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HG10002847 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002847
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMembrane-anchored ubiquitin-fold protein
Genome locationChr11:14560130..14563874
RNA-Seq ExpressionHG10002847
SyntenyHG10002847
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR017000 - Membrane-anchored ubiquitin-fold protein
IPR029071 - Ubiquitin-like domain superfamily
IPR039540 - UBL3-like, ubiquitin domain
IPR040015 - UBL3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060276.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis melo var. makuwa]1.1e-4897.06Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLP GVITMHVVVQPTIAKAK 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GA
        G+
Subjt:  GA

XP_004148006.2 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus]2.2e-4994.34Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAK+
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           + E
Subjt:  GATISE

XP_008450137.1 PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Cucumis melo]2.4e-4893.4Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLP GVITMHVVVQPTIAKAK 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           + E
Subjt:  GATISE

XP_022156522.1 membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia]4.1e-4895Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERI+AEWPKDKKV+PKAAND+KLINAGKILENNKTVGQCRVPFG+LP+GVITMHVVVQPTIAKAKT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

XP_038905050.1 membrane-anchored ubiquitin-fold protein 4-like [Benincasa hispida]7.4e-5095.28Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           + E
Subjt:  GATISE

TrEMBL top hitse value%identityAlignment
A0A0A0L887 Membrane-anchored ubiquitin-fold protein1.0e-4994.34Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAK+
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           + E
Subjt:  GATISE

A0A1S3BNL5 Membrane-anchored ubiquitin-fold protein1.2e-4893.4Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLP GVITMHVVVQPTIAKAK 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           + E
Subjt:  GATISE

A0A5A7V1C2 Membrane-anchored ubiquitin-fold protein 45.2e-4997.06Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLP GVITMHVVVQPTIAKAK 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GA
        G+
Subjt:  GA

A0A6J1DS77 Membrane-anchored ubiquitin-fold protein2.0e-4895Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERI+AEWPKDKKV+PKAAND+KLINAGKILENNKTVGQCRVPFG+LP+GVITMHVVVQPTIAKAKT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

A0A6J1ER66 Membrane-anchored ubiquitin-fold protein1.3e-4787.74Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MPDEDLIELKFRLYDGSDIGP+RYSPTSTIA+VKE+IVA+WPKDKKV+PKAAND+KLINAGK+LENNKTVGQCRVPFG+LP+GVITMHVVVQPTIAKAKT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISE
           I E
Subjt:  GATISE

SwissProt top hitse value%identityAlignment
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 39.8e-2962.07Show/hide
Query:  IELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQP
        IE+KFRL+DG+DIGP +Y P++T++ +KE I+A WP+DK++ PK  ND+KLINAG+ILENN+T+ + RVP G++P GVITMHVVV+P
Subjt:  IELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQP

Q7XRU4 Membrane-anchored ubiquitin-fold protein 41.6e-3162.89Show/hide
Query:  EDLIELKFRLYDGSDIGPFRYSP-TSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAK
        ++ +E+KFRL+DGSDIGP R +   +T+A +K+R+VA+WPKDK ++PK ANDVKLI+ GKILEN+K + QCR PFGDLP   ITMHVVVQP+ AK+K
Subjt:  EDLIELKFRLYDGSDIGPFRYSP-TSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAK

Q9LSD8 Membrane-anchored ubiquitin-fold protein 41.7e-4171.03Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MP+EDL+ELKFRLYDGSD+GPF+YSPT+T++M+KERIV+EWPKDKK++PK+A+D+KLINAGKILEN KTV QC+ PF DLPK VITMHVVVQ +  KA+ 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISEE
           I +E
Subjt:  GATISEE

Q9SH14 Membrane-anchored ubiquitin-fold protein 51.1e-2759.41Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCR--VPFGDLPKGVITMHVVVQPTIAKA
        M DEDLIELKFRL DG+DIGP +YS   T+A +KE+I+A+WPKDK+  PK  N+VKLIN GKILENNKT+ + R  +  G+LP  V TMHVV++P + + 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCR--VPFGDLPKGVITMHVVVQPTIAKA

Query:  K
        K
Subjt:  K

Q9SW27 Membrane-anchored ubiquitin-fold protein 32.6e-3768Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MP+E+ I++KFRLYDGSDIGPFRYS  ST+  +K+R+V++WPK K V+PK  N+VKLI++GKILENNKTVGQC+ PFGD+  GVI MHVVVQP++AK+KT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Arabidopsis top hitse value%identityAlignment
AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor1.9e-2755.21Show/hide
Query:  DEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQ-PTIAK
        +ED IELKFRL DG+DIGP +Y+ + T++ +KE+++++WPKDK+  PK  ND+KLINAGKILENN+T+ + R+P  +LP  +ITMH+V++ PT+ K
Subjt:  DEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQ-PTIAK

AT1G77870.1 membrane-anchored ubiquitin-fold protein 5 precursor7.7e-2959.41Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCR--VPFGDLPKGVITMHVVVQPTIAKA
        M DEDLIELKFRL DG+DIGP +YS   T+A +KE+I+A+WPKDK+  PK  N+VKLIN GKILENNKT+ + R  +  G+LP  V TMHVV++P + + 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCR--VPFGDLPKGVITMHVVVQPTIAKA

Query:  K
        K
Subjt:  K

AT3G26980.1 membrane-anchored ubiquitin-fold protein 4 precursor1.2e-4271.03Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MP+EDL+ELKFRLYDGSD+GPF+YSPT+T++M+KERIV+EWPKDKK++PK+A+D+KLINAGKILEN KTV QC+ PF DLPK VITMHVVVQ +  KA+ 
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

Query:  GATISEE
           I +E
Subjt:  GATISEE

AT4G24990.1 Ubiquitin family protein1.8e-3868Show/hide
Query:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT
        MP+E+ I++KFRLYDGSDIGPFRYS  ST+  +K+R+V++WPK K V+PK  N+VKLI++GKILENNKTVGQC+ PFGD+  GVI MHVVVQP++AK+KT
Subjt:  MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKT

AT5G15460.1 membrane-anchored ubiquitin-fold protein 28.0e-2654.26Show/hide
Query:  EDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAK
        +D +E+KFRL DGSDIGP  +   +T+A +KE +VA+WP+DK+  PK   DVKLI+AG+ILENNKTVG CR P G+    V TMHV++Q  + +
Subjt:  EDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGACGAAGATTTGATCGAGCTTAAGTTCCGACTTTATGATGGATCTGATATCGGTCCATTTCGTTATTCCCCAACTTCAACTATAGCGATGGTTAAGGAGAGAAT
TGTTGCAGAGTGGCCTAAAGATAAGAAAGTCATACCCAAGGCAGCAAATGACGTAAAACTGATCAATGCTGGCAAAATTTTAGAAAACAACAAGACTGTTGGTCAATGTC
GAGTGCCTTTCGGGGATCTCCCTAAAGGAGTTATTACTATGCATGTCGTGGTGCAGCCAACTATAGCAAAAGCAAAAACAGGTGCTACAATATCAGAGGAAAATGTTGGA
ATCAAGTGGGCAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGACGAAGATTTGATCGAGCTTAAGTTCCGACTTTATGATGGATCTGATATCGGTCCATTTCGTTATTCCCCAACTTCAACTATAGCGATGGTTAAGGAGAGAAT
TGTTGCAGAGTGGCCTAAAGATAAGAAAGTCATACCCAAGGCAGCAAATGACGTAAAACTGATCAATGCTGGCAAAATTTTAGAAAACAACAAGACTGTTGGTCAATGTC
GAGTGCCTTTCGGGGATCTCCCTAAAGGAGTTATTACTATGCATGTCGTGGTGCAGCCAACTATAGCAAAAGCAAAAACAGGTGCTACAATATCAGAGGAAAATGTTGGA
ATCAAGTGGGCAGGTTGA
Protein sequenceShow/hide protein sequence
MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKTGATISEENVG
IKWAG