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HG10002744 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002744
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiondisease resistance protein RGA2
Genome locationChr11:11233557..11234054
RNA-Seq ExpressionHG10002744
SyntenyHG10002744
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR002182 - NB-ARC
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058591.1 disease resistance protein RGA2-like isoform X1 [Cucumis melo var. makuwa]2.2e-1857.69Show/hide
Query:  QIHFNNPNADQPRIQKNLNYLSHPTGMGL---------EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSP
        + HFNNP   Q       N LS+P GM           +K+ GR DDM+NLKK LLA+D  VKA  NVSFIAIVG+GGIGKTTLAK+L+NDK VSDCF  
Subjt:  QIHFNNPNADQPRIQKNLNYLSHPTGMGL---------EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSP

Query:  RFWI
        R WI
Subjt:  RFWI

KAA0058591.1 disease resistance protein RGA2-like isoform X1 [Cucumis melo var. makuwa]2.0e-1170.91Show/hide
Query:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLS
        EV GKKLYVRGDP NE+VVSEQTRH SF Y+I   +DV+SKL QAKGLRT + L+
Subjt:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLS

KAA0058591.1 disease resistance protein RGA2-like isoform X1 [Cucumis melo var. makuwa]8.3e-1866.67Show/hide
Query:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        LSHP G   E        K+IGR+DDMS +K LLLA DDMNVKA  NVSFIAIVG+GGIGKTTLA+AL++DK+V DCF+PR WI
Subjt:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

XP_038898113.1 putative disease resistance protein RGA3 isoform X1 [Benincasa hispida]8.3e-1866.67Show/hide
Query:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        LSHP G   E        K+IGR+DDMS +K LLLA DDMNVKA  NVSFIAIVG+GGIGKTTLA+AL++DK+V DCF+PR WI
Subjt:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

XP_038898115.1 putative disease resistance protein RGA3 isoform X3 [Benincasa hispida]8.3e-1866.67Show/hide
Query:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        LSHP G   E        K+IGR+DDMS +K LLLA DDMNVKA  NVSFIAIVG+GGIGKTTLA+AL++DK+V DCF+PR WI
Subjt:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

XP_038900213.1 putative disease resistance protein RGA3 isoform X1 [Benincasa hispida]8.3e-1866.67Show/hide
Query:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        LSHP G   E        K+IGR+DDMS +K LLLA DDMNVKA  NVSFIAIVG+GGIGKTTLA+AL++DK+V DCF+PR WI
Subjt:  LSHPTGMGLE--------KLIGRNDDMSNLKKLLLA-DDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

TrEMBL top hitse value%identityAlignment
A0A1S3CEH4 disease resistance protein RGA25.8e-0959.02Show/hide
Query:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLSSDCRRK
        +V  KKLYV GD  N +VVSEQT HFSF YKI+  +DV+SKL +AKGLRT + L S    K
Subjt:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLSSDCRRK

A0A1S3CEH4 disease resistance protein RGA22.5e-1259.15Show/hide
Query:  TGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        + +  E++IGR+DD   LK LLL DDM++K  +NVS IAIVG+GGIGKTTLAK+L+ND DVS  F  + WI
Subjt:  TGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

A0A5A7UWP6 Disease resistance protein RGA28.4e-0855.74Show/hide
Query:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLSSDCRRK
        +V  KKL+V GD  N +VVSEQT HFS  YKI+  +DV+SKL +AKGLRT + L S    K
Subjt:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLSSDCRRK

A0A5A7UWP6 Disease resistance protein RGA21.1e-1254.22Show/hide
Query:  RIQKNLNYLSHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        R++ +L+  +H + +  E++IGR+DD   LK LLL DDM++K  +NVS IAIVG+GGIGKTTLAK+L+ND DVS  F  + WI
Subjt:  RIQKNLNYLSHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

A0A5A7UYN4 Disease resistance protein RGA2-like isoform X11.1e-1857.69Show/hide
Query:  QIHFNNPNADQPRIQKNLNYLSHPTGMGL---------EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSP
        + HFNNP   Q       N LS+P GM           +K+ GR DDM+NLKK LLA+D  VKA  NVSFIAIVG+GGIGKTTLAK+L+NDK VSDCF  
Subjt:  QIHFNNPNADQPRIQKNLNYLSHPTGMGL---------EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSP

Query:  RFWI
        R WI
Subjt:  RFWI

A0A5A7UYN4 Disease resistance protein RGA2-like isoform X19.5e-1270.91Show/hide
Query:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLS
        EV GKKLYVRGDP NE+VVSEQTRH SF Y+I   +DV+SKL QAKGLRT + L+
Subjt:  EVGGKKLYVRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLS

A0A5A7UYN4 Disease resistance protein RGA2-like isoform X11.1e-1259.15Show/hide
Query:  TGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        + +  E++IGR+DD   LK LLL DDM++K  +NVS IAIVG+GGIGKTTLAK+L+ND DVS+ F  + WI
Subjt:  TGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

A0A6J1DHT2 putative disease resistance protein RGA42.1e-1160.61Show/hide
Query:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        E++IGR+DD   +K LLL  DMNV   +NV F+ IVG+ GIGKTTLAK+L+ND DVS CF  R WI
Subjt:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

SwissProt top hitse value%identityAlignment
Q7XA39 Putative disease resistance protein RGA48.9e-0738.46Show/hide
Query:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        K+ GR+ +   + K+L+    NV  A  +    I+G+GG+GKTTLA+ +FND+ V+  F+P+ W+
Subjt:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

Q7XBQ9 Disease resistance protein RGA24.4e-0638.46Show/hide
Query:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        ++ GR+ +   + K+L+    NV  A ++S + I+G+GG+GKTTLA+ +FND+ V++ F  + WI
Subjt:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

Q9LRR4 Putative disease resistance RPP13-like protein 12.0e-0637.5Show/hide
Query:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW
        ++ GR+DD   + + L+ ++      N ++ +AIVGIGG+GKTTL++ L+ND+ V   F  + W
Subjt:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW

Q9LRR5 Putative disease resistance protein At3g144607.5e-0637.84Show/hide
Query:  SHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        S P  +   +L+GR +D   L  LLL+DD    +    + I++VG+ G+GKTTL + +FND  V++ F  + WI
Subjt:  SHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

Q9STE5 Putative disease resistance RPP13-like protein 21.3e-0541.54Show/hide
Query:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW
        E+++G  DD   L   LL DD      N +  I+I G+ G+GKT+LA+ LFN  DV + F  R W
Subjt:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW

Arabidopsis top hitse value%identityAlignment
AT1G58848.1 Disease resistance protein (CC-NBS-LRR class) family1.7e-0543.1Show/hide
Query:  SNLKKLL--LADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        +N+KKL+  L D+ NV+       ++I G+GG+GKTTLAK +FN +DV   F    W+
Subjt:  SNLKKLL--LADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein5.4e-0737.84Show/hide
Query:  SHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI
        S P  +   +L+GR +D   L  LLL+DD    +    + I++VG+ G+GKTTL + +FND  V++ F  + WI
Subjt:  SHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWI

AT3G14470.1 NB-ARC domain-containing disease resistance protein1.4e-0737.5Show/hide
Query:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW
        ++ GR+DD   + + L+ ++      N ++ +AIVGIGG+GKTTL++ L+ND+ V   F  + W
Subjt:  KLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW

AT3G46710.1 NB-ARC domain-containing disease resistance protein9.1e-0741.54Show/hide
Query:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW
        E+++G  DD   L   LL DD      N +  I+I G+ G+GKT+LA+ LFN  DV + F  R W
Subjt:  EKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFW

AT4G19060.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.0e-0643.86Show/hide
Query:  LKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWIRFY
        LK  LL      K +     +AIVG  G+GKTTL +A+FND+DV   + PR W+  Y
Subjt:  LKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWIRFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCATTTCAATAATCCAAATGCTGATCAACCGAGGATACAAAAAAATCTTAATTATTTATCTCATCCAACTGGGATGGGACTGGAGAAATTGATTGGAAGGAA
TGATGATATGAGCAACCTAAAAAAGCTTTTACTAGCAGATGATATGAATGTGAAAGCTGCTAATAATGTTTCATTCATTGCCATTGTTGGAATTGGTGGAATAGGCAAGA
CAACCTTGGCTAAAGCTCTCTTCAATGATAAAGATGTCTCAGATTGTTTTAGTCCAAGATTTTGGATTCGCTTTTATATGTACGTGGAGGTAGGTGGAAAGAAATTATAT
GTACGTGGAGATCCAAAGAATGAATTTGTTGTGAGTGAACAAACTCGTCATTTTTCATTTTCCTATAAAATAAAATTAGGGGAGGATGTTATATCCAAATTACTTCAGGC
CAAAGGATTAAGAACGCTCATTTTACTCTCTTCAGATTGCCGTAGGAAGAAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCATTTCAATAATCCAAATGCTGATCAACCGAGGATACAAAAAAATCTTAATTATTTATCTCATCCAACTGGGATGGGACTGGAGAAATTGATTGGAAGGAA
TGATGATATGAGCAACCTAAAAAAGCTTTTACTAGCAGATGATATGAATGTGAAAGCTGCTAATAATGTTTCATTCATTGCCATTGTTGGAATTGGTGGAATAGGCAAGA
CAACCTTGGCTAAAGCTCTCTTCAATGATAAAGATGTCTCAGATTGTTTTAGTCCAAGATTTTGGATTCGCTTTTATATGTACGTGGAGGTAGGTGGAAAGAAATTATAT
GTACGTGGAGATCCAAAGAATGAATTTGTTGTGAGTGAACAAACTCGTCATTTTTCATTTTCCTATAAAATAAAATTAGGGGAGGATGTTATATCCAAATTACTTCAGGC
CAAAGGATTAAGAACGCTCATTTTACTCTCTTCAGATTGCCGTAGGAAGAAAGTGTGA
Protein sequenceShow/hide protein sequence
MQIHFNNPNADQPRIQKNLNYLSHPTGMGLEKLIGRNDDMSNLKKLLLADDMNVKAANNVSFIAIVGIGGIGKTTLAKALFNDKDVSDCFSPRFWIRFYMYVEVGGKKLY
VRGDPKNEFVVSEQTRHFSFSYKIKLGEDVISKLLQAKGLRTLILLSSDCRRKKV