CuGenDBv2

Gene ID	HG10002734
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP synthase subunit a, chloroplastic
Genome location	Chr11:10989624..10990359
RNA-Seq Expression	HG10002734
Synteny	HG10002734
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88818.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

4.5e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

AHM91116.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

4.5e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

AHM91176.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

4.5e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

YP_009751726.1 CF0 subunit IV [Herpetospermum pedunculosum]

4.5e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

YP_009752654.1 CF0 subunit IV [Ampelosycios humblotii]

4.5e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4ETZ3 ATP synthase subunit a, chloroplastic

2.2e-38

97.62

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

A0A1X9Q128 ATP synthase subunit a, chloroplastic

2.2e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

A0A218KG29 ATP synthase subunit a, chloroplastic

2.2e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

A0A249RZA4 ATP synthase subunit a, chloroplastic

2.2e-38

97.62

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

G3ETX3 ATP synthase subunit a, chloroplastic

2.2e-38

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

SwissProt top hits

e value

%identity

Alignment

Q09G58 ATP synthase subunit a, chloroplastic

4.6e-38

90.48

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA +AVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Q09X29 ATP synthase subunit a, chloroplastic

7.2e-39

91.67

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MN+LLCSINT KGLYDISGVEVGQHLYW+IGGFQVHAQVLITSWVVIAILLGS+IIAVRNPQTIPTDGQNFFEYVLEFIRD ++
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Q0G9N1 ATP synthase subunit a, chloroplastic

3.6e-38

91.67

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA IAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Q4FGF5 ATP synthase subunit a, chloroplastic

4.6e-38

90.48

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MN+L CS+NT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSW VIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Q4VZP5 ATP synthase subunit a, chloroplastic

5.9e-41

97.62

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD +K
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

5.3e-37

83.72

Show/hide

Query:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK
        MN+L CSINT  ++GLY+ISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA++A+RNPQTIPTDGQNFFE+VLEFIRD +K
Subjt:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTK

Sequences

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CDS sequence

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ATGAATATTCTATTATGTTCTATCAACACACAAAAGGGGTTATACGATATATCTGGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGC
CCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAAT
ATGTCCTTGAATTCATTCGAGACTGCACCAAGATATATCTCAACTATAAGTTGACACATATGATGAACAGGAGTACAATTAGAAGGAAGGTTAGAAAAAAGCTTTCGAGA
TATAAGGAAAAGAAGAAATTGAAGAAGAAAAAAAAGAGGGTAAGAAATACAAGAAAAGGAAAAGAAGATGTTTAA

mRNA sequence

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Protein sequence

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MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDCTKIYLNYKLTHMMNRSTIRRKVRKKLSR
YKEKKKLKKKKKRVRNTRKGKEDV

HG10002734 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome