMNLGFSVENIDTSVYLTSAMHAVVLDILQKIAFRSLYGLVHVRK
PEILFLSETKCSADVCMKFKFKCNFAGCFSVASVGAKGGLCLYWKDSVSVDIKSFSTHHIDTDICWEGLKWRFSDVYGYSEGNRKILSWDLIRRLDVGNDSPWVVGDDLN
EILSDNEKKGDFSKDEVCLERFRNCLSDCGLIDLGFGGSIFTWNGVRNNSRICGAITILENLNCEKFVTASTMARRATATSNGVKAKLKEDEFVKPKL