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HG10003191 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003191
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionycf49-like protein
Genome locationChr11:18589932..18590189
RNA-Seq ExpressionHG10003191
SyntenyHG10003191
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577584.1 hypothetical protein SDJN03_25158, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1566.67Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MS +STFL+SFS PK PISSS  SSLPTSRD AATSQL T I  RR       DSK++VVLLGTGFTL+L GP   SAATE  S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

KAG7015633.1 hypothetical protein SDJN02_23270, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-1667.86Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MS +STFL+SFS PK PISSS SSSLPTSRD AATSQL T I  RR       DSK++VVLLGTGFTL+L GP   SAATE  S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

XP_004147956.1 uncharacterized protein LOC101205605 [Cucumis sativus]2.6e-1567.86Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MSLTS  LYSFS PKSP        LP S D A T QL T + FRR    LGF SKTMVVLLGTGFTLAL GPESASAATEL S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

XP_022152779.1 uncharacterized protein LOC111020415 [Momordica charantia]3.0e-1669.41Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        M LTST L+SFSNPK PISSS SSS P SRD AA S+    I FRR    GL  DSK+MVVLLGTGFTLAL GPESASAA EL +
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

XP_023551730.1 uncharacterized protein LOC111809617 [Cucurbita pepo subsp. pepo]1.6e-1769.05Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MS +STFL+SFS PK PISSS SSSLPTSRD AATSQL T I  RR   G   DSK+++VL+GTGFT +L GPESASAATE  S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

TrEMBL top hitse value%identityAlignment
A0A0A0L4G0 Uncharacterized protein1.2e-1567.86Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MSLTS  LYSFS PKSP        LP S D A T QL T + FRR    LGF SKTMVVLLGTGFTLAL GPESASAATEL S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

A0A1S3BLS2 ycf49-like protein1.6e-1566.67Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MSLTS  LYSFS PKSP        LP S D A T+QL T + FRR    LGF SK MVVLLGTGFTLAL GPESASAATEL S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

A0A5D3D7E0 Ycf49-like protein1.6e-1566.67Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        MSLTS  LYSFS PKSP        LP S D A T+QL T + FRR    LGF SK MVVLLGTGFTLAL GPESASAATEL S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

A0A6J1DH09 uncharacterized protein LOC1110204151.5e-1669.41Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS
        M LTST L+SFSNPK PISSS SSS P SRD AA S+    I FRR    GL  DSK+MVVLLGTGFTLAL GPESASAA EL +
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHS

A0A6J1KVA7 uncharacterized protein LOC1114985072.1e-1569.32Show/hide
Query:  MSLTSTFLYSFSNPKSPISSSPSSSLPTS-RDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPES--ASAATELHS
        MSLTST L+SFSNPK PISSS SSSLP S  D AA+SQ  T I F R    GL  DSKTMVVL+GTG TLAL GPES  A+AATEL S
Subjt:  MSLTSTFLYSFSNPKSPISSSPSSSLPTS-RDLAATSQLTTRIPFRR-CAPGLGFDSKTMVVLLGTGFTLALRGPES--ASAATELHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCACTTCCACCTTCTTATATTCCTTCTCAAATCCCAAATCCCCCATTTCTTCTTCTCCTTCTTCCTCACTCCCCACCTCCAGAGATTTGGCCGCTACTTCTCA
ACTCACTACTAGAATTCCATTCCGGAGATGCGCCCCCGGTCTGGGTTTTGACTCCAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTTGCCCTTCGGGGACCTG
AATCCGCTTCTGCTGCCACCGAATTGCATTCGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCACTTCCACCTTCTTATATTCCTTCTCAAATCCCAAATCCCCCATTTCTTCTTCTCCTTCTTCCTCACTCCCCACCTCCAGAGATTTGGCCGCTACTTCTCA
ACTCACTACTAGAATTCCATTCCGGAGATGCGCCCCCGGTCTGGGTTTTGACTCCAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTTGCCCTTCGGGGACCTG
AATCCGCTTCTGCTGCCACCGAATTGCATTCGAAATGA
Protein sequenceShow/hide protein sequence
MSLTSTFLYSFSNPKSPISSSPSSSLPTSRDLAATSQLTTRIPFRRCAPGLGFDSKTMVVLLGTGFTLALRGPESASAATELHSK