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HG10002948 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002948
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionELL-associated factor 1-like
Genome locationChr11:15716837..15717211
RNA-Seq ExpressionHG10002948
SyntenyHG10002948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]2.4e-2257.63Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPR-----FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF
        MAS LKK L KLTA++RLCL+ R R      F S DRKV  R   E Q RI +N   R LE AS+S Y  + +DVDQ+A++FI++FRRQLRLE QIS Q 
Subjt:  MASCLKKTLKKLTAILRLCLLRRPR-----FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF

Query:  MYYGVNSFETEYEDIWPP
         YY VNS+ETEYE I PP
Subjt:  MYYGVNSFETEYEDIWPP

KAE8650012.1 hypothetical protein Csa_009473 [Cucumis sativus]4.0e-1752.89Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY
        MA  L++TL KL A LRLCLL R R  +      RTR+  E       +++ RNLE  S+S Y S   F DDVD +A++FI++FRRQLRLE QIS Q   
Subjt:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY

Query:  YGV--NSFETEYEDIWPPPPP
        YGV  NSFET+YE+I PPPPP
Subjt:  YGV--NSFETEYEDIWPPPPP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1955.08Show/hide
Query:  LKKTLKKLTAILRLCLLRRP-----RFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQFMYYG
        LKK+  KLTA LRLC+ RR      R F S DR    RSF E   RI++NRS+R LE AS+++Y +F DDVD+++Q+FID F RQLRLE QIS Q  Y  
Subjt:  LKKTLKKLTAILRLCLLRRP-----RFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQFMYYG

Query:  VNSFETEYEDIWPPPPPI
        VNS ETE E+  PP P I
Subjt:  VNSFETEYEDIWPPPPPI

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]3.3e-1953.39Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPR------FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQ
        MAS L+K L KL A+LRLCLL R R      F    D+KV  R   E Q RI ++  +R LE AS+S Y  + +DVDQ+A++FI++FRRQLRLE QIS Q
Subjt:  MASCLKKTLKKLTAILRLCLLRRPR------FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQ

Query:  FMYYGVNSFETEYEDIWP
          YY VNS+ETEYE   P
Subjt:  FMYYGVNSFETEYEDIWP

XP_031739290.1 uncharacterized protein LOC116402928 [Cucumis sativus]4.0e-1752.89Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY
        MA  L++TL KL A LRLCLL R R  +      RTR+  E       +++ RNLE  S+S Y S   F DDVD +A++FI++FRRQLRLE QIS Q   
Subjt:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY

Query:  YGV--NSFETEYEDIWPPPPP
        YGV  NSFET+YE+I PPPPP
Subjt:  YGV--NSFETEYEDIWPPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein1.6e-1953.39Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPR------FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQ
        MAS L+K L KL A+LRLCLL R R      F    D+KV  R   E Q RI ++  +R LE AS+S Y  + +DVDQ+A++FI++FRRQLRLE QIS Q
Subjt:  MASCLKKTLKKLTAILRLCLLRRPR------FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQ

Query:  FMYYGVNSFETEYEDIWP
          YY VNS+ETEYE   P
Subjt:  FMYYGVNSFETEYEDIWP

A0A0A0L6A3 Uncharacterized protein1.9e-1752.89Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY
        MA  L++TL KL A LRLCLL R R  +      RTR+  E       +++ RNLE  S+S Y S   F DDVD +A++FI++FRRQLRLE QIS Q   
Subjt:  MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTS---FGDDVDQQAQVFIDSFRRQLRLENQISPQFMY

Query:  YGV--NSFETEYEDIWPPPPP
        YGV  NSFET+YE+I PPPPP
Subjt:  YGV--NSFETEYEDIWPPPPP

A0A5D3CHZ5 Uncharacterized protein1.2e-2257.63Show/hide
Query:  MASCLKKTLKKLTAILRLCLLRRPR-----FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF
        MAS LKK L KLTA++RLCL+ R R      F S DRKV  R   E Q RI +N   R LE AS+S Y  + +DVDQ+A++FI++FRRQLRLE QIS Q 
Subjt:  MASCLKKTLKKLTAILRLCLLRRPR-----FFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF

Query:  MYYGVNSFETEYEDIWPP
         YY VNS+ETEYE I PP
Subjt:  MYYGVNSFETEYEDIWPP

A0A6J1CVX6 ELL-associated factor 1-like5.9e-0640.6Show/hide
Query:  LKKTLKKLTAILRLCLLRRPRFFHSH--------DRKVRTRSFFEYQ-------------RRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRR
        LKK L+K T +LRL L RR     SH        DR VR R     Q                I    + +  P  T +Y    DDVD++AQ FID FR 
Subjt:  LKKTLKKLTAILRLCLLRRPRFFHSH--------DRKVRTRSFFEYQ-------------RRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRR

Query:  QLRLENQISPQF-MYYGVNSFETEYEDIWPPPP
        +L LE QIS Q   YY  +S ETEYED  PP P
Subjt:  QLRLENQISPQF-MYYGVNSFETEYEDIWPPPP

A0A6J1CW64 uncharacterized protein LOC1110147803.7e-1650.41Show/hide
Query:  LKKTLKKLTAILR----LCLLRRP-----RFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF
        LKK ++K+TA+LR    LCL RR      R F   DR V  RSF E    I +N S+R LE AS+  Y +  DDVD+++Q+FID+F R+LRLE QIS Q 
Subjt:  LKKTLKKLTAILR----LCLLRRP-----RFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQF

Query:  MYYGVNSFETEYEDIWPPPPP
         YY +NS  TE E+  PPPPP
Subjt:  MYYGVNSFETEYEDIWPPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTGCCTCAAGAAGACGTTGAAGAAACTCACTGCAATTCTACGCCTCTGTCTCCTTCGCCGCCCGCGATTCTTCCATTCCCACGACCGCAAGGTCAGGACACG
GAGTTTCTTCGAATATCAGAGGAGAATCATTCAGAATCGTTCCCTGAGAAACCTTGAACCTGCTTCGACTTCAACCTATACAAGCTTTGGAGACGATGTCGATCAGCAAG
CGCAGGTTTTCATCGATAGTTTTCGCCGTCAATTGAGGTTAGAAAATCAAATTTCTCCGCAATTCATGTATTATGGAGTTAATAGCTTTGAAACAGAGTATGAAGACATA
TGGCCTCCGCCACCGCCGATTTTTCGCCGTCCATTTGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTTGCCTCAAGAAGACGTTGAAGAAACTCACTGCAATTCTACGCCTCTGTCTCCTTCGCCGCCCGCGATTCTTCCATTCCCACGACCGCAAGGTCAGGACACG
GAGTTTCTTCGAATATCAGAGGAGAATCATTCAGAATCGTTCCCTGAGAAACCTTGAACCTGCTTCGACTTCAACCTATACAAGCTTTGGAGACGATGTCGATCAGCAAG
CGCAGGTTTTCATCGATAGTTTTCGCCGTCAATTGAGGTTAGAAAATCAAATTTCTCCGCAATTCATGTATTATGGAGTTAATAGCTTTGAAACAGAGTATGAAGACATA
TGGCCTCCGCCACCGCCGATTTTTCGCCGTCCATTTGATGAATGA
Protein sequenceShow/hide protein sequence
MASCLKKTLKKLTAILRLCLLRRPRFFHSHDRKVRTRSFFEYQRRIIQNRSLRNLEPASTSTYTSFGDDVDQQAQVFIDSFRRQLRLENQISPQFMYYGVNSFETEYEDI
WPPPPPIFRRPFDE