; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002909 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002909
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein
Genome locationChr11:15325924..15327888
RNA-Seq ExpressionHG10002909
SyntenyHG10002909
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146154.1 F-box protein At4g35930 [Cucumis sativus]9.2e-14496.99Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTP+TPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVNKGDGKG SLPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

XP_008448525.1 PREDICTED: F-box protein At4g35930 [Cucumis melo]7.8e-14396.62Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTP+TPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVNKGDGKG SLPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

XP_022145262.1 F-box protein At4g35930 [Momordica charantia]9.8e-13893.21Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTPRTPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VE CESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFV+KGDGKGL +PSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKL
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYE+ELCQAVAQNKL
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKL

XP_022943859.1 F-box protein At4g35930 [Cucurbita moschata]4.3e-13390.64Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTP
        MG+ F+N+RE KKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRKRVAVLDAGKTKR N  LEDKVSDRSPLMLSPVKLVMHINHI TPRTP
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTP

Query:  RVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPR
        RVE CESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV+KGDGKG SLPSPHTPKAPR
Subjt:  RVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPR

Query:  HGPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        HGPRPPSRLKVSEMRQVAAVLFQE+ FP RC+VPSV+PKPLCKSLASNRVLFYE+ELCQAVAQNKLR
Subjt:  HGPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

XP_038903596.1 F-box protein At4g35930 [Benincasa hispida]6.0e-14396.99Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFT+DREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHI+HI TPRTPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKG+GKGL LPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSVL KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

TrEMBL top hitse value%identityAlignment
A0A0A0L111 F-box domain-containing protein4.5e-14496.99Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTP+TPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVNKGDGKG SLPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

A0A1S3BKS0 F-box protein At4g359303.8e-14396.62Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTP+TPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVNKGDGKG SLPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

A0A5A7UEK6 F-box protein3.8e-14396.62Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTP+TPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VEDCESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVNKGDGKG SLPSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYEDELCQAVAQNKLR
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

A0A6J1CW37 F-box protein At4g359304.8e-13893.21Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR
        MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTPRTPR
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPR

Query:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH
        VE CESESRLESLPMDLLVK+LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFV+KGDGKGL +PSPHTPKAPRH
Subjt:  VEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRH

Query:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKL
        GPRPPSRLKVSEMRQVAAVLFQESAFPPRC+VPSV+ KPLCKSLASNRVLFYE+ELCQAVAQNKL
Subjt:  GPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKL

A0A6J1FVG9 F-box protein At4g359302.1e-13390.64Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTP
        MG+ F+N+RE KKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRKRVAVLDAGKTKR N  LEDKVSDRSPLMLSPVKLVMHINHI TPRTP
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTP

Query:  RVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPR
        RVE CESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV+KGDGKG SLPSPHTPKAPR
Subjt:  RVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPR

Query:  HGPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR
        HGPRPPSRLKVSEMRQVAAVLFQE+ FP RC+VPSV+PKPLCKSLASNRVLFYE+ELCQAVAQNKLR
Subjt:  HGPRPPSRLKVSEMRQVAAVLFQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

SwissProt top hitse value%identityAlignment
O65416 F-box protein SKIP275.3e-0933.08Show/hide
Query:  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD
        G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +    I  + +           +SRLE LP DLL++V+C + H+
Subjt:  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD

Query:  QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR
         L+++  VS+ IR+A L+A+  HF YTTP ++R
Subjt:  QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR

Q5XF11 F-box protein At4g359309.1e-7852.65Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA------GK--------------------------------
        MGKV   D + K   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V D       GK                                
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA------GK--------------------------------

Query:  ---TKRNVVLEDKVSD-----------RSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLAR
            KR+ ++     D           +SPLMLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHDQL+AVFHVSQRIR A +LAR
Subjt:  ---TKRNVVLEDKVSD-----------RSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLAR

Query:  QFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCIVPSVLPKP-LCKSLAS
        Q+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RCIVPSVL +P L K +A 
Subjt:  QFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCIVPSVLPKP-LCKSLAS

Query:  N--RVLFYEDELCQAVAQNKL
           RVLFYEDELCQAVAQN L
Subjt:  N--RVLFYEDELCQAVAQNKL

Q8GX77 F-box protein At1g613404.0e-0947.37Show/hide
Query:  ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS
        E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Subjt:  ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS

Q9S9T6 F-box protein At4g050101.7e-0745.31Show/hide
Query:  RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDR
        + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+TP +
Subjt:  RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDR

Arabidopsis top hitse value%identityAlignment
AT1G61340.1 F-box family protein2.9e-1047.37Show/hide
Query:  ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS
        E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Subjt:  ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS

AT1G61340.2 F-box family protein4.3e-0640.91Show/hide
Query:  LLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS
        ++V+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Subjt:  LLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS

AT4G05010.1 F-box family protein1.2e-0845.31Show/hide
Query:  RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDR
        + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+TP +
Subjt:  RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDR

AT4G21510.1 F-box family protein3.7e-1033.08Show/hide
Query:  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD
        G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +    I  + +           +SRLE LP DLL++V+C + H+
Subjt:  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD

Query:  QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR
         L+++  VS+ IR+A L+A+  HF YTTP ++R
Subjt:  QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR

AT4G35930.1 F-box family protein6.5e-7952.65Show/hide
Query:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA------GK--------------------------------
        MGKV   D + K   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V D       GK                                
Subjt:  MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA------GK--------------------------------

Query:  ---TKRNVVLEDKVSD-----------RSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLAR
            KR+ ++     D           +SPLMLSP+ +VM    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHDQL+AVFHVSQRIR A +LAR
Subjt:  ---TKRNVVLEDKVSD-----------RSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLAR

Query:  QFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCIVPSVLPKP-LCKSLAS
        Q+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RCIVPSVL +P L K +A 
Subjt:  QFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCIVPSVLPKP-LCKSLAS

Query:  N--RVLFYEDELCQAVAQNKL
           RVLFYEDELCQAVAQN L
Subjt:  N--RVLFYEDELCQAVAQNKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGTGTTTACGAATGATAGGGAGCCGAAGAAATTGAAGCGGAGAAGGCGGTCGAAGGGCTCTGGTGGGAAATATTTGAAGCCGGGTGCTTTGGCGCAGCTGCG
GTGCAGCAAGGGCTCGGTTGCTAAATCCTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGTGGTGCTTGAAGATAAGGTTT
CTGATAGAAGTCCGTTGATGTTGTCACCTGTGAAATTGGTGATGCATATAAACCATATTGGTACCCCAAGAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTG
GAATCTCTACCTATGGATCTATTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAGGGCTGTTTTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGCTGGC
AAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCTACTGAACACTGGCCCTTTGTTAATAAGGGAGATG
GCAAAGGGTTGTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGCCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTC
TTTCAAGAATCAGCTTTTCCTCCAAGATGCATCGTTCCATCTGTTCTACCGAAACCTCTCTGCAAATCCTTGGCCTCGAACCGGGTTCTGTTTTACGAGGATGAGTTGTG
CCAAGCTGTTGCTCAAAATAAACTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGTGTTTACGAATGATAGGGAGCCGAAGAAATTGAAGCGGAGAAGGCGGTCGAAGGGCTCTGGTGGGAAATATTTGAAGCCGGGTGCTTTGGCGCAGCTGCG
GTGCAGCAAGGGCTCGGTTGCTAAATCCTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGTGGTGCTTGAAGATAAGGTTT
CTGATAGAAGTCCGTTGATGTTGTCACCTGTGAAATTGGTGATGCATATAAACCATATTGGTACCCCAAGAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTG
GAATCTCTACCTATGGATCTATTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAGGGCTGTTTTCCATGTCTCTCAACGGATCAGAAAGGCTGTTTTGCTGGC
AAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGAACAACCACCCCTCGACCTACTGAACACTGGCCCTTTGTTAATAAGGGAGATG
GCAAAGGGTTGTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGCCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTC
TTTCAAGAATCAGCTTTTCCTCCAAGATGCATCGTTCCATCTGTTCTACCGAAACCTCTCTGCAAATCCTTGGCCTCGAACCGGGTTCTGTTTTACGAGGATGAGTTGTG
CCAAGCTGTTGCTCAAAATAAACTTCGTTGA
Protein sequenceShow/hide protein sequence
MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPRTPRVEDCESESRL
ESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVL
FQESAFPPRCIVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR