CuGenDBv2

Gene ID	HG10002898
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA-directed RNA polymerase subunit
Genome location	Chr11:15189957..15198025
RNA-Seq Expression	HG10002898
Synteny	HG10002898
Gene Ontology terms	GO:0006366 - transcription by RNA polymerase II (biological process) GO:0005665 - RNA polymerase II, core complex (cellular component) GO:0001055 - RNA polymerase II activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR007073 - RNA polymerase Rpb1, domain 7 IPR044893 - RNA polymerase Rpb1, clamp domain superfamily IPR042102 - RNA polymerase Rpb1, domain 3 superfamily IPR038593 - RNA polymerase Rpb1, domain 7 superfamily IPR038120 - RNA polymerase Rpb1, funnel domain superfamily IPR007083 - RNA polymerase Rpb1, domain 4 IPR007081 - RNA polymerase Rpb1, domain 5 IPR007080 - RNA polymerase Rpb1, domain 1 IPR007075 - RNA polymerase Rpb1, domain 6 IPR007066 - RNA polymerase Rpb1, domain 3 IPR006592 - RNA polymerase, N-terminal IPR000722 - RNA polymerase, alpha subunit IPR000684 - RNA polymerase II, heptapeptide repeat, eukaryotic

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052935.1 DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]

0.0e+00

91.18

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Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK
                                                           ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVK
Subjt:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK

Query:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
        KSRGGCGAQQPKI+I+GMKMTAEYKAQRKKNDDQEQLPEPVERKQTL+AERVLGILKRITD+DCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
Subjt:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS

Query:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
        SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
Subjt:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP

Query:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------
        DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                       
Subjt:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------

Query:  -----------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN
                   IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN
Subjt:  -----------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN

Query:  ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAAR
        ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH+ESETG +TPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAAR
Subjt:  ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAAR

Query:  KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL
        KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL
Subjt:  KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL

Query:  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK
        KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK
Subjt:  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK

Query:  AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL
        AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL
Subjt:  AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL

Query:  GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF
        GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF
Subjt:  GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF

Query:  EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT
        EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT
Subjt:  EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT

Query:  LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN
        LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN
Subjt:  LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN

Query:  DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI
        DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI
Subjt:  DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI

Query:  EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC
        EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC
Subjt:  EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC

Query:  ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS
        ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS
Subjt:  ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS

Query:  PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA
        PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA
Subjt:  PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA

Query:  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP
        YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP
Subjt:  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP

Query:  SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
Subjt:  SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

TYK11392.1 DNA-directed RNA polymerase II subunit 1 [Cucumis melo var. makuwa]

0.0e+00

91.37

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Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK
                                                           ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVK
Subjt:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK

Query:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
        KSRGGCGAQQPKI+I+GMKMTAEYKAQRKKNDDQEQLPEPVERKQTL+AERVLGILKRITD+DCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
Subjt:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS

Query:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
        SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
Subjt:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP

Query:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------
        DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                       
Subjt:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------

Query:  -------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW
               IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW
Subjt:  -------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW

Query:  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG
        WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH+ESETG +TPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG
Subjt:  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG

Query:  HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV
        HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV
Subjt:  HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV

Query:  TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
        TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Subjt:  TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED

Query:  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI
        IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI
Subjt:  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI

Query:  ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI
        ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI
Subjt:  ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI

Query:  GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV
        GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV
Subjt:  GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV

Query:  TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP
        TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP
Subjt:  TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP

Query:  KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR
        KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR
Subjt:  KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR

Query:  RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL
        RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL
Subjt:  RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL

Query:  NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS
        NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS
Subjt:  NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS

Query:  PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT
        PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT
Subjt:  PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT

Query:  SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY
        SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY
Subjt:  SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY

Query:  SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
Subjt:  SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

XP_004146161.3 DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]

0.0e+00

93.04

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Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVKKSRGGCGAQQPKISI+GMKMTAEYKAQRKKNDD E
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTL+AERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        LTRTSAWH+ESETG ITPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
        SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAY PSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Subjt:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN

Query:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN
        TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN
Subjt:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN

XP_022145356.1 DNA-directed RNA polymerase II subunit 1 [Momordica charantia]

0.0e+00

92.39

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        ED KFKQALRIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQES+QPVKK RGGCGAQQPKISIDGMKM AEYKAQRKKNDDQE
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTLSAERVLG+LKRI+DEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        LTRTSAWHAESETGFITPGDTFVRIEKGEL++GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        IS AKNEVKNLIKKAQERSLEPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR+QLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATL FNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        +P+KISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDE EGFKPEMEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
        SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Subjt:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN

Query:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        TGPSP++SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTS+KDDRSRKDDR+NR
Subjt:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

XP_038904743.1 DNA-directed RNA polymerase II subunit RPB1 [Benincasa hispida]

0.0e+00

92.72

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        +D KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQP KK RGGCGAQQPKI+I+GMKMTAEYK QRKKNDDQE
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTL+AERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        LTRTSAWH+ESETGFITPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
        SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Subjt:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN

Query:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
Subjt:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L655 DNA-directed RNA polymerase subunit

0.0e+00

92.34

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVKKSRGGCGAQQPKISI+GMKMTAEYKAQRKKNDD E
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTL+AERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        LTRTSAWH+ESETG ITPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA--------------YSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA              YSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA--------------YSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY
        SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAY PSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY
Subjt:  SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY

Query:  SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN
        SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN
Subjt:  SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN

A0A5A7UGR7 DNA-directed RNA polymerase subunit

0.0e+00

91.18

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK
                                                           ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVK
Subjt:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK

Query:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
        KSRGGCGAQQPKI+I+GMKMTAEYKAQRKKNDDQEQLPEPVERKQTL+AERVLGILKRITD+DCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
Subjt:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS

Query:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
        SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
Subjt:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP

Query:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------
        DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                       
Subjt:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------

Query:  -----------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN
                   IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN
Subjt:  -----------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMN

Query:  ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAAR
        ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH+ESETG +TPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAAR
Subjt:  ILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAAR

Query:  KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL
        KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL
Subjt:  KFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNL

Query:  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK
        KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK
Subjt:  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK

Query:  AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL
        AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL
Subjt:  AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQL

Query:  GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF
        GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF
Subjt:  GTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAF

Query:  EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT
        EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT
Subjt:  EWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTT

Query:  LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN
        LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN
Subjt:  LRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN

Query:  DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI
        DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI
Subjt:  DEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGI

Query:  EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC
        EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC
Subjt:  EAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGC

Query:  ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS
        ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS
Subjt:  ALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS

Query:  PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA
        PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA
Subjt:  PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA

Query:  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP
        YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP
Subjt:  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSP

Query:  SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
Subjt:  SSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

A0A5D3CJC8 DNA-directed RNA polymerase subunit

0.0e+00

91.37

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK
                                                           ED KFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQ+SDQPVK
Subjt:  ---------------------------------------------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVK

Query:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
        KSRGGCGAQQPKI+I+GMKMTAEYKAQRKKNDDQEQLPEPVERKQTL+AERVLGILKRITD+DCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
Subjt:  KSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS

Query:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
        SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP
Subjt:  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITP

Query:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------
        DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                       
Subjt:  DPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG-----------------------

Query:  -------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW
               IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW
Subjt:  -------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW

Query:  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG
        WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH+ESETG +TPGDTFVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG
Subjt:  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG

Query:  HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV
        HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV
Subjt:  HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV

Query:  TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
        TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Subjt:  TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED

Query:  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI
        IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI
Subjt:  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEI

Query:  ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI
        ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI
Subjt:  ATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVI

Query:  GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV
        GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV
Subjt:  GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV

Query:  TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP
        TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP
Subjt:  TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAP

Query:  KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR
        KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR
Subjt:  KGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR

Query:  RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL
        RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL
Subjt:  RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL

Query:  NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS
        NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS
Subjt:  NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS

Query:  PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT
        PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT
Subjt:  PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT

Query:  SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY
        SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY
Subjt:  SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY

Query:  SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
Subjt:  SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

A0A6J1CV04 DNA-directed RNA polymerase subunit

0.0e+00

92.39

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        ED KFKQALRIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQES+QPVKK RGGCGAQQPKISIDGMKM AEYKAQRKKNDDQE
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTLSAERVLG+LKRI+DEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        LTRTSAWHAESETGFITPGDTFVRIEKGEL++GTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        IS AKNEVKNLIKKAQERSLEPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR+QLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATL FNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        +P+KISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDE EGFKPEMEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
        SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Subjt:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN

Query:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        TGPSP++SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTS+KDDRSRKDDR+NR
Subjt:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

A0A6J1ELE9 DNA-directed RNA polymerase subunit

0.0e+00

92.13

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MDLRFPYSPAEVAKVRMVQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE
                        ED KFKQA+RIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQ+SDQPVK+ RGGCGAQQPKISIDGMKM AEYKAQRKKNDDQE
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQE

Query:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
        QLPEPVERKQTLSAERVLG+LKRI+D+DCKLLGLNPKYARPD MILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Subjt:  QLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS

Query:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
        EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE
Subjt:  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKE

Query:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM
        LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG                              IKIMPYSTFRLNLSVTSPYNADFDGDEM
Subjt:  LVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEM

Query:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
        NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Subjt:  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN

Query:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
        L+RTSAWH+ESE+GFITPGDTFVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET
Subjt:  LTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINET

Query:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
        ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR
Subjt:  ISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDR

Query:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
        TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Subjt:  TLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK

Query:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
        LDSLKMKKKEFERIFRYEFEDENWKP+YMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM
Subjt:  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDM

Query:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
        HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL
Subjt:  HPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTL

Query:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI
        NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEI
Subjt:  NTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI

Query:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN
        APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDIN
Subjt:  APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDIN

Query:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
        KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH
Subjt:  KVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGH

Query:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
        LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL+FGMTPSRSPISGTP
Subjt:  LMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP

Query:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
        YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS
Subjt:  YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS

Query:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
        PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
Subjt:  PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT

Query:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
        SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Subjt:  SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN

Query:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR
        TG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT+DKDDRSRKDDR+NR
Subjt:  TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

SwissProt top hits

e value

%identity

Alignment

P08775 DNA-directed RNA polymerase II subunit RPB1

0.0e+00

58.56

Show/hide

Query:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR
        PK RL  + D CK K  CEGG+E+D    V+  E D+ +  +K  GGCG  QP+I   G+++ AE+K     N+D +      E+K  LS ERV  I KR
Subjt:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR

Query:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR
        I+DE+C +LG+ P+YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH+I+E  +LLQFH+AT  DNELPGLPR
Subjt:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR

Query:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG
        A Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDFSARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKYIIRD+G
Subjt:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG

Query:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC
         R+DLR+  K SD HL+ G                              ++I+P+STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ 
Subjt:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC

Query:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG
        IV+PQSNRPVMGIVQDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP  IN  RT + H + E       I+PG
Subjt:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG

Query:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS
        DT V +E GEL+ G LCKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+KA    
Subjt:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS

Query:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
        LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVE
Subjt:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE

Query:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF
        NSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++
Subjt:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF

Query:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV
         +E      +  + V+D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L ++L +V
Subjt:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV

Query:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
         G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPR
Subjt:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR

Query:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM
        L+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M
Subjt:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM

Query:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----
         D+KL+M  IAEKIN  F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +      
Subjt:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----

Query:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR
          E+  FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR
Subjt:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR

Query:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----
         DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL         FG  P  SP+ G     
Subjt:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----

Query:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP
        TP+++G        SP++                                   SP S    SPY+   G A SP+ SP           GY+P SP YSP
Subjt:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP

Query:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS
        +SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTS
Subjt:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS

Query:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA
        P+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTSP Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  
Subjt:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA

Query:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK
        Y+PSSP  SPSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P YSP+S   YTP TS K
Subjt:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK

P11414 DNA-directed RNA polymerase II subunit RPB1

0.0e+00

58.56

Show/hide

Query:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR
        PK RL  + D CK K  CEGG+E+D    V+  E D+ +  +K  GGCG  QP+I   G+++ AE+K     N+D +      E+K  LS ERV  I KR
Subjt:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR

Query:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR
        I+DE+C +LG+ P+YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH+I+E  +LLQFH+AT  DNELPGLPR
Subjt:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR

Query:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG
        A Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDFSARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKYIIRD+G
Subjt:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG

Query:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC
         R+DLR+  K SD HL+ G                              ++I+P+STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ 
Subjt:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC

Query:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG
        IV+PQSNRPVMGIVQDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP  IN  RT + H + E       I+PG
Subjt:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG

Query:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS
        DT V +E GEL+ G LCKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+KA    
Subjt:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS

Query:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
        LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVE
Subjt:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE

Query:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF
        NSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++
Subjt:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF

Query:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV
         +E      +  + V+D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L ++L +V
Subjt:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV

Query:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
         G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPR
Subjt:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR

Query:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM
        L+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M
Subjt:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM

Query:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----
         D+KL+M  IAEKIN  F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +      
Subjt:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----

Query:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR
          E+  FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR
Subjt:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR

Query:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----
         DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL         FG  P  SP+ G     
Subjt:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----

Query:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP
        TP+++G        SP++                                   SP S    SPY+   G A SP+ SP           GY+P SP YSP
Subjt:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP

Query:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS
        +SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTS
Subjt:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS

Query:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA
        P+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTSP Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  
Subjt:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA

Query:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK
        Y+PSSP  SPSSP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P YSP+S   YTP TS K
Subjt:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK

P18616 DNA-directed RNA polymerase II subunit RPB1

0.0e+00

82.44

Show/hide

Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MD RFP+SPAEV+KVR+VQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEI-DVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQ
                        E+ KFKQA++IKNPKNRL+KILDACKNKTKC+GGD+I DVQ   +D+PVKKSRGGCGAQQPK++I+GMKM AEYK QRKKND+ 
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEI-DVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQ

Query:  EQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII
        +QLPEP ERKQTL A+RVL +LKRI+D DC+LLG NPK+ARPDWMIL+VLPIPPPPVRPSVMMD +SRSEDDLTHQLAMIIRHNENL+RQE+NG+PAHII
Subjt:  EQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII

Query:  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK
        SEF QLLQFHIATYFDNELPG PRATQ+SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK
Subjt:  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK

Query:  ELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDE
        ELV+YGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELG                              I+IMPYSTFRLNLSVTSPYNADFDGDE
Subjt:  ELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDE

Query:  MNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI
        MNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQI
Subjt:  MNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI

Query:  NLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
        NL R SAWHA++ETGFITPGDT VRIE+GELL GTLCKK LGTS GSL+HVIWEEVGPDAARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINE
Subjt:  NLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE

Query:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID
        TIS AK  VK+LI++ Q + L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF  
Subjt:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID

Query:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
        RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Subjt:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ

Query:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
        KLDSLKMKK EF+R F+YE +DENW P Y+  EH+EDLK IRE R+VF+AE  KLE DR+QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SD
Subjt:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD

Query:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
        MHP+EIV+A+DKLQERL VVPG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
Subjt:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT

Query:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE
        LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED +FV+SYYEMPDE+
Subjt:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE

Query:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
        ++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRIMNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Subjt:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI

Query:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG
        NKVFIK  + ++FDE  GFK   EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDGSYVNYRHLAILCDTMTYRG
Subjt:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG

Query:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT
        HLMAITRHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLPSY+DGL+FGMTP+RSP+SGT
Subjt:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT

Query:  PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
        PYHEGMMSPNYLLSPN+RLSP+SDAQFSPYVGGMAFSP+       SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Subjt:  PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY

Query:  SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
        SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
Subjt:  SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP

Query:  TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPY
        TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSP+YSPSSPTYSPSSPY
Subjt:  TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPY

Query:  NTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDD
        ++G SPD       YSPSAGYSPT PGYSPSST QYTP   DK D++ K D
Subjt:  NTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDD

P24928 DNA-directed RNA polymerase II subunit RPB1

0.0e+00

58.51

Show/hide

Query:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR
        PK RL  + D CK K  CEGG+E+D    V+  E D+ +  +K  GGCG  QP+I   G+++ AE+K     N+D +      E+K  LS ERV  I KR
Subjt:  PKNRLRKILDACKNKTKCEGGDEID----VQGQESDQPV--KKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGILKR

Query:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR
        I+DE+C +LG+ P+YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH+I+E  +LLQFH+AT  DNELPGLPR
Subjt:  ITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPR

Query:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG
        A Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDFSARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKYIIRD+G
Subjt:  ATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDG

Query:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC
         R+DLR+  K SD HL+ G                              ++I+P+STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ 
Subjt:  QRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC

Query:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG
        IV+PQSNRPVMGIVQDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP  IN  RT + H + E       I+PG
Subjt:  IVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETG----FITPG

Query:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS
        DT V +E GEL+ G LCKK+LGTS GSL+H+ + E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+KA    
Subjt:  DTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS

Query:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE
        LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVE
Subjt:  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVE

Query:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF
        NSYL GLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+    +E Q L +LK   K FE+ FR+++
Subjt:  NSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEF

Query:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV
         +E      +  + V+D+ +    +N  E E +++  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L ++L +V
Subjt:  EDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV

Query:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR
         G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPR
Subjt:  PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPR

Query:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM
        L+E+IN++K+ KTPSL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YYEMPD ++A  +ISPWLLR+EL+R+ M
Subjt:  LREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMM

Query:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----
         D+KL+M  IAEKIN  F DDL CIFNDDNAEKL+LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +      
Subjt:  VDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNK-----

Query:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR
          E+  FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR
Subjt:  FDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINR

Query:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----
         DTGP+M+CSFEETVD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL         FG  P  SP+ G     
Subjt:  NDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLD--------FGMTPSRSPISG-----

Query:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP
        TP+++G        SP++                                   SP S    SPY+   G A SP+ SP           GY+P SP YSP
Subjt:  TPYHEGMMSPNYLLSPNLRL---------------------------------SPISDAQFSPYV--GGMAFSPTSSP-----------GYSPSSPGYSP

Query:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS
        +SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTS
Subjt:  SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS

Query:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA
        P+YSPTSP+YSPTSPSYSPTSPSYSPTSP+YSPTSP+Y+PTSPSYSPTSPSYSPTSP Y+PTSP YSPTSPSYSPTSPSYSPTSPSY+P S +Y+P S  
Subjt:  PAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP-SQA

Query:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK
        Y+PSSP  SPSSP YSP SP Y+PTSPSYSP+SP Y+P+SP YSP+SP  +  SP YSP+SP YSP+   YSPT+P YSP+S   YTP TS K
Subjt:  YSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSA-GYSPTAPGYSPSSTSQYTPQTSDK

P35084 DNA-directed RNA polymerase II subunit rpb1

0.0e+00

62.92

Show/hide

Query:  EIEDAKFKQALRIKNPKNRLRKILDACKNKTKCE-GGDE-----IDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVER
        +  +  F+QAL+I+N K+RL  ++D CKNK  C  GG+E     +    +E D+PVK   GGCG   PKI+ + +K+  E+K         +   E +E+
Subjt:  EIEDAKFKQALRIKNPKNRLRKILDACKNKTKCE-GGDE-----IDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQEQLPEPVER

Query:  KQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQF
        K  LSAERVL ILKRI DED + +G+NP +AR DWMI  VLP+PPPPVRPS+MMDTS+R EDDLTH+LA I++ N  L+RQE+NG+PAHII+E  Q LQF
Subjt:  KQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQF

Query:  HIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHP
        H+ATY DNE+PGLP+A QRSGRP+KSI  RLK KEGRIRGNLMGKRVDFSARTVIT DP ++ID++GVP SIALNLTYPETVTP+NI++++EL+  GP  
Subjt:  HIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHP

Query:  PPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSF
         P   GAKYIIR+DG R DLR++KK SD HLE G                              IK+MPYSTFRLNLSVTSPYNADFDGDEMN+HVPQ+ 
Subjt:  PPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSF

Query:  ETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH
        ETRAEV+E+MMVP+ IVSPQSNRPVMGIVQDTLLG R  TKRD F+ KD+ MNILMW   +DGK+P PAILKP+ LWTGKQ+F+LIIP  INL R ++ H
Subjt:  ETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWH

Query:  AESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEV
         + E    + GDT V IE+GELL G LCK++LG + GS+IHV+  E G D  R F+  TQ +VN+WL+   F++GIGDTIAD+ATM K+  TIS+AKN+V
Subjt:  AESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEV

Query:  KNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKD
        K LI KAQ +  E +PG++++++FE KVNQVLNKARD AGSSAQ SLSE NNLKAMVTAGSKGSFINISQM ACVGQQNVEGKRIPFGF  RTLPHFTKD
Subjt:  KNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKD

Query:  DYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK
        DYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED+ +KYD TVRNSLGDVIQF YGEDG+D  ++E+Q +DSL+   
Subjt:  DYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKK

Query:  KEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEA
         E ER++R++ +  ++   +M P  +E ++     R+  E E +++++DR  L  EI  +GE +WP+PVNL+RLI NAQK F ID RR SD++P  +V  
Subjt:  KEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEA

Query:  IDKLQERLKVVPGEDPLS---------VEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
        I+KL  RLK++   D             E   NAT+ F+IL+RSTFASKRVL E+RLT +AF WV GEIES+FLQ+L  PGEM+G +AAQSIGEPATQMT
Subjt:  IDKLQERLKVVPGEDPLS---------VEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT

Query:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE
        LNTFHYAGVS+KNVTLGVPRL+EIIN+AK++KTPSL++YLKP   +  +RAK V+  LEYTTL +VT ATE++YDPDP +TII ED +FV SY+E+PDEE
Subjt:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE

Query:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
        I    +SPWLLRIEL+R M+ DKKL+MA+I + +  +F   L CIF+DDNAEKLILRIR++  +  KG   D   +DD FL++IESNML+EM LRGI  I
Subjt:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI

Query:  NKVFIKC-GKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYR
         KVF++   K+ K  EN GF    EW+LDT+GV+LL VM H DVD  RTTSN ++E+I+VLGIEAVR +LL ELR VISFDGSYVNYRHLAIL D MTYR
Subjt:  NKVFIKC-GKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYR

Query:  GHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP-----SYIDGLDFGMTPSR
        GHLMAITRHGINR +TGP+MRCSFEETV+IL+DAA+++ETD ++GVTENI+LGQL P+GTG   ++LN +M+KNA  + LP     SY D      TPS 
Subjt:  GHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP-----SYIDGLDFGMTPSR

Query:  SPISG--TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG
        S   G  TP+H    +P         LSP ++     + G  + S  +SPGY+ ++  Y  SS  Y P SP YSPTSP YSPTSP YSPTSP+YSP+SP 
Subjt:  SPISG--TPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG

Query:  YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
        YSPTSP+YSPTSPSYSPTSP YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTSP+YSPTSP+YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
Subjt:  YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS

Query:  PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTS
        PTSPSYSP+SPSYSP+SP+YSP+SP YSP+SP+++    +Y P +
Subjt:  PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTS

Arabidopsis top hits

e value

%identity

Alignment

AT3G57660.1 nuclear RNA polymerase A1

2.9e-103

25.67

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Query:  KAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRI---TDEDCKLLG----LNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH
        K  R+K+ +     E    K+ L    V  ILK +     E C  +G       +        L+ + +PP   RP       S  E   T  L  +I  
Subjt:  KAQRKKNDDQEQLPEPVERKQTLSAERVLGILKRI---TDEDCKLLG----LNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH

Query:  NENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIAL
        N  L     N      +    + LQ  +   FD++      AT +S R    IC  L+ KEG  R  +MGKRV+ + R+VI+PDP I ++++G+P   AL
Subjt:  NENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIAL

Query:  NLTYPETVTPYNIERLKELVEYGPHPPPGKT--------------------------GAKYIIRDDGQRLDLRYLKKSSDHHLELG--------------
         LTYPE VTP+N+E+L+E +  GP   PG T                           ++    + G+  D+ +  K+   H+  G              
Subjt:  NLTYPETVTPYNIERLKELVEYGPHPPPGKT--------------------------GAKYIIRDDGQRLDLRYLKKSSDHHLELG--------------

Query:  ------IKIMP-YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNIL--
              ++++    T RL+ +  S YNADFDGDEMN+H PQ   +RAE   ++        P +  P+  ++QD ++    +TKRDTF+ KD F  +L  
Subjt:  ------IKIMP-YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNIL--

Query:  -----MWWEDFDGK---------------IPAPAILKPQPLWTGKQVFNLIIPK----------------QINLTRTSAWHAESETGFITP---------
             M    F G+                  PAILKP PLWTGKQV   ++ +                 ++  +  +   +  +G +T          
Subjt:  -----MWWEDFDGK---------------IPAPAILKPQPLWTGKQVFNLIIPK----------------QINLTRTSAWHAESETGFITP---------

Query:  ---GDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKA
            +  + I K E + G + K     +   L+H + E  G +AA   L     L   +L  + F+ G+ D I      E+  + +   +N  + +++K 
Subjt:  ---GDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKA

Query:  ----QERSLEPEPGRTMMD----------------SFENKVNQVLNK-ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP
             +  ++P+  R+ ++                S  N +NQ  +K   +D  S         N +  M  +G+KGS +N  Q+++ +GQQ++EGKR+P
Subjt:  ----QERSLEPEPGRTMMD----------------SFENKVNQVLNK-ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP

Query:  FGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAV
             +TLP F   D+ P + GF+ + +L GL PQE++FH M GREGL+DTAVKTS +GY+QR L+K +E + V YD TVR++ G +IQF YGEDG+D  
Subjt:  FGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAV

Query:  WIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW--PMPVNLKRLIQNAQKTFKI
                            F  +F++     + +L +  ED+                              +G +S+   +P++LK+    A+K    
Subjt:  WIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW--PMPVNLKRLIQNAQKTFKI

Query:  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
                     VEA+  + ER+                             ASK V  E  L           ++S+F  SL  PGE +G +AAQS+G
Subjt:  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG

Query:  EPATQMTLNTFHYAGVSAKNVTLGVPRLREII-NVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEV--------------------
        EP+TQMTLNTFH AG    NVTLG+PRL+EI+   A  IKTP ++  L     KTKE A  +   L   T+  + ++ E+                    
Subjt:  EPATQMTLNTFHYAGVSAKNVTLGVPRLREII-NVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEV--------------------

Query:  -WYDPD--PMST-IIEEDIDFVKSYYEMPDEEIAPEKISPWLLRI--------------ELNREMMVDKKLS---------------MANIAEKINLEFD
          Y P+  P  T I EED +       +   E A E     L RI              E + +  V  K +               + + A+K   +  
Subjt:  -WYDPD--PMST-IIEEDIDFVKSYYEMPDEEIAPEKISPWLLRI--------------ELNREMMVDKKLS---------------MANIAEKINLEFD

Query:  DDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINK-----------------VFIKCGKVNKFD--------
        D++    N ++       I  + D     E  D     +   +  E +M  +  ++G+ ++ +                 +F+K G+  KF+        
Subjt:  DDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINK-----------------VFIKCGKVNKFD--------

Query:  -------------------ENEG----------FKPEMEW--------------------MLDTEGVNLLAVMCHED-VDARRTTSNHLIEVIEVLGIEA
                           +N G            P++ +                     L   GV+  A+   +D +D R   SN + +++ + G+EA
Subjt:  -------------------ENEG----------FKPEMEW--------------------MLDTEGVNLLAVMCHED-VDARRTTSNHLIEVIEVLGIEA

Query:  VRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG
         R +++ E+  V    G  V+ RHL ++ D MT+ G    ++R G     T P  R +FE     ++ AA Y E D L   +  I LG  A  GTG
Subjt:  VRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG

AT4G18670.1 Leucine-rich repeat (LRR) family protein

1.1e-06

42.54

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Query:  TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT---SPSYSPTSPS--YSPTSPSYSPT---SPSYSP
        T SPG SP SP  SPS P   P+ P  +  SPG SP SP   P+ P+ +P SPG  PTSP  +PT   SP  SPT+P+   SP S   +PT   SP  SP
Subjt:  TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT---SPSYSPTSPS--YSPTSPSYSPT---SPSYSP

Query:  TSPS--YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPGYSPTSPSYS
        T+PS   SP SPS SP+ P   P SP  +PTSP   P+  S +P+SP  SP +PS  PT  S    SP   P+ P   P+ P+  SP  P   P+ P   
Subjt:  TSPS--YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPGYSPTSPSYS

Query:  PTSPSYSPTSPSYNPQSAKYSPSQAYSPSSP--RLSPSSPYSPTSPNYSPTSPSYSPTSP-AYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPT
        PT  S  P++P+  P  +   PS  Y P  P    SP SP  P  P +SP SPS  P  P  YSP  P   P  P  T   P  SPS P  SP  G  P 
Subjt:  PTSPSYSPTSPSYNPQSAKYSPSQAYSPSSP--RLSPSSPYSPTSPNYSPTSPSYSPTSP-AYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPT

Query:  AP-GYSPSSTSQYTP
        +P  Y PS     +P
Subjt:  AP-GYSPSSTSQYTP

AT4G35800.1 RNA polymerase II large subunit

0.0e+00

82.44

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Query:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------
        MD RFP+SPAEV+KVR+VQFGILSPDEI                                                                        
Subjt:  MDLRFPYSPAEVAKVRMVQFGILSPDEI------------------------------------------------------------------------

Query:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEI-DVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQ
                        E+ KFKQA++IKNPKNRL+KILDACKNKTKC+GGD+I DVQ   +D+PVKKSRGGCGAQQPK++I+GMKM AEYK QRKKND+ 
Subjt:  ----------------EDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEI-DVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDDQ

Query:  EQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII
        +QLPEP ERKQTL A+RVL +LKRI+D DC+LLG NPK+ARPDWMIL+VLPIPPPPVRPSVMMD +SRSEDDLTHQLAMIIRHNENL+RQE+NG+PAHII
Subjt:  EQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII

Query:  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK
        SEF QLLQFHIATYFDNELPG PRATQ+SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK
Subjt:  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLK

Query:  ELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDE
        ELV+YGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELG                              I+IMPYSTFRLNLSVTSPYNADFDGDE
Subjt:  ELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELG------------------------------IKIMPYSTFRLNLSVTSPYNADFDGDE

Query:  MNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI
        MNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQI
Subjt:  MNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI

Query:  NLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
        NL R SAWHA++ETGFITPGDT VRIE+GELL GTLCKK LGTS GSL+HVIWEEVGPDAARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINE
Subjt:  NLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE

Query:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID
        TIS AK  VK+LI++ Q + L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF  
Subjt:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID

Query:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
        RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Subjt:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ

Query:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
        KLDSLKMKK EF+R F+YE +DENW P Y+  EH+EDLK IRE R+VF+AE  KLE DR+QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SD
Subjt:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD

Query:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
        MHP+EIV+A+DKLQERL VVPG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
Subjt:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT

Query:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE
        LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED +FV+SYYEMPDE+
Subjt:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE

Query:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
        ++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRIMNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDI
Subjt:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI

Query:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG
        NKVFIK  + ++FDE  GFK   EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDGSYVNYRHLAILCDTMTYRG
Subjt:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG

Query:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT
        HLMAITRHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLPSY+DGL+FGMTP+RSP+SGT
Subjt:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT

Query:  PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
        PYHEGMMSPNYLLSPN+RLSP+SDAQFSPYVGGMAFSP+       SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY
Subjt:  PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY

Query:  SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
        SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA       YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
Subjt:  SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP

Query:  TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPY
        TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSP+YSPSSPTYSPSSPY
Subjt:  TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPY

Query:  NTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDD
        ++G SPD       YSPSAGYSPT PGYSPSST QYTP   DK D++ K D
Subjt:  NTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDD

AT5G60040.1 nuclear RNA polymerase C1

6.8e-169

32.94

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Query:  LSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERNGSPAHIISEFAQLLQFH
        L    VLG+ KR++D+DC+LL +     RP+ +I+  + +PP  +RPSVM+     +E+DLT +L  II  N +L +   +   SP ++  +    +Q  
Subjt:  LSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERNGSPAHIISEFAQLLQFH

Query:  IATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP
        +A Y ++E+ G     Q    P+  I  RLK K GR R NL GKRV+F+ RTVI+PDP + I E+G+P  +A  LT+PE V+ +NIE+L++ V  GP+  
Subjt:  IATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP

Query:  PGKTGAKY-------IIRDDGQRL-DLRYLKKSSDHHLELG--------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETR
        PG    +Y       ++ D  +R+ D   +    D HL+ G                     +IMP+ T R N SV +PYNADFDGDEMNMHVPQ+ E R
Subjt:  PGKTGAKY-------IIRDDGQRL-DLRYLKKSSDHHLELG--------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETR

Query:  AEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGKQVFNLI------IPKQINLTR
         E + LM V   + +P++   ++   QD L     IT++DTF  +  F  I  +  D    I  P P ILKP  LWTGKQ+F+++      I   + L  
Subjt:  AEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGKQVFNLI------IPKQINLTR

Query:  TSAWHAESETGF---ITPGDTFVRIEKGELLTGTLCKKALGT-STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE
              + E GF   +   D +V     EL++G L K  LG  +   L  ++  +    AA   +     L   W+  + FSIGI D        ++  +
Subjt:  TSAWHAESETGF---ITPGDTFVRIEKGELLTGTLCKKALGT-STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINE

Query:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID
        +I    ++    I++    +L+ + G     S E ++  +LN  R+  G +    L   N+   M   GSKGS INISQM ACVGQQ V G R P GFID
Subjt:  TISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFID

Query:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
        R+LPHF +    P ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT+ TGY+ RRL+KA+ED++V YD TVRN+ G ++QF YG+DGMD   +E +
Subjt:  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ

Query:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD
            L      F R+F    + +   P    P       +  E    FE E+  +  D+ ++ T+                                   
Subjt:  KLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASD

Query:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT
              V+++ +    L V     P              +L +++  + + L+ +          +     R+ +  +  G  IG + AQSIGEP TQMT
Subjt:  MHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMT

Query:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE
        L TFH+AGV++ N+T GVPR+ EIIN +K I TP +S  L+     T   A+ V+  +E TTL  V ++ EV       S  I  D   +         E
Subjt:  LNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE

Query:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI
         A   I+PW ++  + +   +           K+N   D+D                IR+++       + D+S     F      N+L  + + GI  +
Subjt:  IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDI

Query:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG
         +V +        D+++    + +W L  EG NLLAVM    ++ R TTSN+++EV + LGIEA R +++DE+  V+   G  ++ RH+ +L D MTYRG
Subjt:  NKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRG

Query:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG
         ++ I R GI + D   +M+ SFE T D L  AA   + D++ GVTE +++G    +GTG
Subjt:  HLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG

AT5G60040.2 nuclear RNA polymerase C1

3.6e-162

32.58

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Query:  LSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERNGSPAHIISEFAQLLQFH
        L    VLG+ KR++D+DC+LL +     RP+ +I+  + +PP  +RPSVM+     +E+DLT +L  II  N +L +   +   SP ++  +    +Q  
Subjt:  LSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERNGSPAHIISEFAQLLQFH

Query:  IATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP
        +A Y ++E+ G     Q    P+  I  RLK K GR R NL GKRV+F+ RTVI+PDP + I E+G+P  +A  LT+PE V+ +NIE+L++ V  GP+  
Subjt:  IATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP

Query:  PGKTGAKY-------IIRDDGQRL-DLRYLKKSSDHHLELG--------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETR
        PG    +Y       ++ D  +R+ D   +    D HL+ G                     +IMP+ T R N SV +PYNADFDGDEMNMHVPQ+ E R
Subjt:  PGKTGAKY-------IIRDDGQRL-DLRYLKKSSDHHLELG--------------------IKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETR

Query:  AEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGKQVFNLI------IPKQINLTR
         E + LM V   + +P++   ++   QD L     IT++DTF  +  F  I  +  D    I  P P ILKP  LWTGKQ+F+++      I   + L  
Subjt:  AEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGKQVFNLI------IPKQINLTR

Query:  TSAWHAESETGF---ITPGDTFVRIEKGELLTGTLCKKALGT--------STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAA
              + E GF   +   D +V     EL++G L K  L          +   L  ++  +    AA   +     L   W+  + FSIGI D      
Subjt:  TSAWHAESETGF---ITPGDTFVRIEKGELLTGTLCKKALGT--------STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAA

Query:  TMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
          ++  ++I    ++    I++    +L+ + G     S E ++  +LN  R+  G +    L   N+   M   GSKGS INISQM ACVGQQ V G R
Subjt:  TMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR

Query:  IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD
         P GFIDR+LPHF +    P ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT+ TGY+ RRL+KA+ED++V YD TVRN+ G ++QF YG+DGMD
Subjt:  IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD

Query:  AVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKI
           +E +    L      F R+F    + +   P    P       +  E    FE E+  +  D+ ++ T+                            
Subjt:  AVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKI

Query:  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
                     V+++ +    L V     P              +L +++  + + L+ +          +     R+ +  +  G  IG + AQSIG
Subjt:  DFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG

Query:  EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSY
        EP TQMTL TFH+AGV++ N+T GVPR+ EIIN +K I TP +S  L+     T   A+ V+  +E TTL  V ++ EV       S  I  D   +   
Subjt:  EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSY

Query:  YEMPDEEIAPEKISPWLL--------RIELNRE--MMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKK
              E A   I+PW +        RI+LN     ++D  L +  + +K            FN  N + ++  I I+N                  +K 
Subjt:  YEMPDEEIAPEKISPWLL--------RIELNRE--MMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKK

Query:  IESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY
        +E  ++ E       D++K+  K              P   W       NLLAVM    ++ R TTSN+++EV + LGIEA R +++DE+  V+   G  
Subjt:  IESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSY

Query:  VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG
        ++ RH+ +L D MTYRG ++ I R GI + D   +M+ SFE T D L  AA   + D++ GVTE +++G    +GTG
Subjt:  VNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG

Sequences

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CDS sequence

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ATGGATTTGCGATTCCCTTACTCCCCGGCAGAGGTTGCCAAAGTTCGAATGGTTCAGTTTGGCATTCTTAGCCCCGACGAGATTGAGGACGCCAAGTTTAAACAAGCATT
GCGGATTAAGAATCCCAAGAACAGGCTTAGAAAGATTTTGGATGCCTGCAAGAACAAAACCAAGTGTGAAGGTGGAGATGAAATTGATGTTCAAGGTCAAGAATCAGATC
AACCGGTCAAAAAGAGTCGGGGTGGCTGTGGTGCTCAGCAGCCTAAGATCTCAATTGATGGTATGAAAATGACTGCGGAGTACAAGGCTCAAAGGAAAAAAAATGATGAT
CAGGAGCAGCTGCCTGAACCCGTGGAAAGAAAACAGACACTTAGTGCTGAAAGGGTACTTGGCATTCTGAAAAGAATTACTGATGAGGATTGCAAACTTTTGGGCCTGAA
TCCAAAGTATGCTCGGCCTGACTGGATGATTCTGCAAGTCCTTCCTATTCCACCACCTCCTGTGAGACCATCGGTTATGATGGACACCTCATCTAGAAGTGAGGACGATC
TAACTCATCAGTTGGCTATGATTATCAGGCACAACGAAAACCTCAGGAGACAAGAGAGAAATGGTTCTCCTGCACATATCATTTCAGAGTTTGCACAACTATTGCAGTTT
CATATAGCCACATATTTTGATAATGAATTACCTGGACTACCCAGGGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTTGTAGTAGGCTCAAGGCAAAGGAAGGCCG
GATAAGAGGAAACTTGATGGGAAAACGTGTAGATTTTTCAGCACGAACCGTTATAACACCTGATCCAACAATTAATATTGATGAACTGGGAGTACCCTGGAGTATTGCTT
TGAACCTTACGTATCCGGAGACCGTGACACCATATAATATAGAGAGGTTAAAGGAACTTGTTGAATATGGTCCCCATCCTCCACCTGGTAAAACTGGTGCCAAGTACATC
ATACGAGATGATGGGCAGCGGCTTGATCTTCGCTATCTTAAAAAAAGTAGTGATCATCATTTGGAGCTTGGAATCAAGATTATGCCCTACTCAACTTTCCGTCTAAATTT
ATCTGTCACGTCACCTTACAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTTCCTCAGTCATTTGAGACAAGGGCAGAAGTATTGGAACTCATGATGGTTCCCA
AATGCATTGTGTCGCCTCAGTCAAACCGTCCTGTAATGGGTATAGTGCAAGATACTCTGTTAGGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGATGTT
TTCATGAATATCTTGATGTGGTGGGAAGATTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACGGGAAAGCAAGTTTTTAATCTTATTAT
ACCAAAGCAGATTAATCTCACGAGAACTTCTGCCTGGCATGCTGAGTCTGAAACTGGATTCATAACTCCTGGGGATACTTTTGTGAGGATTGAGAAGGGGGAGCTACTTA
CTGGAACTCTTTGCAAGAAGGCACTCGGAACATCAACTGGAAGTCTTATACATGTTATCTGGGAGGAGGTTGGTCCGGATGCAGCCCGAAAATTTCTGGGTCATACTCAA
TGGCTCGTCAATTACTGGCTTTTACAGAATGCTTTTAGCATTGGGATCGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACGATCTCTGCAGCTAA
AAATGAAGTGAAAAACCTCATCAAGAAAGCGCAAGAACGGAGTTTAGAGCCTGAACCTGGACGCACAATGATGGATTCATTTGAAAACAAAGTGAATCAGGTCCTGAATA
AGGCTCGTGATGATGCTGGTAGTAGTGCGCAAAAAAGTTTGTCAGAGAGTAACAATCTGAAAGCTATGGTTACGGCAGGATCCAAGGGCAGTTTTATCAATATCTCCCAG
ATGACTGCTTGCGTGGGGCAGCAGAATGTTGAAGGGAAGCGAATACCATTTGGTTTCATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCG
TGGCTTTGTTGAGAACTCATATCTTCGAGGATTGACTCCGCAGGAGTTCTTTTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACCTCTGAAA
CAGGTTACATTCAGCGGAGGCTGGTGAAGGCCATGGAGGATATCATGGTTAAATATGACGGGACTGTTAGAAACTCATTGGGTGATGTTATTCAGTTTCTTTATGGTGAA
GATGGTATGGACGCTGTCTGGATAGAATCTCAGAAACTAGATTCTTTGAAAATGAAGAAAAAGGAATTTGAGAGGATCTTCAGGTATGAGTTTGAAGATGAAAACTGGAA
GCCAAATTACATGTTGCCAGAGCATGTAGAAGATTTGAAAACCATCAGAGAATTCCGGAATGTGTTTGAGGCTGAAGTTCAAAAGCTTGAAGCGGACAGGTATCAATTGG
GAACAGAAATTGCAACTACAGGTGAAAACTCTTGGCCAATGCCAGTTAACCTCAAGAGGCTTATTCAGAATGCACAAAAGACTTTCAAGATTGACTTTCGAAGGGCTTCT
GATATGCATCCTATGGAAATTGTTGAAGCTATTGACAAACTTCAAGAGAGGCTGAAGGTTGTTCCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAGAAGAACGCCACCCT
TTTCTTCAATATATTACTCCGAAGCACTTTTGCTAGCAAAAGGGTTTTGGATGAATACAGGCTTACTCGTGAAGCATTTGAGTGGGTTATTGGAGAAATAGAATCACGCT
TCCTTCAGTCACTAGTTGCACCTGGTGAAATGATTGGCTGTGTTGCTGCACAGTCCATTGGAGAGCCGGCAACTCAGATGACTCTTAATACCTTCCATTATGCTGGTGTC
AGTGCCAAGAATGTCACTCTTGGTGTTCCCAGGTTGAGGGAAATCATTAATGTAGCCAAGAGAATCAAAACACCTTCGCTTTCAGTCTATCTAAAACCTGAAGCTAATAA
AACTAAGGAGAGAGCGAAAACTGTTCAATGTGCTCTGGAATATACTACTCTTAGAAGCGTTACACAAGCTACGGAAGTATGGTATGATCCTGACCCCATGAGCACAATTA
TTGAAGAGGATATTGATTTTGTAAAATCCTACTATGAGATGCCAGATGAAGAAATTGCTCCTGAGAAAATCTCCCCCTGGTTGCTTCGAATAGAGTTGAATCGTGAAATG
ATGGTGGATAAGAAACTAAGCATGGCGAATATTGCCGAGAAGATCAACCTTGAATTTGATGATGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACT
TCGTATCCGTATCATGAATGATGAAGCCCCAAAGGGGGAATTGACTGATGAATCAGCTGAAGATGATGTGTTCTTGAAGAAAATTGAGAGCAATATGCTAACTGAAATGG
CTCTTCGTGGAATACCAGACATAAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTTGATGAGAATGAAGGTTTTAAGCCAGAGATGGAGTGGATGTTGGATACA
GAAGGTGTCAATCTTTTAGCCGTTATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAACCATTTGATTGAAGTTATTGAAGTTCTTGGGATTGAAGCAGTTCG
ACGTTCTCTCCTAGATGAATTGCGTGTTGTTATATCCTTTGATGGATCTTATGTTAATTACCGACATCTTGCCATCCTTTGTGACACCATGACTTATCGTGGCCACTTGA
TGGCTATTACTCGTCATGGTATTAATCGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATCTTACTTGATGCTGCAGTATATGCTGAAACT
GACCACTTGCGGGGTGTAACTGAAAATATAATGTTGGGTCAGCTGGCCCCCATAGGAACAGGAGGTTGTGCTCTGTATCTCAACGATGAGATGTTGAAGAATGCTATTGA
ACTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCTATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAATTATTTGT
TGAGCCCAAATCTCCGGCTTTCACCTATCAGCGATGCTCAATTTTCACCCTATGTAGGAGGAATGGCTTTCTCTCCTACTTCATCTCCAGGTTATAGCCCATCATCTCCA
GGCTACAGTCCATCATCTCCTGGCTATAGTCCCACATCTCCTGGGTATAGTCCTACTTCTCCGGGATACAGCCCTACCTCTCCGGGCTATAGTCCAACATCTCCGACTTA
CAGTCCTAGTTCGCCAGGTTATAGCCCAACTAGTCCTGCATATTCTCCTACGAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCCACCTCTCCAAGTTACAGCC
CCACCTCTCCTAGCTACAGCCCCACTTCCCCAAGCTATAGCCCCACTTCCCCAAGCTACAGCCCCACTTCGCCTGCTTACAGTCCCACTTCACCTGCTTACAGTCCCACT
TCTCCTGCATATAGCCCCACTTCGCCCTCCTACAGCCCAACTTCACCCTCCTACAGCCCAACATCACCTTCTTATAGTCCCACGTCTCCTTCCTACAGCCCAACATCTCC
ATCTTACAGTCCTACATCACCTTCGTACAGCCCTACCTCTCCAGCATATAGCCCCACCTCCCCTGGCTATAGTCCCACATCACCGAGCTATAGCCCCACTTCTCCTAGCT
ATAGTCCCACATCACCTAGTTATAATCCTCAATCAGCTAAATACAGCCCATCACAGGCATACTCACCCAGTAGTCCACGGTTGTCTCCTTCAAGTCCGTATAGCCCGACC
TCGCCAAACTACAGCCCAACGTCACCATCATATTCACCTACTTCTCCAGCATATTCTCCATCAAGCCCGACCTACAGTCCGAGCAGTCCATATAATACAGGACCCAGCCC
AGACTACAGCCCCAGTTCTCCACAATACAGTCCAAGTGCAGGGTACTCACCTACTGCTCCTGGGTATTCTCCATCATCTACTAGTCAGTACACACCACAAACAAGTGACA
AGGATGATAGGAGTAGAAAGGACGATAGGAACAATCGATGA

mRNA sequence

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Protein sequence

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MDLRFPYSPAEVAKVRMVQFGILSPDEIEDAKFKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPVKKSRGGCGAQQPKISIDGMKMTAEYKAQRKKNDD
QEQLPEPVERKQTLSAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQF
HIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI
IRDDGQRLDLRYLKKSSDHHLELGIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDV
FMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHAESETGFITPGDTFVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQ
WLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ
MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGE
DGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRAS
DMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGV
SAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREM
MVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDT
EGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET
DHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSP
GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT
SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPT
SPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR

HG10002898 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome