; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003144 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003144
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptiontRNA_edit domain-containing protein
Genome locationChr11:17952021..17957490
RNA-Seq ExpressionHG10003144
SyntenyHG10003144
Gene Ontology termsGO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domainsIPR007214 - YbaK/aminoacyl-tRNA synthetase-associated domain
IPR036754 - YbaK/aminoacyl-tRNA synthetase-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448863.1 PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo]2.1e-12394.12Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MG+ESEA AEQNSMEALAKLEHRQTLILHRIS LEL YLPNLDS PSS+PSDGAD DTVARLS ILR NAVNDFSFKRVPSDYYDW LEARRDVLDAAS+
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAE VKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

XP_022951583.1 uncharacterized protein LOC111454353 [Cucurbita moschata]5.2e-11487.39Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTE+ A AE+NSMEALAKLE+RQTLI++RISKLELAYLPNLDS PS I S+GADGDTVARLS ILR NAVNDFSFKRVPSDYYDW LEARRDVL+AASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQA SHVVDCS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY HN VTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

XP_023005520.1 uncharacterized protein LOC111498483 [Cucurbita maxima]1.3e-11286.55Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTE+ A AE+NSMEALAKLE+RQTLI++RISKLELAYLPNLDS PS I SD ADGDTV+RLS ILR NAVNDFSF RVPSDYYDW LEARRDVL+AASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQA SHVVDCS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY HN VTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

XP_023538668.1 uncharacterized protein LOC111799544 [Cucurbita pepo subsp. pepo]1.7e-11286.55Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTE+ A AE+NSMEALAKLE+RQTLI++RI KLELAYLPNLDS PS I SD ADGDTV+RLS ILR NAVNDFSFKRVPSDYYDW LEARRDVL+AASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQA SHVVDCS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY HN VTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

XP_038903466.1 uncharacterized protein LOC120090048 [Benincasa hispida]2.2e-12595.8Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTESEA AEQN MEALAKLEHRQTLILHRISKLELAYLPNLDSA SS+PSDG DGDTVARLS ILR N+VNDFSFKRVPSDYYDWPLEARRDVLDAASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETS KLTGYEHNGVTCIGMRTDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

TrEMBL top hitse value%identityAlignment
A0A0A0L4A0 tRNA_edit domain-containing protein1.0e-10784.1Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGA-DGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAAS
        MGTESEA AEQNSMEA                 L+L  LPNLDS PSS+PSDGA D DTVARLS IL  NAVNDFSFKRVPSDYYDWPLEARRDVLDAAS
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGA-DGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAAS

Query:  VDHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEA
        +DHLCKSIVLVNTQAPSH+VDCSDRNNSKYYIVVVQYTAKFNAET++SFLYSLNDGKIAKKKFNLRLAPEE S KLTGYEHNGVTCIGM+TDIPVILDEA
Subjt:  VDHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEA

Query:  IGKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
        I KLNPDYFWLGGGE DLKLGIRTSEFIN+VKPFIIKCS
Subjt:  IGKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

A0A1S3BLB4 uncharacterized protein LOC1034908951.0e-12394.12Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MG+ESEA AEQNSMEALAKLEHRQTLILHRIS LEL YLPNLDS PSS+PSDGAD DTVARLS ILR NAVNDFSFKRVPSDYYDW LEARRDVLDAAS+
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAE VKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

A0A5A7TI57 YbaK/aminoacyl-tRNA synthetase-associated domain isoform 21.8e-9692.78Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MG+ESEA AEQNSMEALAKLEHRQTLILHRIS LEL YLPNLDS PSS+PSDGAD DTVARLS ILR NAVNDFSFKRVPSDYYDW LEARRDVLDAAS+
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPV
        DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAE VKSFLYSLNDGKIAKKKFNLRLAPEETS KLTGYEHNGVTCIGM+TDIPV
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPV

A0A6J1GI39 uncharacterized protein LOC1114543532.5e-11487.39Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTE+ A AE+NSMEALAKLE+RQTLI++RISKLELAYLPNLDS PS I S+GADGDTVARLS ILR NAVNDFSFKRVPSDYYDW LEARRDVL+AASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQA SHVVDCS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY HN VTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

A0A6J1KXM4 uncharacterized protein LOC1114984836.2e-11386.55Show/hide
Query:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV
        MGTE+ A AE+NSMEALAKLE+RQTLI++RISKLELAYLPNLDS PS I SD ADGDTV+RLS ILR NAVNDFSF RVPSDYYDW LEARRDVL+AASV
Subjt:  MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASV

Query:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI
        DHLCKSIVLVNTQA SHVVDCS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY HN VTCIGM+TDIPVILDEAI
Subjt:  DHLCKSIVLVNTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAI

Query:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS
         KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Subjt:  GKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain1.2e-9273.78Show/hide
Query:  ALAKLEHRQTLILHRISKLELAYLP-NLDSAPS-SIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASVDHLCKSIVLVNTQ
        A A+LE  Q  ILH+IS LE ++LP N  +APS S+P D  + +TV RLS IL++  VNDF FKRV +DYYDWPLE+RRDVL A+SVDHLCKSIVLVNTQ
Subjt:  ALAKLEHRQTLILHRISKLELAYLP-NLDSAPS-SIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASVDHLCKSIVLVNTQ

Query:  APSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAIGKLNPDYFWLGGG
        A S+++DCSD NNSKYY+VVVQYTA+FNAE VK FLYSLN+GKI KK+FNLRLAPEETS+KLTG+EHNGVTCIGM+T+IPVILDEAI KL PD+FWLGGG
Subjt:  APSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAIGKLNPDYFWLGGG

Query:  EIDLKLGIRTSEFINFVKPFIIKCS
        EIDLKLG+RTSEF+ FVKPFI+ CS
Subjt:  EIDLKLGIRTSEFINFVKPFIIKCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACTGAGAGTGAAGCAACGGCAGAGCAAAACTCCATGGAAGCACTAGCGAAGCTCGAACACAGGCAGACCCTAATCCTCCATCGAATTTCAAAGCTCGAGCTCGC
ATACCTTCCAAATCTTGACTCTGCACCTTCCTCTATTCCCTCTGATGGCGCAGATGGCGACACCGTTGCTCGACTCTCTGGCATTCTCAGAGCCAACGCTGTCAACGACT
TTTCCTTCAAGAGAGTGCCTTCCGATTACTACGATTGGCCTCTCGAAGCGCGACGGGACGTTCTTGATGCCGCTTCCGTCGACCATCTCTGCAAGAGCATCGTTCTGGTA
AATACTCAAGCCCCATCCCATGTTGTTGATTGCAGTGATCGCAACAATTCAAAATACTATATTGTTGTTGTTCAGTATACTGCCAAATTTAATGCTGAAACTGTTAAAAG
CTTCCTTTATTCACTCAACGATGGCAAGATAGCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGACATCTGTGAAACTAACTGGATATGAGCATAATGGAGTGA
CGTGCATTGGCATGAGAACAGATATTCCAGTGATTTTGGATGAAGCGATTGGGAAACTAAATCCTGATTATTTTTGGTTGGGCGGTGGGGAAATCGACCTGAAGTTGGGG
ATCAGGACATCTGAGTTCATAAACTTTGTTAAACCCTTCATCATCAAGTGTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGACTGAGAGTGAAGCAACGGCAGAGCAAAACTCCATGGAAGCACTAGCGAAGCTCGAACACAGGCAGACCCTAATCCTCCATCGAATTTCAAAGCTCGAGCTCGC
ATACCTTCCAAATCTTGACTCTGCACCTTCCTCTATTCCCTCTGATGGCGCAGATGGCGACACCGTTGCTCGACTCTCTGGCATTCTCAGAGCCAACGCTGTCAACGACT
TTTCCTTCAAGAGAGTGCCTTCCGATTACTACGATTGGCCTCTCGAAGCGCGACGGGACGTTCTTGATGCCGCTTCCGTCGACCATCTCTGCAAGAGCATCGTTCTGGTA
AATACTCAAGCCCCATCCCATGTTGTTGATTGCAGTGATCGCAACAATTCAAAATACTATATTGTTGTTGTTCAGTATACTGCCAAATTTAATGCTGAAACTGTTAAAAG
CTTCCTTTATTCACTCAACGATGGCAAGATAGCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGACATCTGTGAAACTAACTGGATATGAGCATAATGGAGTGA
CGTGCATTGGCATGAGAACAGATATTCCAGTGATTTTGGATGAAGCGATTGGGAAACTAAATCCTGATTATTTTTGGTTGGGCGGTGGGGAAATCGACCTGAAGTTGGGG
ATCAGGACATCTGAGTTCATAAACTTTGTTAAACCCTTCATCATCAAGTGTAGTTAG
Protein sequenceShow/hide protein sequence
MGTESEATAEQNSMEALAKLEHRQTLILHRISKLELAYLPNLDSAPSSIPSDGADGDTVARLSGILRANAVNDFSFKRVPSDYYDWPLEARRDVLDAASVDHLCKSIVLV
NTQAPSHVVDCSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEHNGVTCIGMRTDIPVILDEAIGKLNPDYFWLGGGEIDLKLG
IRTSEFINFVKPFIIKCS