; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003125 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003125
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationChr11:17692754..17693163
RNA-Seq ExpressionHG10003125
SyntenyHG10003125
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041077.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]2.2e-3775.19Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSS RTFVRTN SAKSSSS FPLPSKS APSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]7.7e-4397.03Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSS RTFVRTN SAKSSSSPFPLPSKS APSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]6.6e-4296.04Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSS RTFVRTN SAKSSSS FPLPSKS APSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]2.8e-3788.12Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSS R  VRT    KS SSPFPLPSKS APSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]4.2e-4193.07Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSS RTFVRTN SAKSSSSPFPLP+KS APSVRRFSLARSPSELGC+QSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCT PG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein6.8e-3796.7Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSS RTFVRTN SAKSSSSPFPLPSKS APSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X13.2e-4296.04Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASACQRIASRISQSS RTFVRTN SAKSSSS FPLPSKS APSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X25.8e-3695.6Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSS RTFVRTN SAKSSSS FPLPSKS APSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

A0A5A7THI0 Protein NUCLEAR FUSION DEFECTIVE 61.1e-3775.19Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG
        MASACQRIASRISQSS RTFVRTN SAKSSSS FPLPSKS APSVRRFSLA                            RSPSELGCVQSLLPFHDAVAG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLA----------------------------RSPSELGCVQSLLPFHDAVAG

Query:  ARMISCLSTNSRSCRALSQGILCCTSPGL
        ARMISCLSTNSRSCRALSQGILCCTSPGL
Subjt:  ARMISCLSTNSRSCRALSQGILCCTSPGL

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X11.4e-3788.12Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MASAC RIASRISQSS R  VRT    KS SSPFPLPSKS APSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial2.7e-0635.64Show/hide
Query:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG
        MAS C+ ++     +      + +   KS+SS   +P   P+P       +R   +LG +QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +PG
Subjt:  MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPG

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein3.6e-2258.25Show/hide
Query:  MASACQRIASRISQSSLRTFVR--TNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SSL++ +R  T  ++ +SS+ F LPS+      R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSLRTFVR--TNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PGL
        P L
Subjt:  PGL

AT4G17310.2 unknown protein2.7e-1755.91Show/hide
Query:  MASACQRIASRISQSSLRTFVR--TNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SSL++ +R  T  ++ +SS+ F LPS+      R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSLRTFVR--TNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein2.5e-1551.04Show/hide
Query:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SS ++ +R+          +  A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.6 unknown protein2.5e-1551.04Show/hide
Query:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SS ++ +R+          +  A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein2.5e-1551.04Show/hide
Query:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SS ++ +R+          +  A +SS+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSLRTFVRT----------NPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCGTCTCTCAGAACATTCGTCCGTACGAATCCGTCGGCCAAATCTTCATCTTCTCCATTCCCTCTACC
TTCCAAATCCCCTGCACCATCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCTTCGGAGCTGGGATGCGTGCAATCACTTTTGCCATTTCACGACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCTCAGTCGTCTCTCAGAACATTCGTCCGTACGAATCCGTCGGCCAAATCTTCATCTTCTCCATTCCCTCTACC
TTCCAAATCCCCTGCACCATCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCTTCGGAGCTGGGATGCGTGCAATCACTTTTGCCATTTCACGACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAA
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSLRTFVRTNPSAKSSSSPFPLPSKSPAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPGL