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HG10002887 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002887
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationChr11:15092283..15092465
RNA-Seq ExpressionHG10002887
SyntenyHG10002887
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AVE14547.1 ribosomal protein L33 [Angelica tsinlingensis]4.2e-1276.47Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        +E+L ESK Q RFMAKGKD RVTVILECT+C +N VNKES  ISRYITQKN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

QJF46404.1 ribosomal protein L33 [Cucumis melo]7.4e-1792.16Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L ESKIQGRFMAKGKDARVTVILECT CVRNGVNKESI ISRYITQKN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

THU43257.1 hypothetical protein C4D60_Mb00t07720 [Musa balbisiana]2.1e-1176.47Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        +E+L  SKIQ RFMAKGKD RV VILECT C RN VNKES  ISRYITQKN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

YP_009387580.1 ribosomal protein L33 [Hansenia weberbaueriana]7.2e-1276.47Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L +SKIQ  FMAKGKD R+TVILECT CVRNGVNK S  ISRYIT+KN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

YP_009387665.1 ribosomal protein L33 [Hansenia forbesii]8.5e-1378.43Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L +SKIQG FMAKGKD R+TVILECT CVRNGVNK S  ISRYIT+KN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

TrEMBL top hitse value%identityAlignment
A0A1Y0B5C5 50S ribosomal protein L33, chloroplastic4.1e-1378.43Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L +SKIQG FMAKGKD R+TVILECT CVRNGVNK S  ISRYIT+KN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

A0A1Y0B5V8 50S ribosomal protein L33, chloroplastic4.1e-1378.43Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L +SKIQG FMAKGKD R+TVILECT CVRNGVNK S  ISRYIT+KN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

A0A2L1K1C1 50S ribosomal protein L33, chloroplastic2.0e-1276.47Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        +E+L ESK Q RFMAKGKD RVTVILECT+C +N VNKES  ISRYITQKN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

A0A6M3W1I6 50S ribosomal protein L33, chloroplastic3.6e-1792.16Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L ESKIQGRFMAKGKDARVTVILECT CVRNGVNKESI ISRYITQKN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

A0A7S9EXC0 Ribosomal protein L334.1e-1378.43Show/hide
Query:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        ME+L +SKIQG FMAKGKD R+TVILECT CVRNGVNK S  ISRYIT+KN
Subjt:  MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

SwissProt top hitse value%identityAlignment
A6MM57 50S ribosomal protein L33, chloroplastic1.3e-1186.84Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKD RV VILECT CVRNGVNKES+ ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

B1A956 50S ribosomal protein L33, chloroplastic2.6e-1289.47Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKDARVT+ILECT CVRNGVNKES  ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

Q1KXT8 50S ribosomal protein L33, chloroplastic2.8e-1184.21Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKDAR+ V+LECT CVRNGVNKES  ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

Q2QD68 50S ribosomal protein L33, chloroplastic8.8e-1392.11Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKDARVTVILECT CVRNGVNK+SI ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

Q3V514 50S ribosomal protein L33, chloroplastic7.4e-1289.47Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKDAR+TVILECT CVRNGVNKES  ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN

Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L334.9e-1176.32Show/hide
Query:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN
        MAKGKD RVT+ILECT CVRN + KE+  ISRYITQKN
Subjt:  MAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGTTGCATGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCATTGTGTTCGAAACGGTGTTAA
TAAGGAATCAATCGAGATATCCAGATATATTACTCAAAAGAATCACACAATACGCCTAGTCGATTGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGTTGCATGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCATTGTGTTCGAAACGGTGTTAA
TAAGGAATCAATCGAGATATCCAGATATATTACTCAAAAGAATCACACAATACGCCTAGTCGATTGGAATTGA
Protein sequenceShow/hide protein sequence
MEQLHESKIQGRFMAKGKDARVTVILECTHCVRNGVNKESIEISRYITQKNHTIRLVDWN