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HG10002745 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002745
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:11282113..11282430
RNA-Seq ExpressionHG10002745
SyntenyHG10002745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]9.3e-1550.47Show/hide
Query:  AVAATMAMVVVILTLNPSN-CKTAPLLPSNFVNESIAAATS-IFGNGLPEECLVLRKNTIQYPS-KKTGTRGSPAC-RNYKDRYYQCIDSQGSFKPKICK
        A  +T AM ++ILTL  S+ C  A +LPSNF NE+I A TS IF NGL ++C  + +N I Y S  +TG+R S  C R Y   Y +CI +QGS KPK C+
Subjt:  AVAATMAMVVVILTLNPSN-CKTAPLLPSNFVNESIAAATS-IFGNGLPEECLVLRKNTIQYPS-KKTGTRGSPAC-RNYKDRYYQCIDSQGSFKPKICK

Query:  SQYERTC
        S Y+RTC
Subjt:  SQYERTC
TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein4.5e-1550.47Show/hide
Query:  AVAATMAMVVVILTLNPSN-CKTAPLLPSNFVNESIAAATS-IFGNGLPEECLVLRKNTIQYPS-KKTGTRGSPAC-RNYKDRYYQCIDSQGSFKPKICK
        A  +T AM ++ILTL  S+ C  A +LPSNF NE+I A TS IF NGL ++C  + +N I Y S  +TG+R S  C R Y   Y +CI +QGS KPK C+
Subjt:  AVAATMAMVVVILTLNPSN-CKTAPLLPSNFVNESIAAATS-IFGNGLPEECLVLRKNTIQYPS-KKTGTRGSPAC-RNYKDRYYQCIDSQGSFKPKICK

Query:  SQYERTC
        S Y+RTC
Subjt:  SQYERTC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCGGTGGCGGCAACCATGGCCATGGTGGTCGTGATTTTGACGCTTAATCCGAGTAATTGTAAGACTGCCCCTCTACTTCCTTCTAATTTTGTCAACGAGTCCAT
CGCTGCTGCAACATCCATATTTGGTAATGGTCTTCCTGAAGAATGCCTCGTTTTGAGAAAGAATACCATTCAGTATCCTAGTAAAAAGACTGGCACTCGAGGTTCACCTG
CATGTCGGAATTATAAAGATAGGTATTATCAGTGTATAGACAGTCAAGGATCCTTTAAGCCAAAAATTTGTAAGAGTCAATATGAACGCACTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCGGTGGCGGCAACCATGGCCATGGTGGTCGTGATTTTGACGCTTAATCCGAGTAATTGTAAGACTGCCCCTCTACTTCCTTCTAATTTTGTCAACGAGTCCAT
CGCTGCTGCAACATCCATATTTGGTAATGGTCTTCCTGAAGAATGCCTCGTTTTGAGAAAGAATACCATTCAGTATCCTAGTAAAAAGACTGGCACTCGAGGTTCACCTG
CATGTCGGAATTATAAAGATAGGTATTATCAGTGTATAGACAGTCAAGGATCCTTTAAGCCAAAAATTTGTAAGAGTCAATATGAACGCACTTGCTAA
Protein sequenceShow/hide protein sequence
MVAVAATMAMVVVILTLNPSNCKTAPLLPSNFVNESIAAATSIFGNGLPEECLVLRKNTIQYPSKKTGTRGSPACRNYKDRYYQCIDSQGSFKPKICKSQYERTC