; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002947 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002947
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr11:15711422..15712027
RNA-Seq ExpressionHG10002947
SyntenyHG10002947
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG63523.1 hypothetical protein EZV62_010517 [Acer yangbiense]2.2e-2534.9Show/hide
Query:  METDHLVDDWKKLRLSEEERET-KIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M T  L    + L + +E+ E  +I   L+ D +    ++HYLVGK+L SR +   A ++     W    +  +  +G+N+++  F +  DR+ I+  G 
Subjt:  METDHLVDDWKKLRLSEEERET-KIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD S +VLE PE    +SQLSF +  FW+++ DIP+   N+ MA+ L + IGE +D+  +  + CWG+ L+++VL+DIS+PL+R + ++L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.3e-2935.42Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRL-SFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M   +L+++WK  +L+ EE +  + +D          L+  L+ KLL  R I+   ++N    AW+    +FSV  +G N++L  F    DR  I ++G 
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRL-SFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD + ++++ P +  K   + F  V+ W+   D+ L+  NKTMA RLG+ IG F DV+ + +NFCWG  LR++V  D+ KPL RGI + L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-4043.46Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSW
        M+ ++L+ DW+K +L+ EE E  + +D+    +    L + LVGKLL  RII+   +      AW+     +V ++GKNL+L  F    D   + K G W
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSW

Query:  LFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
         FD + +VL+ P ++  +S+L F++VAFW+ L D+P+S+ NKTMA RLG+ IG F+DVDC++  F WG SLRI+VL+DI+KPLRRGI I +
Subjt:  LFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.5e-3440.62Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWR-TRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M T  L+++WK  +L+ EE ET I +D    +     L+  LVGKL + R I    ++N    AW+    +F V +LG NL+L  F    DR  I+K G 
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWR-TRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD + +++  P A +  S+L F K+  W+R  D+PL    + MA RLG+ +G F + DCD  N  WG +LR++V+LDISKPLRRGI + L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

XP_038688762.1 uncharacterized protein LOC119987929 [Tripterygium wilfordii]1.0e-2532.78Show/hide
Query:  WKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSWLFDNSFLVL
        W KL++++EE++  I +D +    +       + GK++M R IA   +     N W+T       +LGKN++ I F+S  D+  + +   WLFD S LVL
Subjt:  WKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSWLFDNSFLVL

Query:  EVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILI
        +  E+ V +  L F    FW++L ++PL+  ++ + +++G  IG+ ++VD D +  CWG  LR+++ L + KPL RG +I
Subjt:  EVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILI

TrEMBL top hitse value%identityAlignment
A0A5C7I1Z5 Uncharacterized protein1.1e-2534.9Show/hide
Query:  METDHLVDDWKKLRLSEEERET-KIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M T  L    + L + +E+ E  +I   L+ D +    ++HYLVGK+L SR +   A ++     W    +  +  +G+N+++  F +  DR+ I+  G 
Subjt:  METDHLVDDWKKLRLSEEERET-KIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD S +VLE PE    +SQLSF +  FW+++ DIP+   N+ MA+ L + IGE +D+  +  + CWG+ L+++VL+DIS+PL+R + ++L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

A0A6J1BSZ1 uncharacterized protein LOC1110054811.6e-2935.42Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRL-SFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M   +L+++WK  +L+ EE +  + +D          L+  L+ KLL  R I+   ++N    AW+    +FSV  +G N++L  F    DR  I ++G 
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRL-SFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD + ++++ P +  K   + F  V+ W+   D+ L+  NKTMA RLG+ IG F DV+ + +NFCWG  LR++V  D+ KPL RGI + L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

A0A6J1DU55 uncharacterized protein LOC1110231355.3e-4143.46Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSW
        M+ ++L+ DW+K +L+ EE E  + +D+    +    L + LVGKLL  RII+   +      AW+     +V ++GKNL+L  F    D   + K G W
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSW

Query:  LFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
         FD + +VL+ P ++  +S+L F++VAFW+ L D+P+S+ NKTMA RLG+ IG F+DVDC++  F WG SLRI+VL+DI+KPLRRGI I +
Subjt:  LFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

A0A6J1DX30 uncharacterized protein LOC1110248742.2e-3440.62Show/hide
Query:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWR-TRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS
        M T  L+++WK  +L+ EE ET I +D    +     L+  LVGKL + R I    ++N    AW+    +F V +LG NL+L  F    DR  I+K G 
Subjt:  METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWR-TRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGS

Query:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL
        W FD + +++  P A +  S+L F K+  W+R  D+PL    + MA RLG+ +G F + DCD  N  WG +LR++V+LDISKPLRRGI + L
Subjt:  WLFDNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIEL

A0A803MW53 Uncharacterized protein9.8e-2732.98Show/hide
Query:  DHLVDDWKKLRLSEEERETKIQLDLQL-DSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSWLF
        + L+ DW++L+L++EE     Q D+ L + +++  +   LVGKLL  +     A++      WR   + ++  +  N+++ +F++  DR+ + +   W+F
Subjt:  DHLVDDWKKLRLSEEERETKIQLDLQL-DSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSWLF

Query:  DNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIELGD
        DN  L+L+   A  + S++SF    FW+RL+D+P   ++  +A  +G+ IGE +DVD + D  CW E +R+KV+++I+KPLRRG+ I + D
Subjt:  DNSFLVLEVPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIELGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGATCATCTTGTTGATGACTGGAAGAAGTTGAGATTATCAGAGGAGGAAAGGGAGACCAAGATTCAACTGGATCTACAGCTTGATTCTCTTAATCATGGTCA
TTTGGATCACTACTTGGTGGGAAAACTCCTGATGTCTAGAATCATTGCACCTGGTGCAATAAGGAATGCGTTTGCCAATGCCTGGAGGACAAGATTAAGTTTTAGTGTTG
GTAATCTTGGAAAGAATCTTTACCTGATTAAATTTTACTCAAGAAAAGACAGAGAATGGATCTTTAAATTGGGGTCGTGGTTATTTGATAATTCGTTTTTGGTGCTGGAG
GTTCCAGAGGCAAACGTCAAACTCTCACAATTATCATTCCATAAGGTGGCTTTCTGGATGCGTTTAATGGACATTCCCCTTAGCTTTCAAAACAAGACTATGGCAAAACG
GCTGGGAGATGTCATAGGAGAGTTTTTAGATGTTGACTGTGATCAGGATAACTTTTGCTGGGGTGAAAGTTTGAGAATCAAGGTTTTGTTAGACATTTCTAAACCCTTGA
GAAGAGGAATCTTGATTGAATTAGGGGACGATCATACGAGTACCGGATTGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAGATCATCTTGTTGATGACTGGAAGAAGTTGAGATTATCAGAGGAGGAAAGGGAGACCAAGATTCAACTGGATCTACAGCTTGATTCTCTTAATCATGGTCA
TTTGGATCACTACTTGGTGGGAAAACTCCTGATGTCTAGAATCATTGCACCTGGTGCAATAAGGAATGCGTTTGCCAATGCCTGGAGGACAAGATTAAGTTTTAGTGTTG
GTAATCTTGGAAAGAATCTTTACCTGATTAAATTTTACTCAAGAAAAGACAGAGAATGGATCTTTAAATTGGGGTCGTGGTTATTTGATAATTCGTTTTTGGTGCTGGAG
GTTCCAGAGGCAAACGTCAAACTCTCACAATTATCATTCCATAAGGTGGCTTTCTGGATGCGTTTAATGGACATTCCCCTTAGCTTTCAAAACAAGACTATGGCAAAACG
GCTGGGAGATGTCATAGGAGAGTTTTTAGATGTTGACTGTGATCAGGATAACTTTTGCTGGGGTGAAAGTTTGAGAATCAAGGTTTTGTTAGACATTTCTAAACCCTTGA
GAAGAGGAATCTTGATTGAATTAGGGGACGATCATACGAGTACCGGATTGATATAA
Protein sequenceShow/hide protein sequence
METDHLVDDWKKLRLSEEERETKIQLDLQLDSLNHGHLDHYLVGKLLMSRIIAPGAIRNAFANAWRTRLSFSVGNLGKNLYLIKFYSRKDREWIFKLGSWLFDNSFLVLE
VPEANVKLSQLSFHKVAFWMRLMDIPLSFQNKTMAKRLGDVIGEFLDVDCDQDNFCWGESLRIKVLLDISKPLRRGILIELGDDHTSTGLI