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HG10003096 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003096
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationChr11:17336370..17336693
RNA-Seq ExpressionHG10003096
SyntenyHG10003096
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577661.1 hypothetical protein SDJN03_25235, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1571.3Show/hide
Query:  MENPALGGGGDGGDGAGAGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGVDG
        +ENPA  GGGDGGDGA AG G + G   GPGGDGGLSGI  GPG G DSI GGEAI GG VGGAA GGV+ML GG+A+      GGGVVGGAATG GV+G
Subjt:  MENPALGGGGDGGDGAGAGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGVDG

Query:  GGAAAEAGPGAGEGD
        GGAA  AGPGAGEGD
Subjt:  GGAAAEAGPGAGEGD

XP_016900591.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]6.5e-2480Show/hide
Query:  MENPALGGGGDGGD--GAGAGGGGDIGLELGPGGDGGLSGIGPGAGLDSIGGGEAIV-GGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGAAA
        MENPALGGG DGGD  GAGAGGG DIG  L  GGDGGLSGIGPGAGL SIGGG+AI+ GG+ GG AAGGVEML GG+A+GGGVVGG+ATG GVDGGGAA 
Subjt:  MENPALGGGGDGGD--GAGAGGGGDIGLELGPGGDGGLSGIGPGAGLDSIGGGEAIV-GGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGAAA

Query:  EAGPGAGEGD
        EAGPG GEGD
Subjt:  EAGPGAGEGD

XP_023007607.1 glycine-rich protein 5-like [Cucurbita maxima]3.0e-1366.67Show/hide
Query:  MENPALGGGGDGGDGAG--AGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGV
        +ENPA GGGGDGGDG G  AG G + G   GPGGDGGLSGI  GPG G DSI GGEAI GG VGGAA GGV+ML GG+A+      GG VVGGAA G G+
Subjt:  MENPALGGGGDGGDGAG--AGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGV

Query:  DGGGAAAEAGPGAGEGD
        +GG A   AGPGAGEGD
Subjt:  DGGGAAAEAGPGAGEGD

XP_031738671.1 glycine-rich cell wall structural protein 1-like [Cucumis sativus]3.6e-1475.25Show/hide
Query:  MENPALGGGGDGGDGAGAGG--GGDIGLELGPGGDGGLSGI-GPGAG--LDSIGGGEAIVGGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGA
        MENPAL G  DGG GAGAG   GGDIGL L  GGDGG SGI GPGAG  L SIGGG+AI+GG+  GAAAGGVEML GG+A+GGGVVGG ATG GVDGGGA
Subjt:  MENPALGGGGDGGDGAGAGG--GGDIGLELGPGGDGGLSGI-GPGAG--LDSIGGGEAIVGGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGA

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A1S4DX83 glycine-rich cell wall structural protein 1-like3.2e-2480Show/hide
Query:  MENPALGGGGDGGD--GAGAGGGGDIGLELGPGGDGGLSGIGPGAGLDSIGGGEAIV-GGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGAAA
        MENPALGGG DGGD  GAGAGGG DIG  L  GGDGGLSGIGPGAGL SIGGG+AI+ GG+ GG AAGGVEML GG+A+GGGVVGG+ATG GVDGGGAA 
Subjt:  MENPALGGGGDGGD--GAGAGGGGDIGLELGPGGDGGLSGIGPGAGLDSIGGGEAIV-GGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGAAA

Query:  EAGPGAGEGD
        EAGPG GEGD
Subjt:  EAGPGAGEGD

A0A6J1KZ66 glycine-rich protein 5-like1.5e-1366.67Show/hide
Query:  MENPALGGGGDGGDGAG--AGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGV
        +ENPA GGGGDGGDG G  AG G + G   GPGGDGGLSGI  GPG G DSI GGEAI GG VGGAA GGV+ML GG+A+      GG VVGGAA G G+
Subjt:  MENPALGGGGDGGDGAG--AGGGGDIGLELGPGGDGGLSGI--GPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDAS------GGGVVGGAATGDGV

Query:  DGGGAAAEAGPGAGEGD
        +GG A   AGPGAGEGD
Subjt:  DGGGAAAEAGPGAGEGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCCCGCGCTCGGCGGCGGAGGCGACGGCGGCGACGGAGCTGGCGCCGGAGGCGGCGGAGACATTGGGCTTGAACTTGGGCCTGGAGGCGATGGTGGGCTGTC
GGGCATTGGGCCTGGGGCTGGGCTCGATTCCATAGGCGGTGGAGAAGCTATCGTCGGTGGGATGGTGGGAGGAGCCGCCGCCGGTGGAGTTGAGATGCTTGTCGGCGGTG
ACGCTTCAGGGGGCGGTGTAGTCGGGGGAGCTGCAACCGGCGATGGGGTTGACGGCGGCGGTGCGGCGGCGGAGGCGGGACCTGGAGCAGGGGAGGGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCCCGCGCTCGGCGGCGGAGGCGACGGCGGCGACGGAGCTGGCGCCGGAGGCGGCGGAGACATTGGGCTTGAACTTGGGCCTGGAGGCGATGGTGGGCTGTC
GGGCATTGGGCCTGGGGCTGGGCTCGATTCCATAGGCGGTGGAGAAGCTATCGTCGGTGGGATGGTGGGAGGAGCCGCCGCCGGTGGAGTTGAGATGCTTGTCGGCGGTG
ACGCTTCAGGGGGCGGTGTAGTCGGGGGAGCTGCAACCGGCGATGGGGTTGACGGCGGCGGTGCGGCGGCGGAGGCGGGACCTGGAGCAGGGGAGGGAGATTGA
Protein sequenceShow/hide protein sequence
MENPALGGGGDGGDGAGAGGGGDIGLELGPGGDGGLSGIGPGAGLDSIGGGEAIVGGMVGGAAAGGVEMLVGGDASGGGVVGGAATGDGVDGGGAAAEAGPGAGEGD