; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003002 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003002
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHeat shock transcription factor
Genome locationChr11:16262643..16263662
RNA-Seq ExpressionHG10003002
SyntenyHG10003002
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0034605 - cellular response to heat (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR000232 - Heat shock factor (HSF)-type, DNA-binding
IPR027725 - Heat shock transcription factor family
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053027.1 heat shock factor protein HSF8-like [Cucumis melo var. makuwa]2.0e-4698.94Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANGGD+GLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

XP_004148748.1 heat stress transcription factor A-1d [Cucumis sativus]8.3e-4596.81Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANG D+GLASGSGNSHPTVPAPITNS+APPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

XP_008448660.1 PREDICTED: heat shock factor protein HSF8-like [Cucumis melo]2.0e-4698.94Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANGGD+GLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

XP_023005383.1 heat shock factor protein HSF8-like [Cucurbita maxima]7.7e-4392.55Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDG ANGG+AGL SGSG+SHPTVP PITN+NAPPPFLSKTYDMVDDPATDAVVSWS TNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

XP_038903116.1 heat shock factor protein HSF8-like [Benincasa hispida]8.8e-47100Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

TrEMBL top hitse value%identityAlignment
A0A0A0L179 HSF_DOMAIN domain-containing protein4.0e-4596.81Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANG D+GLASGSGNSHPTVPAPITNS+APPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

A0A1S3BL38 heat shock factor protein HSF8-like9.5e-4798.94Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANGGD+GLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

A0A5D3CJJ9 Heat shock factor protein HSF8-like9.5e-4798.94Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDGTANGGD+GLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

A0A6J1E6X4 heat shock factor protein HSF8-like1.1e-4293.62Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MD TANGGD+GLASGS +SHPTVPAPITN NAPPPFLSKTYDMVDDPATDAVVSWS TNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

A0A6J1L214 heat shock factor protein HSF8-like3.8e-4392.55Show/hide
Query:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        MDG ANGG+AGL SGSG+SHPTVP PITN+NAPPPFLSKTYDMVDDPATDAVVSWS TNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
Subjt:  MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

SwissProt top hitse value%identityAlignment
P41151 Heat stress transcription factor A-1a2.4e-3156.3Show/hide
Query:  MDGTANG----GDAGLASGSGNSHPTVPAPITNSNA-PPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYN
        MDG   G    G+A  A    N H   PA + N+N+ PPPFLSKTYDMV+DPATDA+VSWSPTNNSF+VW+PPEF+RDLLPKYFKHNNFSSFVRQLNTY 
Subjt:  MDGTANG----GDAGLASGSGNSHPTVPAPITNSNA-PPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYN

Query:  MGNTVVFGLFFSG----NGNKTSIRKDENKKCIKG
                  F+      G K  ++K   +K ++G
Subjt:  MGNTVVFGLFFSG----NGNKTSIRKDENKKCIKG

P41153 Heat shock factor protein HSF81.7e-3268.75Show/hide
Query:  TANGGDAGLASGSGNSHPTV-----PAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        ++  G A +  G G   P +     PAP+ ++NAPPPFL KTYDMVDDP+TD +VSWSPTNNSFVVW+PPEFA+DLLPKYFKHNNFSSFVRQLNTY
Subjt:  TANGGDAGLASGSGNSHPTV-----PAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

Q40152 Heat shock factor protein HSF86.4e-3272.83Show/hide
Query:  GDAGLASGSGNSHPTV-----PAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        G    A G G   P +     PAPI ++NAPPPFL KTYDMVDDP+TD +VSWSPTNNSFVVW+PPEFA+DLLPKYFKHNNFSSFVRQLNTY
Subjt:  GDAGLASGSGNSHPTV-----PAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

Q84T61 Heat stress transcription factor A-13.3e-2878.95Show/hide
Query:  PTVPAPITN--SNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        P   A ++N  + APPPFL KTY+MVDDPATDAVVSW P NNSFVVWN PEFARDLLPKYFKH+NFSSFVRQLNTY
Subjt:  PTVPAPITN--SNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

Q9LQM7 Heat stress transcription factor A-1d3.9e-2971.59Show/hide
Query:  ASGSGNSHPTVPAP------ITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        + G G+S  T P+P      I +SNAPPPFLSKTYDMVDD  TD++VSWS  NNSF+VW PPEFARDLLPK FKHNNFSSFVRQLNTY
Subjt:  ASGSGNSHPTVPAP------ITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

Arabidopsis top hitse value%identityAlignment
AT1G32330.1 heat shock transcription factor A1D2.8e-3071.59Show/hide
Query:  ASGSGNSHPTVPAP------ITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        + G G+S  T P+P      I +SNAPPPFLSKTYDMVDD  TD++VSWS  NNSF+VW PPEFARDLLPK FKHNNFSSFVRQLNTY
Subjt:  ASGSGNSHPTVPAP------ITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

AT3G02990.1 heat shock transcription factor A1E1.8e-2686.89Show/hide
Query:  PPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        PPFLSKTYDMVDDP TD VVSWS  NNSFVVWN PEFA+  LPKYFKHNNFSSFVRQLNTY
Subjt:  PPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

AT4G17750.1 heat shock factor 11.7e-3256.3Show/hide
Query:  MDGTANG----GDAGLASGSGNSHPTVPAPITNSNA-PPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYN
        MDG   G    G+A  A    N H   PA + N+N+ PPPFLSKTYDMV+DPATDA+VSWSPTNNSF+VW+PPEF+RDLLPKYFKHNNFSSFVRQLNTY 
Subjt:  MDGTANG----GDAGLASGSGNSHPTVPAPITNSNA-PPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYN

Query:  MGNTVVFGLFFSG----NGNKTSIRKDENKKCIKG
                  F+      G K  ++K   +K ++G
Subjt:  MGNTVVFGLFFSG----NGNKTSIRKDENKKCIKG

AT5G16820.1 heat shock factor 36.4e-2772.5Show/hide
Query:  SGNSH-PTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        S NS+ P++P P+   N+ PPFLSKTYDMVDDP T+ VVSWS  NNSFVVW+ PEF++ LLPKYFKHNNFSSFVRQLNTY
Subjt:  SGNSH-PTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY

AT5G16820.2 heat shock factor 36.4e-2772.5Show/hide
Query:  SGNSH-PTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY
        S NS+ P++P P+   N+ PPFLSKTYDMVDDP T+ VVSWS  NNSFVVW+ PEF++ LLPKYFKHNNFSSFVRQLNTY
Subjt:  SGNSH-PTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGGACTGCTAATGGCGGCGATGCTGGATTGGCCTCCGGGAGTGGTAACTCTCATCCGACGGTGCCGGCTCCTATCACTAATTCTAACGCGCCTCCACCGTTTCT
GAGTAAGACATATGATATGGTGGATGACCCGGCTACCGATGCGGTTGTGTCCTGGAGCCCTACGAATAATAGCTTTGTGGTTTGGAACCCGCCTGAGTTCGCTAGGGATC
TTTTGCCCAAATACTTCAAGCATAATAACTTCTCCAGCTTCGTCAGGCAGCTCAATACCTATAACATGGGAAATACAGTTGTCTTTGGTCTTTTCTTTTCTGGAAATGGA
AACAAGACTTCTATTAGGAAAGATGAAAACAAGAAATGCATCAAAGGGAAGGAAAAAGATCACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGGACTGCTAATGGCGGCGATGCTGGATTGGCCTCCGGGAGTGGTAACTCTCATCCGACGGTGCCGGCTCCTATCACTAATTCTAACGCGCCTCCACCGTTTCT
GAGTAAGACATATGATATGGTGGATGACCCGGCTACCGATGCGGTTGTGTCCTGGAGCCCTACGAATAATAGCTTTGTGGTTTGGAACCCGCCTGAGTTCGCTAGGGATC
TTTTGCCCAAATACTTCAAGCATAATAACTTCTCCAGCTTCGTCAGGCAGCTCAATACCTATAACATGGGAAATACAGTTGTCTTTGGTCTTTTCTTTTCTGGAAATGGA
AACAAGACTTCTATTAGGAAAGATGAAAACAAGAAATGCATCAAAGGGAAGGAAAAAGATCACAAATAG
Protein sequenceShow/hide protein sequence
MDGTANGGDAGLASGSGNSHPTVPAPITNSNAPPPFLSKTYDMVDDPATDAVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYNMGNTVVFGLFFSGNG
NKTSIRKDENKKCIKGKEKDHK