; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003085 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003085
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:17238793..17239773
RNA-Seq ExpressionHG10003085
SyntenyHG10003085
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030163.1 hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-5164.71Show/hide
Query:  LKLKAKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINL
        +KLKAKVS+E+ VLV+VY+E+QEPR+AVNR QRDDVNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                
Subjt:  LKLKAKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINL

Query:  VCSSFSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
             SLVNL  KPKGARFT+CFGNLIQRS KALT+FQPK  R+ QN+SSGSTKN NDN +               RRIRLL FTCT
Subjt:  VCSSFSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

XP_008448775.1 PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo]1.1e-8088.52Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINLVC+S
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
        FSLVNLCGKPKG RFT+CFGNLIQRSYKAL +FQPKKDR+KQN+SSGSTKNVN+ VK+SESKSKN IDK+KGRRIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

XP_008448776.1 PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo]1.7e-7585.79Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINL    
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
          LVNLCGKPKG RFT+CFGNLIQRSYKAL +FQPKKDR+KQN+SSGSTKNVN+ VK+SESKSKN IDK+KGRRIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

XP_011650374.1 uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus]1.8e-8087.98Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINLVC+S
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
        FSLVNLCGKPKG RFT+CFGNLIQRSYKALT+FQPKKDR+KQN+SSGSTK VN+ VK+SESKSKN +DK+KG RIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

XP_011650375.1 uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus]3.0e-7585.25Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINL    
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
          LVNLCGKPKG RFT+CFGNLIQRSYKALT+FQPKKDR+KQN+SSGSTK VN+ VK+SESKSKN +DK+KG RIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

TrEMBL top hitse value%identityAlignment
A0A0A0L6R0 Uncharacterized protein7.9e-7485.8Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINLVC+S
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIR
        FSLVNLCGKPKG RFT+CFGNLIQRSYKALT+FQPKKDR+KQN+SSGSTK VN+ VK+SESKSKN +DKI  ++ R
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIR

A0A1S3BKH3 uncharacterized protein LOC103490841 isoform X15.1e-8188.52Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINLVC+S
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
        FSLVNLCGKPKG RFT+CFGNLIQRSYKAL +FQPKKDR+KQN+SSGSTKNVN+ VK+SESKSKN IDK+KGRRIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

A0A1S3BL45 uncharacterized protein LOC103490841 isoform X28.5e-7685.79Show/hide
Query:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS
        A VSKE+ VLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINL    
Subjt:  AKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVCSS

Query:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT
          LVNLCGKPKG RFT+CFGNLIQRSYKAL +FQPKKDR+KQN+SSGSTKNVN+ VK+SESKSKN IDK+KGRRIRLLTFTCT
Subjt:  FSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT

A0A5A7TG76 Uncharacterized protein9.5e-4388.68Show/hide
Query:  KLKAKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLV
        K++A VSKE+ VLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIA+SIAINLV
Subjt:  KLKAKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLV

Query:  CSSFSL
        C+SFSL
Subjt:  CSSFSL

A0A7J7G8J5 Uncharacterized protein1.5e-0835.76Show/hide
Query:  ITLKLKAKVSKESNVLVTVYSE-KQEPRLAVNRYQRDD-----VNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLK-NKQP
        + L+ +    KE  VLV VY E  ++ RL+ N + RD       +    +Q K  A   GYNRR +LL YS+RLR SA+S  S  +  P+P+P + N QP
Subjt:  ITLKLKAKVSKESNVLVTVYSE-KQEPRLAVNRYQRDD-----VNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLK-NKQP

Query:  IAKSIAINLVCSSFSLVNLCGKPKGARFT---TCFGNLIQRSYKALTNFQPKKDRKKQNKSSGST
        + + I +             GK KG++ T   +C GNL       L +FQ KK+RKK+ ++  ST
Subjt:  IAKSIAINLVCSSFSLVNLCGKPKGARFT---TCFGNLIQRSYKALTNFQPKKDRKKQNKSSGST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACTCTCTCTCTATTACTCTGAAACTCAAGGCAAAGGTCTCAAAAGAGAGTAATGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTAAA
TCGCTACCAACGTGATGACGTGAATAAAGCAGTGAGAAATCAATGGAAGCAAGATGCGGCTAATAAAGGATACAATAGGAGAACTGAACTCCTCAAGTATTCTCAACGCC
TTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACACCGGAGCCGATTCCTTTAAAGAACAAACAACCTATCGCAAAAAGCATAGCGATTAATCTTGTATGC
TCTTCCTTTTCTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTGCCAGATTTACAACTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAATTTTCAGCC
AAAGAAGGATAGAAAAAAGCAGAACAAAAGCAGTGGATCTACCAAGAATGTTAATGATAATGTAAAAAGCAGTGAATCAAAAAGCAAGAATAACATTGATAAAATAAAGG
GCAGAAGGATAAGACTACTGACATTTACATGCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACTCTCTCTCTATTACTCTGAAACTCAAGGCAAAGGTCTCAAAAGAGAGTAATGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTAAA
TCGCTACCAACGTGATGACGTGAATAAAGCAGTGAGAAATCAATGGAAGCAAGATGCGGCTAATAAAGGATACAATAGGAGAACTGAACTCCTCAAGTATTCTCAACGCC
TTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACACCGGAGCCGATTCCTTTAAAGAACAAACAACCTATCGCAAAAAGCATAGCGATTAATCTTGTATGC
TCTTCCTTTTCTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTGCCAGATTTACAACTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAATTTTCAGCC
AAAGAAGGATAGAAAAAAGCAGAACAAAAGCAGTGGATCTACCAAGAATGTTAATGATAATGTAAAAAGCAGTGAATCAAAAAGCAAGAATAACATTGATAAAATAAAGG
GCAGAAGGATAAGACTACTGACATTTACATGCACTTAA
Protein sequenceShow/hide protein sequence
MVNSLSITLKLKAKVSKESNVLVTVYSEKQEPRLAVNRYQRDDVNKAVRNQWKQDAANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIAKSIAINLVC
SSFSLVNLCGKPKGARFTTCFGNLIQRSYKALTNFQPKKDRKKQNKSSGSTKNVNDNVKSSESKSKNNIDKIKGRRIRLLTFTCT