CuGenDBv2

Gene ID	HG10003087
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	Chr11:17242068..17243612
RNA-Seq Expression	HG10003087
Synteny	HG10003087
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

8.0e-132

92.57

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSPSSHHT HFSFRPF+SLRTRNP   SSSS FTIRATADNG+G+SGGSATVAVETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA

Query:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.3e-134

94.01

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP--SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAA
        MSSMALFSPSSHLST SP SHHT HFSFRPF+SLRTRNP  SSSS FTIRATADNG+G+SGGSATV+VETPVEQKDPEPAK   EEQESLAGTNGSVAAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP--SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAA

Query:  EE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

2.8e-132

92.94

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSPSSHHT HFSFRPF+SLRTRNP   SSSS FTIRATADNG+G+SGGSATVAVETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA

Query:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

5.6e-117

84.09

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Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH  HF  RPF+SLR+RNPSS         ADNG+G+SGGS  VAVE  V QKDPEPA   +E++ESLA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE

Query:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
        V VV KFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSLT
Subjt:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT

Query:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

3.0e-139

95.45

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE
        MSSMALFSPSSHLSTLSPSSHH  HFSFRPF+SLRTRNPSSSS FTIRATADNG+G+SGGSA VAVETPVEQKDPEPAKAV EEQESLAGTNGSVAAAEE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE

Query:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
        VEVV KFEDPKW+NGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
Subjt:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT

Query:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDE SGSGKM
Subjt:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

6.4e-135

94.01

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP--SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAA
        MSSMALFSPSSHLST SP SHHT HFSFRPF+SLRTRNP  SSSS FTIRATADNG+G+SGGSATV+VETPVEQKDPEPAK   EEQESLAGTNGSVAAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP--SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAA

Query:  EE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        EE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  EE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

A0A1S3BLD8 uncharacterized protein LOC103490842

1.3e-132

92.94

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSPSSHHT HFSFRPF+SLRTRNP   SSSS FTIRATADNG+G+SGGSATVAVETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA

Query:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A5A7TG76 Uncharacterized protein

3.9e-132

92.57

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA
        MSSMALFSPSSHLSTLSPSSHHT HFSFRPF+SLRTRNP   SSSS FTIRATADNG+G+SGGSATVAVETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNP---SSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAA

Query:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVV KFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

3.5e-117

83.71

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH  HF  RPF+SLR+RNPSS         ADNG+G+SGGS  VAVE+ V QKDPEP   V+E+QE LA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE

Query:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
        V VV KFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSLT
Subjt:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT

Query:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        GVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

2.7e-117

84.09

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH  HF  RPF+SLR+RNPSS         ADNG+G+SGGS  VAVE  V QKDPEPA   +E++ESLA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEE

Query:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT
        V VV KFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSLT
Subjt:  VEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLT

Query:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM
        GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+KKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  GVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

1.9e-72

55.56

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTI-RATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEE-------QESLAGTNGS
        SMALFSP        P S    + +  P  S    +    S  ++ RA++DNG+            +PV +  P+PA   +EE       + S A  NG+
Subjt:  SMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTI-RATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEE-------QESLAGTNGS

Query:  V---AAAEEVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFF
        V   A     E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFF
Subjt:  V---AAAEEVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFF

Query:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGS
        MAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S +
Subjt:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.7e-76

58.05

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVE--QKDPEPAKAVLEEQESLAGTNGSVAAAE--
        MALFSP    S+L  + +    FSF   +S R      S     RA++D+GS     + +V    PVE   K+P  +   ++++E+    N +V   E  
Subjt:  MALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVE--QKDPEPAKAVLEEQESLAGTNGSVAAAE--

Query:  EVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
          E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSL
Subjt:  EVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQ---DETSGSGK
        TGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+   DE+ GS K
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQ---DETSGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

1.2e-77

58.05

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVE--QKDPEPAKAVLEEQESLAGTNGSVAAAE--
        MALFSP    S+L  + +    FSF   +S R      S     RA++D+GS     + +V    PVE   K+P  +   ++++E+    N +V   E  
Subjt:  MALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVE--QKDPEPAKAVLEEQESLAGTNGSVAAAE--

Query:  EVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
          E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFVDSL
Subjt:  EVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQ---DETSGSGK
        TGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W+   DE+ GS K
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQ---DETSGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

1.4e-73

55.56

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTI-RATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEE-------QESLAGTNGS
        SMALFSP        P S    + +  P  S    +    S  ++ RA++DNG+            +PV +  P+PA   +EE       + S A  NG+
Subjt:  SMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTI-RATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEE-------QESLAGTNGS

Query:  V---AAAEEVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFF
        V   A     E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFF
Subjt:  V---AAAEEVEVVGKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFF

Query:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGS
        MAYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ +K L DETT YDKQWQA W++  S +
Subjt:  MAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCAATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACACAAACCATTTCTCCTTCAGACCCTTTGCTTCTCTCAGAACCAG
AAACCCTTCTTCTTCCTCTTTCTTCACTATCAGGGCCACTGCTGACAATGGCTCCGGAGTTTCAGGTGGTTCAGCCACTGTTGCAGTAGAAACCCCCGTCGAACAGAAGG
ATCCGGAGCCGGCCAAGGCTGTACTAGAAGAGCAAGAGAGCCTCGCCGGAACCAATGGATCGGTGGCGGCTGCTGAAGAAGTCGAGGTGGTTGGCAAGTTTGAAGACCCT
AAATGGGTTAATGGGACTTGGGATTTGAATCAATTCCAGAAGAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAATGGTTGGAAAACAA
TCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAAGCTGAGCTACTCAATGGCC
GTGCAGCCATGGTAGGGTTCTTCATGGCTTACTTCGTCGATAGCTTGACTGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTTGCT
GTGGTGGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTATAAAGAAGCTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGA
AACCTCAGGCTCAGGCAAAATGTAA

mRNA sequence

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Protein sequence

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MSSMALFSPSSHLSTLSPSSHHTNHFSFRPFASLRTRNPSSSSFFTIRATADNGSGVSGGSATVAVETPVEQKDPEPAKAVLEEQESLAGTNGSVAAAEEVEVVGKFEDP
KWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVA
VVGVLLIRKNEDIETIKKLIDETTFYDKQWQATWQDETSGSGKM

HG10003087 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome