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HG10003021 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003021
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase 20 isoform B
Genome locationChr11:16422592..16422810
RNA-Seq ExpressionHG10003021
SyntenyHG10003021
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009073 - aromatic amino acid family biosynthetic process (biological process)
GO:0016579 - protein deubiquitination (biological process)
GO:0003856 - 3-dehydroquinate synthase activity (molecular function)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsIPR002812 - 3-dehydroquinate synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448679.1 PREDICTED: uncharacterized protein LOC103490778 isoform X1 [Cucumis melo]1.1e-2276.32Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MA  GNE M DDT TPTPT     SS+SEAA+RHVVVVMDGMEEFTT PL+WAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

XP_011652714.1 uncharacterized protein DDB_G0290685 isoform X1 [Cucumis sativus]4.4e-2472.62Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-------------SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MA  GNE M DDTPTPTPT             SS+SEAASRHVVVVMDGMEEFTT+PLKWAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-------------SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

XP_023007589.1 uncharacterized protein LOC111500162 [Cucurbita maxima]1.2e-2481.33Show/hide
Query:  MAEIGNEAMGDD---TPTPTPT-SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MAE G+EAMGDD   TPTPTP+ SSSSEAA+RH+VVVMDGMEEFTT+PL+WAL+N+I PGCVVTLIGAMPWLNIP
Subjt:  MAEIGNEAMGDD---TPTPTPT-SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

XP_038903689.1 uncharacterized protein LOC120090215 isoform X1 [Benincasa hispida]2.3e-2889.47Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MAE GNEAMGDDTPTPTPT     SSSSEAASRHVVVVMDGMEEFTTEPLKWAL+NVI PGCVVTLIGAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

XP_038903690.1 uncharacterized protein LOC120090215 isoform X2 [Benincasa hispida]2.3e-2889.47Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MAE GNEAMGDDTPTPTPT     SSSSEAASRHVVVVMDGMEEFTTEPLKWAL+NVI PGCVVTLIGAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

TrEMBL top hitse value%identityAlignment
A0A0A0L195 Uncharacterized protein2.1e-2472.62Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-------------SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MA  GNE M DDTPTPTPT             SS+SEAASRHVVVVMDGMEEFTT+PLKWAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-------------SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

A0A1S3BJN1 uncharacterized protein LOC103490778 isoform X15.2e-2376.32Show/hide
Query:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MA  GNE M DDT TPTPT     SS+SEAA+RHVVVVMDGMEEFTT PL+WAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  MAEIGNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

A0A1S3BKA1 uncharacterized protein LOC103490778 isoform X21.4e-2077.94Show/hide
Query:  MGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        M DDT TPTPT     SS+SEAA+RHVVVVMDGMEEFTT PL+WAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  MGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

A0A5D3CIU8 Ubiquitin carboxyl-terminal hydrolase3.4e-2277.78Show/hide
Query:  GNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        GNE M DDT TPTPT     SS+SEAA+RHVVVVMDGMEEFTT PL+WAL+NVI PGC+VTL+GAMPWLNIP
Subjt:  GNEAMGDDTPTPTPT-----SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

A0A6J1L5D0 uncharacterized protein LOC1115001625.6e-2581.33Show/hide
Query:  MAEIGNEAMGDD---TPTPTPT-SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP
        MAE G+EAMGDD   TPTPTP+ SSSSEAA+RH+VVVMDGMEEFTT+PL+WAL+N+I PGCVVTLIGAMPWLNIP
Subjt:  MAEIGNEAMGDD---TPTPTPT-SSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGATTGGAAATGAAGCCATGGGAGACGATACGCCAACCCCAACTCCGACGAGCTCATCATCGGAGGCTGCAAGTAGACATGTAGTGGTCGTCATGGATGGAAT
GGAAGAGTTCACGACGGAGCCACTCAAATGGGCGTTGGAGAATGTCATTATGCCTGGTTGCGTCGTTACTCTCATCGGTGCAATGCCATGGCTCAACATTCCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGATTGGAAATGAAGCCATGGGAGACGATACGCCAACCCCAACTCCGACGAGCTCATCATCGGAGGCTGCAAGTAGACATGTAGTGGTCGTCATGGATGGAAT
GGAAGAGTTCACGACGGAGCCACTCAAATGGGCGTTGGAGAATGTCATTATGCCTGGTTGCGTCGTTACTCTCATCGGTGCAATGCCATGGCTCAACATTCCTCGTTAG
Protein sequenceShow/hide protein sequence
MAEIGNEAMGDDTPTPTPTSSSSEAASRHVVVVMDGMEEFTTEPLKWALENVIMPGCVVTLIGAMPWLNIPR