; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002971 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002971
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptioncobW domain-containing protein
Genome locationChr11:15926427..15927216
RNA-Seq ExpressionHG10002971
SyntenyHG10002971
Gene Ontology termsNA
InterPro domainsIPR003495 - CobW/HypB/UreG, nucleotide-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053000.1 COBW domain-containing protein 1-like [Cucumis melo var. makuwa]7.7e-4080.53Show/hide
Query:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MA +FL+RRTSP++LFQP L     S S+SPL+RNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE  G+ ALGSDTRVPATVITGFLG+GKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGK+IAVIENE
Subjt:  SQHGKRIAVIENE

TYK11456.1 COBW domain-containing protein 1-like [Cucumis melo var. makuwa]7.7e-4080.53Show/hide
Query:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MA +FL+RRTSP++LFQP L     S S+SPL+RNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE  G+ ALGSDTRVPATVITGFLG+GKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGK+IAVIENE
Subjt:  SQHGKRIAVIENE

XP_004146192.1 uncharacterized protein LOC101208167 [Cucumis sativus]5.5e-4687.61Show/hide
Query:  MATAFLVRRTSPKYLFQPRLHSF----SASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MAT FL+RRTSP+YLFQP LH F    S+SPLLRNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE SG+PALGSDTRVPATVITGFLGSGKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLHSF----SASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGKRIAVIENE
Subjt:  SQHGKRIAVIENE

XP_022145260.1 uncharacterized protein LOC111014757 [Momordica charantia]1.1e-3882.73Show/hide
Query:  MATAFLVRRTS-PKYLFQPRLHSFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQH
        MA AFLVRRTS P++LF+P LHS S+SPLL NL SLLFRDS SCN  NS PS++R FVSVP DSGAPALG+DTRVPATVITGFLGSGKTTLLNHILTSQH
Subjt:  MATAFLVRRTS-PKYLFQPRLHSFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQH

Query:  GKRIAVIENE
        GKRIAVIENE
Subjt:  GKRIAVIENE

XP_038877154.1 P-loop guanosine triphosphatase YjiA-like [Benincasa hispida]6.1e-4586.09Show/hide
Query:  MATAFLVRRTSPKYLFQPRLHSFSASP------LLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHI
        MATAFLVRRTS KYLFQPRLHS S+S       LLRNLCSLLFRDSTSC+RPNSFP Y+RSFVSVP+DSG+P LGSDTRVPATVITGFLGSGKTTLLNHI
Subjt:  MATAFLVRRTSPKYLFQPRLHSFSASP------LLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHI

Query:  LTSQHGKRIAVIENE
        LTSQHGKRIAVIENE
Subjt:  LTSQHGKRIAVIENE

TrEMBL top hitse value%identityAlignment
A0A0A0L6B7 cobW domain-containing protein2.7e-4687.61Show/hide
Query:  MATAFLVRRTSPKYLFQPRLHSF----SASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MAT FL+RRTSP+YLFQP LH F    S+SPLLRNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE SG+PALGSDTRVPATVITGFLGSGKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLHSF----SASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGKRIAVIENE
Subjt:  SQHGKRIAVIENE

A0A5A7UCR7 COBW domain-containing protein 1-like3.7e-4080.53Show/hide
Query:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MA +FL+RRTSP++LFQP L     S S+SPL+RNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE  G+ ALGSDTRVPATVITGFLG+GKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGK+IAVIENE
Subjt:  SQHGKRIAVIENE

A0A5D3CM14 COBW domain-containing protein 1-like3.7e-4080.53Show/hide
Query:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT
        MA +FL+RRTSP++LFQP L     S S+SPL+RNLCSLLFRDSTSCNRPNS PSYTRSFVS+PE  G+ ALGSDTRVPATVITGFLG+GKTTLLNHILT
Subjt:  MATAFLVRRTSPKYLFQPRLH----SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILT

Query:  SQHGKRIAVIENE
        SQHGK+IAVIENE
Subjt:  SQHGKRIAVIENE

A0A6J1CTY9 uncharacterized protein LOC1110147575.4e-3982.73Show/hide
Query:  MATAFLVRRTS-PKYLFQPRLHSFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQH
        MA AFLVRRTS P++LF+P LHS S+SPLL NL SLLFRDS SCN  NS PS++R FVSVP DSGAPALG+DTRVPATVITGFLGSGKTTLLNHILTSQH
Subjt:  MATAFLVRRTS-PKYLFQPRLHSFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQH

Query:  GKRIAVIENE
        GKRIAVIENE
Subjt:  GKRIAVIENE

A0A6J1L061 uncharacterized protein LOC1114986585.0e-3779.46Show/hide
Query:  MATAFLVRRTSPKYLFQPRLH---SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTS
        MATAFLVRRTS K+LFQPR H   S SASP L NLCS LFRDS   N   S PSY+RSFVS PE S A ALG+DTRVPATVITGFLGSGKTTLLNHILTS
Subjt:  MATAFLVRRTSPKYLFQPRLH---SFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTS

Query:  QHGKRIAVIENE
        QHGKRIAVIENE
Subjt:  QHGKRIAVIENE

SwissProt top hitse value%identityAlignment
Q4V339 COBW domain-containing protein 67.3e-0965.85Show/hide
Query:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        G   ++P T+ITG+LG+GKTTLLN+ILT QH KR+AVI NE
Subjt:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

Q5JTY5 COBW domain-containing protein 37.3e-0965.85Show/hide
Query:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        G   ++P T+ITG+LG+GKTTLLN+ILT QH KR+AVI NE
Subjt:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

Q5RIA9 COBW domain-containing protein 57.3e-0965.85Show/hide
Query:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        G   ++P T+ITG+LG+GKTTLLN+ILT QH KR+AVI NE
Subjt:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

Q8IUF1 COBW domain-containing protein 27.3e-0965.85Show/hide
Query:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        G   ++P T+ITG+LG+GKTTLLN+ILT QH KR+AVI NE
Subjt:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

Q9BRT8 COBW domain-containing protein 17.3e-0965.85Show/hide
Query:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        G   ++P T+ITG+LG+GKTTLLN+ILT QH KR+AVI NE
Subjt:  GSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

Arabidopsis top hitse value%identityAlignment
AT1G15730.1 Cobalamin biosynthesis CobW-like protein1.0e-1387.18Show/hide
Query:  DTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        D R+PAT+ITGFLGSGKTTLLNHILT  HGKRIAVIENE
Subjt:  DTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE

AT1G26520.1 Cobalamin biosynthesis CobW-like protein1.8e-0755.36Show/hide
Query:  SDT-RVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE------VYIAVFNDG
        SDT  V  +VITG+LG+GK+TL+N+IL  +HGKRIAVI NE      V  A+ N+G
Subjt:  SDT-RVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE------VYIAVFNDG

AT1G80480.1 plastid transcriptionally active 173.5e-1458.46Show/hide
Query:  RPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE
        R   F S + S     +      +  D R+PAT+ITGFLGSGKTTLLNHILT  HGKRIAVIENE
Subjt:  RPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCCTTTCTTGTTCGCAGAACTTCACCGAAATACCTCTTTCAACCTCGCCTCCATTCTTTTTCAGCTTCTCCGCTTCTCCGAAACCTTTGTTCTCTTCTTTT
TCGAGATTCCACTTCATGTAATCGTCCAAATTCTTTCCCTTCATACACCAGAAGTTTCGTCTCTGTTCCTGAAGATTCTGGTGCTCCTGCTCTCGGTTCTGATACTCGCG
TTCCCGCCACTGTGATCACTGGCTTTCTCGGTTCTGGAAAGACGACTCTCCTCAATCATATTCTTACATCTCAACATGGCAAGCGAATTGCTGTCATTGAAAATGAGGTA
TATATTGCAGTTTTCAACGATGGTATTATTTCCCTTGAGGGGTTCTGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGCCTTTCTTGTTCGCAGAACTTCACCGAAATACCTCTTTCAACCTCGCCTCCATTCTTTTTCAGCTTCTCCGCTTCTCCGAAACCTTTGTTCTCTTCTTTT
TCGAGATTCCACTTCATGTAATCGTCCAAATTCTTTCCCTTCATACACCAGAAGTTTCGTCTCTGTTCCTGAAGATTCTGGTGCTCCTGCTCTCGGTTCTGATACTCGCG
TTCCCGCCACTGTGATCACTGGCTTTCTCGGTTCTGGAAAGACGACTCTCCTCAATCATATTCTTACATCTCAACATGGCAAGCGAATTGCTGTCATTGAAAATGAGGTA
TATATTGCAGTTTTCAACGATGGTATTATTTCCCTTGAGGGGTTCTGGCCATAA
Protein sequenceShow/hide protein sequence
MATAFLVRRTSPKYLFQPRLHSFSASPLLRNLCSLLFRDSTSCNRPNSFPSYTRSFVSVPEDSGAPALGSDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEV
YIAVFNDGIISLEGFWP