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HG10002949 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002949
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionELL-associated factor 1-like
Genome locationChr11:15726883..15727170
RNA-Seq ExpressionHG10002949
SyntenyHG10002949
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]9.3e-1457.53Show/hide
Query:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPP
        E Q RI +N   R LE AS+S Y  + +D+DQ+A++FI++FRRQLRLE+QIS Q  YY VNS+ETEYE   PP
Subjt:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPP

KAE8650012.1 hypothetical protein Csa_009473 [Cucumis sativus]6.6e-1257.53Show/hide
Query:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP
        +++ RNLE  S+S Y S   F DD+D +A++FI++FRRQLRLE+QIS Q   YGV  NSFET+YE+  PPPPP
Subjt:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1455.29Show/hide
Query:  TAAILPFFEHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPPPPPI
        TA +  F E + RI++NRS+R LE AS++SY +F DD+D+++Q+FID F RQLRLE+QIS Q  Y  VNS ETE E+  PP P I
Subjt:  TAAILPFFEHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPPPPPI

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]1.0e-1255.56Show/hide
Query:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWP
        E Q RI ++  +R LE AS+S Y  + +D+DQ+A++FI++FRRQLRLE+QIS Q  YY VNS+ETEYE   P
Subjt:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWP

XP_031739290.1 uncharacterized protein LOC116402928 [Cucumis sativus]6.6e-1257.53Show/hide
Query:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP
        +++ RNLE  S+S Y S   F DD+D +A++FI++FRRQLRLE+QIS Q   YGV  NSFET+YE+  PPPPP
Subjt:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein5.0e-1355.56Show/hide
Query:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWP
        E Q RI ++  +R LE AS+S Y  + +D+DQ+A++FI++FRRQLRLE+QIS Q  YY VNS+ETEYE   P
Subjt:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWP

A0A0A0L6A3 Uncharacterized protein3.2e-1257.53Show/hide
Query:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP
        +++ RNLE  S+S Y S   F DD+D +A++FI++FRRQLRLE+QIS Q   YGV  NSFET+YE+  PPPPP
Subjt:  NRSLRNLEPASTSSYRS---FGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGV--NSFETEYEDTWPPPPP

A0A5D3CHZ5 Uncharacterized protein4.5e-1457.53Show/hide
Query:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPP
        E Q RI +N   R LE AS+S Y  + +D+DQ+A++FI++FRRQLRLE+QIS Q  YY VNS+ETEYE   PP
Subjt:  EHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPP

A0A6J1CVX6 ELL-associated factor 1-like3.4e-0655Show/hide
Query:  PASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQF-MYYGVNSFETEYEDTWPPPP
        P  T SY    DD+D++AQ FID FR +L LE+QIS Q   YY  +S ETEYED  PP P
Subjt:  PASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQF-MYYGVNSFETEYEDTWPPPP

A0A6J1CW64 uncharacterized protein LOC1110147802.1e-1148.81Show/hide
Query:  TAAILPFFEHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPPPPP
        T  +  F E +  I +N S+R LE AS+  Y +  DD+D+++Q+FID+F R+LRLE+QIS Q  YY +NS  TE E+  PPPPP
Subjt:  TAAILPFFEHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCCACGGCCGCGATTCTTCCATTCTTCGAACATCAGAGGAGAATCATTCAGAATCGTTCCCTGAGAAACCTTGAACCTGCTTCGACTTCAAGCTATAGAAGCTT
TGGAGACGATATCGATCAGCAAGCGCAGGTTTTCATCGATAGTTTTCGCCGTCAATTGAGGTTAGAAAAACAAATTTCTCCGCAATTCATGTATTATGGAGTCAATAGCT
TTGAAACAGAGTATGAAGACACATGGCCTCCGCCACCGCCGATTTTTCGCCGTCCATTTGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCCCACGGCCGCGATTCTTCCATTCTTCGAACATCAGAGGAGAATCATTCAGAATCGTTCCCTGAGAAACCTTGAACCTGCTTCGACTTCAAGCTATAGAAGCTT
TGGAGACGATATCGATCAGCAAGCGCAGGTTTTCATCGATAGTTTTCGCCGTCAATTGAGGTTAGAAAAACAAATTTCTCCGCAATTCATGTATTATGGAGTCAATAGCT
TTGAAACAGAGTATGAAGACACATGGCCTCCGCCACCGCCGATTTTTCGCCGTCCATTTGATGAATGA
Protein sequenceShow/hide protein sequence
MFPTAAILPFFEHQRRIIQNRSLRNLEPASTSSYRSFGDDIDQQAQVFIDSFRRQLRLEKQISPQFMYYGVNSFETEYEDTWPPPPPIFRRPFDE