CuGenDBv2

Gene ID	HG10003147
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome location	Chr11:17993937..17999702
RNA-Seq Expression	HG10003147
Synteny	HG10003147
Gene Ontology terms	GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]

2.6e-64

94.49

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]

1.7e-63

93.7

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]

4.5e-64

95.28

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

XP_023005602.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima]

1.7e-63

93.7

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]

5.3e-65

96.06

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNL S+ILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5J8 Uncharacterized protein

1.3e-64

94.49

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

1.3e-64

94.49

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAG+L+NLGSKILGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLP NDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGG+PEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

A0A6J1GGJ2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like

8.3e-64

93.7

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

2.2e-64

95.28

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGS+ILGGNGVV RSI SSLR RSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KASKIPFAPKVYPYDNLRVELGGEPEA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like

8.3e-64

93.7

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLSNLGSK+LGGNGVVGRSI SSLRLRSGMGLPVG+HIVPDKPLPVNDELVWDNGT FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEPEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASKIPFAPKVYPYDNLRVELGGEPEA

SwissProt top hits

e value

%identity

Alignment

Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

4.2e-57

82.4

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP

Arabidopsis top hits

e value

%identity

Alignment

AT5G47570.1 unknown protein

3.0e-58

82.4

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Query:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MAGRLS + S+I+GGNGVV RS+ SSLR R+GMGLPVG+HIVPDKPL VNDEL+WDNGT+FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFAPKVYPYDNLRVELGGEP
        KASK+PF P+VYPYDNLRVELGGEP
Subjt:  KASKIPFAPKVYPYDNLRVELGGEP

Sequences

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CDS sequence

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ATGGCAGGCAGGCTAAGCAATTTGGGTTCAAAGATCCTTGGTGGAAATGGTGTTGTTGGTCGCTCAATCGTTTCATCTCTTCGACTTCGCTCCGGTATGGGCCTTCCTGT
CGGCAGACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTTCTTTTCCCGAGCCCTGTATTGATCGTATTGCAGATACGGTTG
GGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGCGCCAAAA
GTGTATCCTTATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

mRNA sequence

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Protein sequence

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MAGRLSNLGSKILGGNGVVGRSIVSSLRLRSGMGLPVGRHIVPDKPLPVNDELVWDNGTSFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPK
VYPYDNLRVELGGEPEA

HG10003147 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome