; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003253 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003253
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description(-)-germacrene D synthase-like
Genome locationChr11:19354466..19354984
RNA-Seq ExpressionHG10003253
SyntenyHG10003253
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005630 - Terpene synthase, metal-binding domain
IPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650090.1 hypothetical protein Csa_009864 [Cucumis sativus]2.2e-4982.91Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWALG+ YEPKYSN R +LVK+ITFIS+LDDMYDVYATLDELQLFTNAI+RWDV+CIEKLPNYMKGLYET++EVYEEI+QDI 
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D NIPFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

TYK19406.1 (-)-germacrene D synthase-like [Cucumis melo var. makuwa]9.3e-4881.2Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWA GV YEPKY N R  L K+ITFISV+DDMYDVYATLDELQLFT+AI+RWDV+CIEKLPNYMKGLYETI+EVYEEI+QDIC
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D N PFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

XP_016900585.1 PREDICTED: (-)-germacrene D synthase-like [Cucumis melo]2.0e-5084.62Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+QL FAR RVVEIYVWALGV YEPKY N R +L K+ITFISVLDDMYDVYATLDELQLFTNAI+RWDV+CIEKLPNYMKGLYETI+EVYEEI++DIC
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D NIPFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

XP_031738278.1 LOW QUALITY PROTEIN: (-)-germacrene D synthase [Cucumis sativus]2.2e-4982.91Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWALG+ YEPKYSN R +LVK+ITFIS+LDDMYDVYATLDELQLFTNAI+RWDV+CIEKLPNYMKGLYET++EVYEEI+QDI 
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D NIPFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

XP_038877743.1 LOW QUALITY PROTEIN: (-)-germacrene D synthase-like [Benincasa hispida]9.3e-4878.81Show/hide
Query:  MKLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDI
        +KL+ QL FAR+R VE YVWALG++YEPKYSNART+L KVI FIS+LDDMYDVYATL+ELQLFTN IERWDVNCI+ LPNYMKGLYE I+EVY EI+QDI
Subjt:  MKLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDI

Query:  CEDKNIPFAFDYAKEAVK
        C+D NIPFAFDYAKE +K
Subjt:  CEDKNIPFAFDYAKEAVK

TrEMBL top hitse value%identityAlignment
A0A0A0L791 Uncharacterized protein1.1e-4982.91Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWALG+ YEPKYSN R +LVK+ITFIS+LDDMYDVYATLDELQLFTNAI+RWDV+CIEKLPNYMKGLYET++EVYEEI+QDI 
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D NIPFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

A0A1S4DX89 (-)-germacrene D synthase-like5.9e-4881.2Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWA GV YEPKY N R  L K+ITFISV+DDMYDVYATLDELQLFT+AI+RWDV+CIEKLPNYMKGLYETI+EVYEEI+QDIC
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D N PFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

A0A1S4DXZ8 (-)-germacrene D synthase-like9.7e-5184.62Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+QL FAR RVVEIYVWALGV YEPKY N R +L K+ITFISVLDDMYDVYATLDELQLFTNAI+RWDV+CIEKLPNYMKGLYETI+EVYEEI++DIC
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D NIPFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

A0A5D3BQ16 Putative terpene synthase 2 isoform X11.1e-4168.97Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK++L FAR+RVVE Y+WALG+YYEPKYS+ARTLL K+I  I+++DDMYD Y TL+ELQLFTN I RWD+NCIE+LPNYMK LYE I+++YE   QD+C
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAV
         D NIP+AFDYAKE +
Subjt:  EDKNIPFAFDYAKEAV

A0A5D3D750 (-)-germacrene D synthase-like4.5e-4881.2Show/hide
Query:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC
        KLK+ L FAR RVVEIYVWA GV YEPKY N R  L K+ITFISV+DDMYDVYATLDELQLFT+AI+RWDV+CIEKLPNYMKGLYETI+EVYEEI+QDIC
Subjt:  KLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDIC

Query:  EDKNIPFAFDYAKEAVK
        +D N PFAFDYAKEA+K
Subjt:  EDKNIPFAFDYAKEAVK

SwissProt top hitse value%identityAlignment
B5A435 Sesquiterpene synthase1.6e-2952.73Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        FAR+R+VE Y W LGVY+EP+YS AR +++KV T IS +DD+YD Y TLDEL+LFT A++RWDV  +++LP YMK  Y++I++VY EI++++ +++   F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YAKE +K
Subjt:  AFDYAKEAVK

E3W208 Sesquiterpene synthase2.7e-2951.82Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        FAR+R+VE Y W LGVY+EP+YS AR +++KV T IS +DD+YD Y TLDEL+LFT AI+RWD+  +++LP YMK  Y+++++VY EI++++ +++   F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YAKE +K
Subjt:  AFDYAKEAVK

F6M8H4 Probable sesquiterpene synthase1.6e-2953.64Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        FAR+R+VE Y W LGVY+EP+YS AR +++KV T IS +DD+YD Y T+DEL+LFT AI RWDV  +++LP YMK  Y++I+EVY EI++++ +++   F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YAKE +K
Subjt:  AFDYAKEAVK

F6M8H6 Probable sesquiterpene synthase2.7e-2951.82Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        FAR+R+VE Y W LGVY+EP+YS AR +++KV T IS +DD+YD Y TLDEL+LFT AI+RWD+  +++LP YMK  Y+++++VY EI++++ +++   F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YAKE +K
Subjt:  AFDYAKEAVK

F6M8H7 Probable sesquiterpene synthase1.2e-2952.73Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        FAR+R+VE Y W LGVY+EP+YS AR +++KV T IS +DD+YD Y TLDEL+LFT A++RWDV  +++LP YMK  Y++I++VY EI++++    ++ F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YAKE +K
Subjt:  AFDYAKEAVK

Arabidopsis top hitse value%identityAlignment
AT1G70080.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein9.4e-2238.18Show/hide
Query:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF
        + RER+ E Y WA G+YYEP+YS AR +L K I  + ++D+ +DVY T+DE++    AIERWD + ++ LP+Y+K ++ T  ++++E+++ +  +    F
Subjt:  FARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPF

Query:  AFDYAKEAVK
           YA E ++
Subjt:  AFDYAKEAVK

AT2G24210.1 terpene synthase 103.6e-2143.27Show/hide
Query:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE
        L +QL FAR+R+VE Y W +G   EP+Y   R  + K+   ++ +DD+YD+Y TL+ELQLFT A E WD+N +++LP YM+  +  I      I  +I  
Subjt:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE

Query:  DKNI
         KNI
Subjt:  DKNI

AT4G16730.1 terpene synthase 022.4e-2543.27Show/hide
Query:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE
        L +QL F R+R+ E Y W +G++YEP++   R +L K+   I ++DD+YD+Y TL+EL+LFTN +E+WDVN +E+LPNYM+  +  +     +I  D+  
Subjt:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE

Query:  DKNI
        DK +
Subjt:  DKNI

AT4G16740.1 terpene synthase 039.4e-2242.98Show/hide
Query:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE
        L + L F R+R+ E Y  ++GV YEP+++  R +L KV   I+ +DD+YD+Y TL+ELQLFT  +E+WDVN +E+LPNYMK  +  +V    +I   +  
Subjt:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE

Query:  DKNIPFAFDYAKEA
        DK       Y KE+
Subjt:  DKNIPFAFDYAKEA

AT4G16740.2 terpene synthase 031.9e-2243.1Show/hide
Query:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE
        L + L F R+R+ E Y  ++GV YEP+++  R +L KV   I+ +DD+YD+Y TL+ELQLFT  +E+WDVN +E+LPNYMK  +  +V    +I   +  
Subjt:  LKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICE

Query:  DKNIPFAFDYAKEAVK
        DK       Y KE+V+
Subjt:  DKNIPFAFDYAKEAVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGAAGCAGCAATTATGTTTTGCACGAGAAAGGGTGGTGGAGATCTATGTTTGGGCATTGGGAGTATACTATGAACCAAAATACTCTAATGCTAGAACATTATT
AGTCAAAGTTATTACTTTTATATCTGTTCTTGATGATATGTATGATGTCTATGCCACACTTGATGAACTTCAATTATTCACCAATGCAATTGAAAGGTGGGATGTGAATT
GCATTGAGAAGCTTCCAAATTACATGAAAGGACTTTATGAAACTATAGTTGAAGTTTATGAAGAGATTCAACAAGATATTTGCGAAGATAAAAATATTCCATTTGCATTT
GATTATGCAAAAGAAGCGGTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGAAGCAGCAATTATGTTTTGCACGAGAAAGGGTGGTGGAGATCTATGTTTGGGCATTGGGAGTATACTATGAACCAAAATACTCTAATGCTAGAACATTATT
AGTCAAAGTTATTACTTTTATATCTGTTCTTGATGATATGTATGATGTCTATGCCACACTTGATGAACTTCAATTATTCACCAATGCAATTGAAAGGTGGGATGTGAATT
GCATTGAGAAGCTTCCAAATTACATGAAAGGACTTTATGAAACTATAGTTGAAGTTTATGAAGAGATTCAACAAGATATTTGCGAAGATAAAAATATTCCATTTGCATTT
GATTATGCAAAAGAAGCGGTAAAATAA
Protein sequenceShow/hide protein sequence
MKLKQQLCFARERVVEIYVWALGVYYEPKYSNARTLLVKVITFISVLDDMYDVYATLDELQLFTNAIERWDVNCIEKLPNYMKGLYETIVEVYEEIQQDICEDKNIPFAF
DYAKEAVK