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HG10002957 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002957
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionELL-associated factor 1-like
Genome locationChr11:15797075..15797377
RNA-Seq ExpressionHG10002957
SyntenyHG10002957
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]1.3e-2168.82Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP
        S+RL SF SDDRKV I+ VL+DQ RI E     KLERA++S YG +EEDV+QRAEIFI+   RQLRLERQISLQLRYYRVNS E EYE+ S P
Subjt:  SRRLRSFVSDDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP

KAG6577759.1 hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1555.43Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDDQRRI----VEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP
        SRR+RSF SD R   ++ +L D+  +    V KLER  +S  G  E+DV+QRA+IFID   RQL LERQISL+L YY +NSSEI+YE RS P
Subjt:  SRRLRSFVSDDRKVDIQFVLDDQRRI----VEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1861.7Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDDQR----RIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRPRP
        SRRLRSF SDDR   ++  L+D+R    R V KLERA+++SY  +E+DV++R++IFID   RQLRLERQISLQLRY RVNSSE E EE+S P P
Subjt:  SRRLRSFVSDDRKVDIQFVLDDQR----RIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRPRP

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1556.52Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDDQRRI----VEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP
        SRR+RSF SD R   ++ +L D+  +    V KLER  +S  G  E+DV+QRA+IFID   RQL LERQISL+LRYY +NSSEI+YE RS P
Subjt:  SRRLRSFVSDDRKVDIQFVLDDQRRI----VEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]1.1e-2069.57Show/hide
Query:  SRRLRSFVS-DDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERS
        SRRL SF S DD+KV I+ VL+DQ RI E     KLERA++S YG +EEDV+QRAEIFI+   RQLRLERQISLQLRYYRVNS E EYE+RS
Subjt:  SRRLRSFVS-DDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERS

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein5.2e-2169.57Show/hide
Query:  SRRLRSFVS-DDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERS
        SRRL SF S DD+KV I+ VL+DQ RI E     KLERA++S YG +EEDV+QRAEIFI+   RQLRLERQISLQLRYYRVNS E EYE+RS
Subjt:  SRRLRSFVS-DDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERS

A0A0A0L6A3 Uncharacterized protein1.9e-0753.75Show/hide
Query:  VLDDQRRIVEKLERAANSSY---GRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRV--NSSEIEYEERSRPRPRPP
        VL+D  +    LER ++S Y     +E+DV+ RAEIFI+   RQLRLERQISLQLR Y V  NS E +YEE   P P PP
Subjt:  VLDDQRRIVEKLERAANSSY---GRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRV--NSSEIEYEERSRPRPRPP

A0A2C9UBN9 Uncharacterized protein1.1e-0549.41Show/hide
Query:  SRRLRSFVSDDR---KVDIQFVLDDQRRIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEY
        SRR R    +DR      I+ V  D+ + V  L+R    SY   E+D++QRAEIFI+   RQL LERQISLQLRYYR NS   +Y
Subjt:  SRRLRSFVSDDR---KVDIQFVLDDQRRIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEY

A0A5D3CHZ5 Uncharacterized protein6.2e-2268.82Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP
        S+RL SF SDDRKV I+ VL+DQ RI E     KLERA++S YG +EEDV+QRAEIFI+   RQLRLERQISLQLRYYRVNS E EYE+ S P
Subjt:  SRRLRSFVSDDRKVDIQFVLDDQRRIVE-----KLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRP

A0A6J1CW64 uncharacterized protein LOC1110147802.8e-1454.26Show/hide
Query:  SRRLRSFVSDDRKVDIQFVLDD----QRRIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRPRP
        S RLRSF   DR V ++  L+D    +   + +LERA++  YG  E+DV++R++IFID   R+LRLERQISLQLRYYR+NSS  E EERS P P
Subjt:  SRRLRSFVSDDRKVDIQFVLDD----QRRIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRPRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein6.8e-0546.34Show/hide
Query:  EEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEY
        +ED++ +AE+FI   +RQL++ERQISL+L+Y + N+    Y
Subjt:  EEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCGACGGTTGAGATCATTCGTTTCCGACGATCGGAAGGTAGATATACAGTTTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAG
CTACGGAAGGTGGGAAGAGGATGTAAATCAGCGAGCGGAGATTTTCATTGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAATTTCTTTGCAATTGAGGTACTATA
GAGTTAATAGCTCTGAAATTGAGTATGAAGAGAGATCGCGGCCGCGGCCGCGGCCGCCGATTTTCCGTCGATTTAATGAATGA
mRNA sequenceShow/hide mRNA sequence
TCTCGACGGTTGAGATCATTCGTTTCCGACGATCGGAAGGTAGATATACAGTTTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAG
CTACGGAAGGTGGGAAGAGGATGTAAATCAGCGAGCGGAGATTTTCATTGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAATTTCTTTGCAATTGAGGTACTATA
GAGTTAATAGCTCTGAAATTGAGTATGAAGAGAGATCGCGGCCGCGGCCGCGGCCGCCGATTTTCCGTCGATTTAATGAATGA
Protein sequenceShow/hide protein sequence
SRRLRSFVSDDRKVDIQFVLDDQRRIVEKLERAANSSYGRWEEDVNQRAEIFIDTVHRQLRLERQISLQLRYYRVNSSEIEYEERSRPRPRPPIFRRFNE