; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002729 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002729
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA ligase
Genome locationChr11:10879713..10885122
RNA-Seq ExpressionHG10002729
SyntenyHG10002729
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006266 - DNA ligation (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003910 - DNA ligase (ATP) activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR012310 - DNA ligase, ATP-dependent, central
IPR016059 - DNA ligase, ATP-dependent, conserved site
IPR036599 - DNA ligase, ATP-dependent, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444062.1 PREDICTED: DNA ligase 1 isoform X2 [Cucumis melo]1.7e-10091.04Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HAL+QAVFISSSL IYKE M+ NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI +ALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGS+RVFSRNSDDTTSKFPDLI+IINEL KPA STFILDAEVV VDRKNNCRLMSFQELSSRGRG+K SLIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        F FDIML NGEQ
Subjt:  FVFDIMLVNGEQ

XP_022158501.1 DNA ligase 6-like isoform X1 [Momordica charantia]7.4e-10493.87Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HALAQAVFISSSL +YKEGMV NLKEKLQ FSA VLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI QALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLI IINELCKPAASTFILDAEVVAVDR+NNCRLMSFQELSSRGRGSKG LIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

XP_022158502.1 DNA ligase 6-like isoform X2 [Momordica charantia]7.4e-10493.87Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HALAQAVFISSSL +YKEGMV NLKEKLQ FSA VLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI QALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLI IINELCKPAASTFILDAEVVAVDR+NNCRLMSFQELSSRGRGSKG LIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

XP_038878216.1 DNA ligase 6-like isoform X1 [Benincasa hispida]9.4e-10795.28Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        MSKTV+HALAQAVFI+SSL I+KEGMVENLKEKLQNFSATVLDAYN+LPNFDLIVPSLM KGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCE+KYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSL+AVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

XP_038878217.1 DNA ligase 6-like isoform X2 [Benincasa hispida]9.4e-10795.28Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        MSKTV+HALAQAVFI+SSL I+KEGMVENLKEKLQNFSATVLDAYN+LPNFDLIVPSLM KGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCE+KYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSL+AVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

TrEMBL top hitse value%identityAlignment
A0A1S3B9K7 uncharacterized protein LOC103487505 isoform X62.0e-9990.61Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNF-DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        M KTV+HAL+QAVFISSSL IYKE M+ NLKEKLQNFSATVLDAYNVLPNF DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI +ALKIFENK
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNF-DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
        AFTCEYKYDGQRAQIHKLADGS+RVFSRNSDDTTSKFPDLI+IINEL KPA STFILDAEVV VDRKNNCRLMSFQELSSRGRG+K SLIAVDSIKVDIC
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +F FDIML NGEQ
Subjt:  LFVFDIMLVNGEQ

A0A1S3BA94 DNA ligase8.3e-10191.04Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HAL+QAVFISSSL IYKE M+ NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI +ALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGS+RVFSRNSDDTTSKFPDLI+IINEL KPA STFILDAEVV VDRKNNCRLMSFQELSSRGRG+K SLIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        F FDIML NGEQ
Subjt:  FVFDIMLVNGEQ

A0A5A7VEZ9 DNA ligase2.0e-9990.61Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNF-DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        M KTV+HAL+QAVFISSSL IYKE M+ NLKEKLQNFSATVLDAYNVLPNF DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI +ALKIFENK
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNF-DLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
        AFTCEYKYDGQRAQIHKLADGS+RVFSRNSDDTTSKFPDLI+IINEL KPA STFILDAEVV VDRKNNCRLMSFQELSSRGRG+K SLIAVDSIKVDIC
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +F FDIML NGEQ
Subjt:  LFVFDIMLVNGEQ

A0A6J1DXE4 DNA ligase3.6e-10493.87Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HALAQAVFISSSL +YKEGMV NLKEKLQ FSA VLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI QALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLI IINELCKPAASTFILDAEVVAVDR+NNCRLMSFQELSSRGRGSKG LIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

A0A6J1E130 DNA ligase3.6e-10493.87Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA
        M KTV+HALAQAVFISSSL +YKEGMV NLKEKLQ FSA VLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGI QALKIFENKA
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKA

Query:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL
        FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLI IINELCKPAASTFILDAEVVAVDR+NNCRLMSFQELSSRGRGSKG LIAVDSIKVDIC+
Subjt:  FTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICL

Query:  FVFDIMLVNGEQ
        FVFDIML NGEQ
Subjt:  FVFDIMLVNGEQ

SwissProt top hitse value%identityAlignment
F4HPZ9 DNA ligase 61.1e-6860.56Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVEN-LKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        M +TV+ AL +A+ ++S    + + + E+  +EKL+  SA V++AYN+LP+ D++VPSLM K IEFS+S+LSMVPGIPIKPMLAKI  G+ +   + + K
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVEN-LKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
        AFTCEYKYDGQRAQIHKL DG+V +FSRN D+TTS+FPDL+++I +   PAA TF+LDAEVVA DR N  +LMSFQELS+R RGSK +LI  +SIKV++C
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +FVFDIM VNGEQ
Subjt:  LFVFDIMLVNGEQ

P18858 DNA ligase 11.5e-3841.47Show/hide
Query:  KTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVL--------PNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALK
        ++V+ AL+QAV ++   + +   MV+  K K      T L+   ++        P+ D I+P L+  G+E       + PGIP+KPMLA  T GIS+ LK
Subjt:  KTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVL--------PNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALK

Query:  IFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSI
         FE  AFTCEYKYDGQRAQIH L  G V++FSRN +D T K+PD+I  I ++  P+ ++FILD E VA DR+   ++  FQ L++R R      +    I
Subjt:  IFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSI

Query:  KVDICLFVFDIMLVNGE
        +V +CL+ FD++ +NGE
Subjt:  KVDICLFVFDIMLVNGE

P37913 DNA ligase 11.4e-3639.63Show/hide
Query:  KTVVHALAQAVFISSSLKIYKEGMVENLKEK--------LQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALK
        ++V+ ALAQAV ++   + +   +V+  K K        L+     +   +  +P+ D I+P L+  G+E       + PG+P+KPMLA  T G+S+ LK
Subjt:  KTVVHALAQAVFISSSLKIYKEGMVENLKEK--------LQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALK

Query:  IFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSI
         FE   FTCEYKYDGQRAQIH L  G V++FSRN +D T K+PD+I  I ++  P+ ++FILD E VA DR+   ++  FQ L++R R      +    I
Subjt:  IFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSI

Query:  KVDICLFVFDIMLVNGE
        +V +CL+ FD++ +NGE
Subjt:  KVDICLFVFDIMLVNGE

Q42572 DNA ligase 11.9e-3840.38Show/hide
Query:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        +TV+ AL QA        +Y E   +   N K  L+  +  V   + VLP +D+IVP+L+  G+     + +   G+PI PMLAK T G+++ L  F++ 
Subjt:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
         FTCEYKYDG+RAQIH + DG+  ++SRN++  T K+PD+   ++ L KP+  +FILD EVVA DR+   +++ FQ LS+R R +    + V+ IKV +C
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +F FD++ +NG+Q
Subjt:  LFVFDIMLVNGEQ

Q869E1 DNA ligase 12.1e-4041.28Show/hide
Query:  KTVVHALAQAVFISSSL--------KIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMG-KGIEFSSSSLSMVPGIPIKPMLAKITNGISQAL
        ++V+ ALA++V ++  +         I K+   E  +E+ QN  + V  AY+ LPN+DL VP L+   GI+   S+ S+  GIP+KPMLA+ T GISQ L
Subjt:  KTVVHALAQAVFISSSL--------KIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMG-KGIEFSSSSLSMVPGIPIKPMLAKITNGISQAL

Query:  KIFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDS
          F +  FTCE+KYDG+RAQIH+L DG+  +++RN +D T K+PD++  + +   P   +FILD E VA D     +++SFQ LS+R R S    + +  
Subjt:  KIFENKAFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDS

Query:  IKVDICLFVFDIMLVNGE
        IKV +C+F FD++ +NG+
Subjt:  IKVDICLFVFDIMLVNGE

Arabidopsis top hitse value%identityAlignment
AT1G08130.1 DNA ligase 11.4e-3940.38Show/hide
Query:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        +TV+ AL QA        +Y E   +   N K  L+  +  V   + VLP +D+IVP+L+  G+     + +   G+PI PMLAK T G+++ L  F++ 
Subjt:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
         FTCEYKYDG+RAQIH + DG+  ++SRN++  T K+PD+   ++ L KP+  +FILD EVVA DR+   +++ FQ LS+R R +    + V+ IKV +C
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +F FD++ +NG+Q
Subjt:  LFVFDIMLVNGEQ

AT1G49250.1 ATP-dependent DNA ligase7.3e-3335.85Show/hide
Query:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        +TV+ AL QA        +Y E   +   N+K  L   +  V + +++LP +D+IV +L+  G+     + ++  G+P++PMLAK T  +   L+ F++ 
Subjt:  KTVVHALAQAVFISSSLKIYKEGMVE---NLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
         FT EYKYDG+RAQI+ + DG+V +FSR+++  T K+PD+  +++ L KP   +FILD EVV  +R+   +++  Q  S+R   +    + V  IKV +C
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGE
        +F FDI+ +NG+
Subjt:  LFVFDIMLVNGE

AT1G66730.1 DNA LIGASE 67.5e-7060.56Show/hide
Query:  MSKTVVHALAQAVFISSSLKIYKEGMVEN-LKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK
        M +TV+ AL +A+ ++S    + + + E+  +EKL+  SA V++AYN+LP+ D++VPSLM K IEFS+S+LSMVPGIPIKPMLAKI  G+ +   + + K
Subjt:  MSKTVVHALAQAVFISSSLKIYKEGMVEN-LKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENK

Query:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC
        AFTCEYKYDGQRAQIHKL DG+V +FSRN D+TTS+FPDL+++I +   PAA TF+LDAEVVA DR N  +LMSFQELS+R RGSK +LI  +SIKV++C
Subjt:  AFTCEYKYDGQRAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDIC

Query:  LFVFDIMLVNGEQ
        +FVFDIM VNGEQ
Subjt:  LFVFDIMLVNGEQ

AT5G57160.1 DNA ligase IV1.8e-0727.89Show/hide
Query:  LKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKAFTCEYKYDGQRAQIHKLA
        LK  K GM E  K   Q F     D +NV  +  L+   L  +        + +  G  ++P LA     ++ A K    K    E K+DG R QIHK  
Subjt:  LKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKAFTCEYKYDGQRAQIHKLA

Query:  DGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICLFVFDIMLV
           +  FSRN  D +     + ++I +         ILD E++  D   N     F E  S    +K +   +DS K  +C   FD++ V
Subjt:  DGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICLFVFDIMLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAACTGTTGTTCATGCTCTGGCCCAGGCTGTTTTCATAAGTTCGTCTCTCAAGATTTACAAGGAAGGAATGGTGGAAAATTTAAAGGAGAAGCTTCAGAACTT
TTCAGCTACTGTACTAGATGCATACAATGTTCTTCCAAATTTTGATCTGATTGTTCCTTCTCTTATGGGCAAAGGGATTGAATTCTCATCATCGTCTTTATCAATGGTTC
CAGGAATACCTATTAAGCCAATGCTCGCGAAGATTACCAATGGTATATCTCAAGCATTGAAAATCTTTGAGAATAAAGCTTTTACATGTGAATACAAATATGATGGTCAG
CGTGCACAAATTCACAAATTGGCAGATGGTTCTGTGCGAGTTTTCTCTCGGAACAGTGATGATACTACGTCAAAATTTCCAGATTTGATTGAAATAATTAATGAATTATG
TAAACCTGCTGCCTCAACTTTCATACTGGATGCCGAGGTTGTTGCTGTTGATAGAAAAAATAATTGCAGACTAATGTCTTTCCAAGAATTATCATCACGTGGGAGAGGGA
GCAAAGGCTCACTGATTGCTGTTGATAGCATAAAGGTTGATATTTGTTTGTTTGTCTTTGACATCATGCTTGTCAATGGAGAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAACTGTTGTTCATGCTCTGGCCCAGGCTGTTTTCATAAGTTCGTCTCTCAAGATTTACAAGGAAGGAATGGTGGAAAATTTAAAGGAGAAGCTTCAGAACTT
TTCAGCTACTGTACTAGATGCATACAATGTTCTTCCAAATTTTGATCTGATTGTTCCTTCTCTTATGGGCAAAGGGATTGAATTCTCATCATCGTCTTTATCAATGGTTC
CAGGAATACCTATTAAGCCAATGCTCGCGAAGATTACCAATGGTATATCTCAAGCATTGAAAATCTTTGAGAATAAAGCTTTTACATGTGAATACAAATATGATGGTCAG
CGTGCACAAATTCACAAATTGGCAGATGGTTCTGTGCGAGTTTTCTCTCGGAACAGTGATGATACTACGTCAAAATTTCCAGATTTGATTGAAATAATTAATGAATTATG
TAAACCTGCTGCCTCAACTTTCATACTGGATGCCGAGGTTGTTGCTGTTGATAGAAAAAATAATTGCAGACTAATGTCTTTCCAAGAATTATCATCACGTGGGAGAGGGA
GCAAAGGCTCACTGATTGCTGTTGATAGCATAAAGGTTGATATTTGTTTGTTTGTCTTTGACATCATGCTTGTCAATGGAGAGCAGTAA
Protein sequenceShow/hide protein sequence
MSKTVVHALAQAVFISSSLKIYKEGMVENLKEKLQNFSATVLDAYNVLPNFDLIVPSLMGKGIEFSSSSLSMVPGIPIKPMLAKITNGISQALKIFENKAFTCEYKYDGQ
RAQIHKLADGSVRVFSRNSDDTTSKFPDLIEIINELCKPAASTFILDAEVVAVDRKNNCRLMSFQELSSRGRGSKGSLIAVDSIKVDICLFVFDIMLVNGEQ