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HG10002811 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002811
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationChr11:13159938..13160288
RNA-Seq ExpressionHG10002811
SyntenyHG10002811
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144014.1 uncharacterized protein LOC111013803 [Momordica charantia]5.8e-2652.73Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSHA+    +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +T RIPS GE+ +Q  K SRC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+KTC
Subjt:  RNIGHNQKTC

XP_022151004.1 uncharacterized protein LOC111019024 [Momordica charantia]7.6e-2653.21Show/hide
Query:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR
        C EFDY++IPCSHA+A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +T RIPS GE+ +Q  K  RC 
Subjt:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR

Query:  NIGHNQKTC
          GHN+KTC
Subjt:  NIGHNQKTC

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]7.6e-2655.05Show/hide
Query:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR
        C EFDY++IPCSHA+A   +RN++PY L   AYT  SWV +YAEPIFP+ H S W + P F D  V  P +V  VG  RTVRIPS GE+ +Q  K  RC 
Subjt:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR

Query:  NIGHNQKTC
          GHN KTC
Subjt:  NIGHNQKTC

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]2.9e-2551.82Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSH +A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG   T RIPS GE+ +Q  K  RC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+KTC
Subjt:  RNIGHNQKTC

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]2.0e-2653.64Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSHA+A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +TVRIPS GE+ +Q  K  RC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+KTC
Subjt:  RNIGHNQKTC

TrEMBL top hitse value%identityAlignment
A0A6J1CR19 uncharacterized protein LOC1110138032.8e-2652.73Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSHA+    +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +T RIPS GE+ +Q  K SRC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+KTC
Subjt:  RNIGHNQKTC

A0A6J1DBQ5 uncharacterized protein LOC1110190243.7e-2653.21Show/hide
Query:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR
        C EFDY++IPCSHA+A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +T RIPS GE+ +Q  K  RC 
Subjt:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR

Query:  NIGHNQKTC
          GHN+KTC
Subjt:  NIGHNQKTC

A0A6J1DJT1 uncharacterized protein LOC1110207153.7e-2655.05Show/hide
Query:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR
        C EFDY++IPCSHA+A   +RN++PY L   AYT  SWV +YAEPIFP+ H S W + P F D  V  P +V  VG  RTVRIPS GE+ +Q  K  RC 
Subjt:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCR

Query:  NIGHNQKTC
          GHN KTC
Subjt:  NIGHNQKTC

A0A6J1DTD4 uncharacterized protein LOC1110238041.4e-2551.82Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSHA+A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +T RIPS GE+ +Q  K  RC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+K C
Subjt:  RNIGHNQKTC

A0A6J1DYC4 uncharacterized protein LOC1110256789.6e-2753.64Show/hide
Query:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC
        +C EFDY++IPCSHA+A   +RN++PY L   AYT  SW+ +YAEPIFPV H S W + P F +  V PP+ V  VG  +TVRIPS GE+ +Q  K  RC
Subjt:  ACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRC

Query:  RNIGHNQKTC
           GHN+KTC
Subjt:  RNIGHNQKTC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase3.0e-0433.33Show/hide
Query:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPP
        CG+F  Y+ PC HALA C+    +P       YT+     +YA     V   S W  P       +LPP
Subjt:  CGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGACTTGCATGTGGAGAATTTGATTACTATGAGATCCCTTGTTCGCATGCTCTTGCCACTTGTCGAGTTAGGAATGTTGATCCATATGGGTTATACTCTAGTGC
ATATACAGTTTGGTCCTGGGTGGCTAGTTACGCTGAGCCCATATTCCCTGTATGTCATTCATCAGAGTGGAAGACACCACCTAGATTCGAAGATAAATTAGTCTTACCCC
CAAGGGTTGTTGGAACTGTTGGTCATTGTCGAACTGTAAGAATCCCTTCGAACGGTGAAATCCATAAACAAATTCACAAGTATTCTCGGTGTCGTAACATTGGGCATAAT
CAAAAGACATGTCGAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAGACTTGCATGTGGAGAATTTGATTACTATGAGATCCCTTGTTCGCATGCTCTTGCCACTTGTCGAGTTAGGAATGTTGATCCATATGGGTTATACTCTAGTGC
ATATACAGTTTGGTCCTGGGTGGCTAGTTACGCTGAGCCCATATTCCCTGTATGTCATTCATCAGAGTGGAAGACACCACCTAGATTCGAAGATAAATTAGTCTTACCCC
CAAGGGTTGTTGGAACTGTTGGTCATTGTCGAACTGTAAGAATCCCTTCGAACGGTGAAATCCATAAACAAATTCACAAGTATTCTCGGTGTCGTAACATTGGGCATAAT
CAAAAGACATGTCGAGCTTAG
Protein sequenceShow/hide protein sequence
MIRLACGEFDYYEIPCSHALATCRVRNVDPYGLYSSAYTVWSWVASYAEPIFPVCHSSEWKTPPRFEDKLVLPPRVVGTVGHCRTVRIPSNGEIHKQIHKYSRCRNIGHN
QKTCRA