; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002862 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002862
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-H2 finger protein ATL8
Genome locationChr11:14827308..14827856
RNA-Seq ExpressionHG10002862
SyntenyHG10002862
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637404.1 hypothetical protein CSA_023381 [Cucumis sativus]6.4e-8085.48Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ + +AL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPA  QGG AHNNEEEE E      +NNRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP

XP_004146217.1 RING-H2 finger protein ATL80 [Cucumis sativus]2.0e-8187.1Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPA  QGG AHNNEEEE E      +NNRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP

XP_008449155.1 PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]5.2e-8289.07Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPAV QGGAA NNEEEE E  +N NRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]1.0e-7782.05Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG
        MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG   G AGNQASANRGLKKKILQSLPKF Y++  SGGEG
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG

Query:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILV ARCQKCG+FPAV  GG  HNNEEE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP

XP_038904164.1 RING-H2 finger protein ATL80-like [Benincasa hispida]6.8e-9093.96Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        MTRYIRALA NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKF+YKS+GGEGKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILV ARCQKCGQFPAV QGGAAHNN    EEVEDNNRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein9.6e-8287.1Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPA  QGG AHNNEEEE E      +NNRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEE----VEDNNRGLGFLP

A0A1S3BKT0 RING-H2 finger protein ATL802.5e-8289.07Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPAV QGGAA NNEEEE E  +N NRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP

A0A5D3CJ22 RING-H2 finger protein ATL802.5e-8289.07Show/hide
Query:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL
        M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     GNQASANRGLKKKILQSLPKFRYKS+ G+GKIAAECAICL
Subjt:  MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICL

Query:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP
        AEFLEGEEIRQLPQCGHCFHVSCVDTWLG+HSSCPSCRQILV ARCQKCGQFPAV QGGAA NNEEEE E  +N NRGLGFLP
Subjt:  AEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDN-NRGLGFLP

A0A6J1F5B4 RING-H2 finger protein ATL83.2e-7781.54Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG
        MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG AGNQASANRGLKKKILQSLPKF Y++  SGGE 
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG

Query:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILV ARCQKCG+FPAV  GG  HN+EEE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP

A0A6J1I6T7 RING-H2 finger protein ATL86.5e-7882.05Show/hide
Query:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG
        MTRY++ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRG  GG AGNQASANRGLKKKILQSLPKF Y++  SGGEG
Subjt:  MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG--GGSAGNQASANRGLKKKILQSLPKFRYKS--SGGEG

Query:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP
        K AAECAICLAEFL+GEEIRQLPQCGHCFHVSCVDTWL SHSSCPSCRQILV ARCQKCG FPAV  G   HNNEEE++  ED   NNRGLGFLP
Subjt:  KIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVED---NNRGLGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL442.0e-3951.69Show/hide
Query:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAA--
        MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR   + G+  S N+GLKKK LQSLP+  + ++      AA  
Subjt:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAA--

Query:  ----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEE
            ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Subjt:  ----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEE

Q8LC69 RING-H2 finger protein ATL85.0e-4351.05Show/hide
Query:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ------ASANRGLKKKILQSLPKFRYKSSGGEGKI
        M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q      A+AN+GLKKK+L+SLPK  Y       + 
Subjt:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ------ASANRGLKKKILQSLPKFRYKSSGGEGKI

Query:  AAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP
          ECAICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILV  RC KCG  P     G++ +  E +  ++    G   LP
Subjt:  AAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP

Q9LM69 RING-H2 finger protein ATL801.4e-4554.5Show/hide
Query:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASANRGLKKKILQSLPKFRY
        M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   +AGN+              A+AN+GLKKK+LQSLPK  +
Subjt:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASANRGLKKKILQSLPKFRY

Query:  KSSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVE
             E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILV ARC KCG  P     G++ +  E E E+E
Subjt:  KSSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVE

Q9LZV8 RING-H2 finger protein ATL749.4e-2653.23Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASA----NRGLKKKILQSLPKFRYKSSGGEGKIAA-ECAICLAEFLEGEEIRQLPQCGHC
        +++ V+ILAALLCALI  +GL ++ RCA +R G G + + A+       GLKK+ L+  P   Y S  GE KIAA ECAICL EF +GE +R LP C H 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASA----NRGLKKKILQSLPKFRYKSSGGEGKIAA-ECAICLAEFLEGEEIRQLPQCGHC

Query:  FHVSCVDTWLGSHSSCPSCRQILV
        FH+SC+DTWL SHSSCP+CR  L+
Subjt:  FHVSCVDTWLGSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL451.4e-4052.84Show/hide
Query:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFRYK-----------
        MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    + G     N+GLKKK LQ+LPK  Y            
Subjt:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFRYK-----------

Query:  ---SSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQ
           SS G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Subjt:  ---SSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQ

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein1.0e-4654.5Show/hide
Query:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASANRGLKKKILQSLPKFRY
        M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   +AGN+              A+AN+GLKKK+LQSLPK  +
Subjt:  MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASANRGLKKKILQSLPKFRY

Query:  KSSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVE
             E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILV ARC KCG  P     G++ +  E E E+E
Subjt:  KSSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVE

AT1G76410.1 RING/U-box superfamily protein3.5e-4451.05Show/hide
Query:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ------ASANRGLKKKILQSLPKFRYKSSGGEGKI
        M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q      A+AN+GLKKK+L+SLPK  Y       + 
Subjt:  MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ------ASANRGLKKKILQSLPKFRYKSSGGEGKI

Query:  AAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP
          ECAICL EF  G+E+R LPQCGH FHVSC+DTWLGSHSSCPSCRQILV  RC KCG  P     G++ +  E +  ++    G   LP
Subjt:  AAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP

AT2G17450.1 RING-H2 finger A3A1.4e-4051.69Show/hide
Query:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAA--
        MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR   + G+  S N+GLKKK LQSLP+  + ++      AA  
Subjt:  MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAA--

Query:  ----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEE
            ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Subjt:  ----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEE

AT4G35480.1 RING-H2 finger A3B9.6e-4252.84Show/hide
Query:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFRYK-----------
        MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G    + G     N+GLKKK LQ+LPK  Y            
Subjt:  MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFRYK-----------

Query:  ---SSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQ
           SS G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Subjt:  ---SSGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQ

AT5G01880.1 RING/U-box superfamily protein6.7e-2753.23Show/hide
Query:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASA----NRGLKKKILQSLPKFRYKSSGGEGKIAA-ECAICLAEFLEGEEIRQLPQCGHC
        +++ V+ILAALLCALI  +GL ++ RCA +R G G + + A+       GLKK+ L+  P   Y S  GE KIAA ECAICL EF +GE +R LP C H 
Subjt:  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASA----NRGLKKKILQSLPKFRYKSSGGEGKIAA-ECAICLAEFLEGEEIRQLPQCGHC

Query:  FHVSCVDTWLGSHSSCPSCRQILV
        FH+SC+DTWL SHSSCP+CR  L+
Subjt:  FHVSCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTATATCAGAGCTCTTGCCGCCAATACTTCGTCGGCGCCTCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTGCTGTGTGC
CCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGTGCGTGGCTCCGCCGTGGGGGGGGAAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGA
TCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGAGCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAAGGGGAGGAGATCCGG
CAGCTGCCGCAGTGTGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGGTCCCATTCCTCATGCCCTTCTTGCCGTCAGATTCTGGTAGGGGCCAGATGCCA
GAAGTGCGGGCAGTTTCCGGCCGTGGGGCAAGGCGGCGCTGCTCACAACAACGAGGAGGAGGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTATATCAGAGCTCTTGCCGCCAATACTTCGTCGGCGCCTCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTGCTGTGTGC
CCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGTGCGTGGCTCCGCCGTGGGGGGGGAAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGA
TCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGAGCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAAGGGGAGGAGATCCGG
CAGCTGCCGCAGTGTGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGGTCCCATTCCTCATGCCCTTCTTGCCGTCAGATTCTGGTAGGGGCCAGATGCCA
GAAGTGCGGGCAGTTTCCGGCCGTGGGGCAAGGCGGCGCTGCTCACAACAACGAGGAGGAGGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA
Protein sequenceShow/hide protein sequence
MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFRYKSSGGEGKIAAECAICLAEFLEGEEIR
QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVGARCQKCGQFPAVGQGGAAHNNEEEEEEVEDNNRGLGFLP