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HG10002841 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002841
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGag protease polyprotein
Genome locationChr11:14335941..14336129
RNA-Seq ExpressionHG10002841
SyntenyHG10002841
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877200.1 uncharacterized protein LOC120069497 [Benincasa hispida]4.8e-1974.19Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS
        S FDG+SVDP I +NWI +IETIF HMN  E QKVN  TFMLRGDAKFWWESTQR I+GS+S
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS

XP_038880430.1 uncharacterized protein LOC120072084 [Benincasa hispida]1.3e-1977.42Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS
        SIFDG+ VDP  A+NWI +IETIFRHMN  E QKVN ATFMLRGDAKFWWESTQR I+GS+S
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS

XP_038888017.1 uncharacterized protein LOC120077950 [Benincasa hispida]2.8e-1972.58Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS
        S FDG+SVDP IA+NWI +IET+FRHMN PE QKVN ATF+LRGD KFWWEST+R I+G++S
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS

XP_038902429.1 uncharacterized protein LOC120089074 [Benincasa hispida]2.5e-2077.42Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS
        S FDG+SVDP I KNW  +IETIFRHMN PE QKVNYATFMLRGDAKFWWESTQR I+ ++S
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS

XP_038902446.1 uncharacterized protein LOC120089092 [Benincasa hispida]9.6e-2074.19Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS
        S FDG+SVDP IA+NWI +IETIFRHMN PE QKVN ATFMLR DAKFWW+STQR ++G++S
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS

TrEMBL top hitse value%identityAlignment
A0A151R7Q7 Uncharacterized protein1.5e-1057.63Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRG
        S FDG   +P  A+ WI +IE IFR MN P+ QKVNYA FML G+AK+WW+ST+R + G
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRG

A0A151SLW6 Retrotrans_gag domain-containing protein3.4e-1055.93Show/hide
Query:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRG
        S FDG   +P  A+ WI +IE IFR MN P+ QKVNYA FML G+A++WW+ST+R + G
Subjt:  SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRG

A0A6J1EKD9 uncharacterized protein LOC1114354601.0e-1150.88Show/hide
Query:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR
        +F+G ++DP + ++W+  IETIF HMN PE QKV  A+FML+G+A FWW++ Q+ +R
Subjt:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR

A0A6J1HS13 uncharacterized protein LOC111467258 isoform X15.2e-1149.12Show/hide
Query:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR
        +F+G ++DP + ++W+  IETIF HM  PE QKV  A+FML+G+A FWW++ Q+ +R
Subjt:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR

A0A6J1HWE2 uncharacterized protein LOC111467258 isoform X25.2e-1149.12Show/hide
Query:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR
        +F+G ++DP + ++W+  IETIF HM  PE QKV  A+FML+G+A FWW++ Q+ +R
Subjt:  IFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGATATTTGATGGGACCTCTGTAGATCCAAATATAGCAAAAAACTGGATAGCAAAAATAGAAACTATTTTCCGCCACATGAACACCCCAGAAAGACAAAAGGTTAATTA
CGCCACCTTCATGTTAAGAGGTGATGCAAAGTTTTGGTGGGAATCAACACAAAGAGCAATCAGAGGTTCGCTCTCTTAG
mRNA sequenceShow/hide mRNA sequence
TCGATATTTGATGGGACCTCTGTAGATCCAAATATAGCAAAAAACTGGATAGCAAAAATAGAAACTATTTTCCGCCACATGAACACCCCAGAAAGACAAAAGGTTAATTA
CGCCACCTTCATGTTAAGAGGTGATGCAAAGTTTTGGTGGGAATCAACACAAAGAGCAATCAGAGGTTCGCTCTCTTAG
Protein sequenceShow/hide protein sequence
SIFDGTSVDPNIAKNWIAKIETIFRHMNTPERQKVNYATFMLRGDAKFWWESTQRAIRGSLS