; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002950 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002950
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionELL-associated factor 1-like
Genome locationChr11:15733000..15733383
RNA-Seq ExpressionHG10002950
SyntenyHG10002950
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]3.6e-2969.49Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQL
        MA  LK+ L KLTA V  CLV RRRSQRL SF SDDRKV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ SLQL
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQL

Query:  RYYRVNSSETEYVERSPP
        RYYRVNS ETEY + SPP
Subjt:  RYYRVNSSETEYVERSPP

KAG6577759.1 hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2054.87Show/hide
Query:  LKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRV
        +K+ LTKLTAFV  C V R  S+R+RSF SD R   +R +L D+  +    V KLER  +S  G CE DVD+RA+IFID   RQL LERQ SL+L YY +
Subjt:  LKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRV

Query:  NSSETEYVERSPP
        NSSE +Y  RSPP
Subjt:  NSSETEYVERSPP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2459.66Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQR----RIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLR
        + F LK++  KLTAF+  C+ RR+ S+RLRSF SDDR   +R  L+D+R    R V KLERA+++SY   E DVDKR++IFID   RQLRLERQ SLQLR
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQR----RIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLR

Query:  YYRVNSSETEYVERSPPKP
        Y RVNSSETE  E+SPP P
Subjt:  YYRVNSSETEYVERSPPKP

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2055.75Show/hide
Query:  LKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRV
        +K+ LTKLTAFV  C V R  S+R+RSF SD R   +R +L D+  +    V KLER  +S  G CE DVD+RA+IFID   RQL LERQ SL+LRYY +
Subjt:  LKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRV

Query:  NSSETEYVERSPP
        NSSE +Y  RSPP
Subjt:  NSSETEYVERSPP

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]9.2e-2563.56Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ
        MA  L++ L KL A +  CL+ R+RS+RL SF S DD+KV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ SLQ
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ

Query:  LRYYRVNSSETEYVERSP
        LRYYRVNS ETEY +RSP
Subjt:  LRYYRVNSSETEYVERSP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein4.4e-2563.56Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ
        MA  L++ L KL A +  CL+ R+RS+RL SF S DD+KV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ SLQ
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ

Query:  LRYYRVNSSETEYVERSP
        LRYYRVNS ETEY +RSP
Subjt:  LRYYRVNSSETEYVERSP

A0A0A0L6A3 Uncharacterized protein1.6e-1450.39Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRS-QRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQ---DVDKRAEIFIDTVHRQLRLERQTSLQLR
        MA  L+ TL KL AF+  CL+ RRRS  R R+ + DD             +    LER ++S Y  CE+   DVD RAEIFI+   RQLRLERQ SLQLR
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRS-QRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQ---DVDKRAEIFIDTVHRQLRLERQTSLQLR

Query:  YYRV--NSSETEYVERSPPKPPPLPPI
         Y V  NS ET+Y E  PP PPP PPI
Subjt:  YYRV--NSSETEYVERSPPKPPPLPPI

A0A5D3CHZ5 Uncharacterized protein1.7e-2969.49Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQL
        MA  LK+ L KLTA V  CLV RRRSQRL SF SDDRKV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ SLQL
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQL

Query:  RYYRVNSSETEYVERSPP
        RYYRVNS ETEY + SPP
Subjt:  RYYRVNSSETEYVERSPP

A0A6J1CVX6 ELL-associated factor 1-like3.2e-0740.91Show/hide
Query:  FCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQ------------------RRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQ
        F LK+ L K T  +   L RR  S RLRS    DR V  R V   Q                     V+        SY   E DVD+RA+ FID    +
Subjt:  FCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQ------------------RRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQ

Query:  LRLERQTSLQLR-YYRVNSSETEYVERSPPKP
        L LERQ S QLR YYR +SSETEY + SPP P
Subjt:  LRLERQTSLQLR-YYRVNSSETEYVERSPPKP

A0A6J1CW64 uncharacterized protein LOC1110147803.3e-2054.17Show/hide
Query:  LKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLR
        LK+ + K+TA +      CL RRR S RLRSF   DR V +R  L+D    +   + +LERA++  YG  E DVDKR++IFID   R+LRLERQ SLQLR
Subjt:  LKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLR

Query:  YYRVNSSETEYVERSPPKPP
        YYR+NSS TE  ERSPP PP
Subjt:  YYRVNSSETEYVERSPPKPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein1.1e-0445.65Show/hide
Query:  EQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSETEYVERSP
        ++D+D +AE+FI   +RQL++ERQ SL+L+Y + N+    Y  RSP
Subjt:  EQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSETEYVERSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCTGTTTGAAGAGGACGCTGACGAAACTCACTGCATTTGTCCACCGCTGCCTCGTTCGCCGGCGACGTTCTCAACGGTTGAGATCATTCGTTTCTGACGATCG
GAAGGTAGAGATACGGATTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAGCTACGGAAGGTGTGAACAGGATGTAGACAAGCGAG
CGGAGATTTTCATCGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAACTTCTTTGCAATTGAGGTACTATAGAGTTAATAGCTCTGAAACAGAGTATGTAGAGAGA
TCGCCACCGAAGCCGCCGCCGCTGCCGCCGATTTTCCGTCGATTTAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTCTGTTTGAAGAGGACGCTGACGAAACTCACTGCATTTGTCCACCGCTGCCTCGTTCGCCGGCGACGTTCTCAACGGTTGAGATCATTCGTTTCTGACGATCG
GAAGGTAGAGATACGGATTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAGCTACGGAAGGTGTGAACAGGATGTAGACAAGCGAG
CGGAGATTTTCATCGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAACTTCTTTGCAATTGAGGTACTATAGAGTTAATAGCTCTGAAACAGAGTATGTAGAGAGA
TCGCCACCGAAGCCGCCGCCGCTGCCGCCGATTTTCCGTCGATTTAATGAATGA
Protein sequenceShow/hide protein sequence
MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSETEYVER
SPPKPPPLPPIFRRFNE