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HG10003269 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003269
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description4-hydroxy-4-methyl-2-oxoglutarate aldolase
Genome locationChr11:19528128..19528508
RNA-Seq ExpressionHG10003269
SyntenyHG10003269
Gene Ontology termsGO:0016829 - lyase activity (molecular function)
InterPro domainsIPR005493 - Ribonuclease E inhibitor RraA/RraA-like protein
IPR036704 - Ribonuclease E inhibitor RraA/RraA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148273.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus]2.4e-2764.04Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     G NPLKSNKKGM EKHVV+QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

XP_008448991.1 PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo]4.1e-2763.16Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKGM +KHVV+QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D DGILVSKFELSV
Subjt:  DSDGILVSKFELSV

XP_022143459.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Momordica charantia]9.1e-2762.28Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLES+GEGRVLV+DGNGSRRCALLG                                     G NPLKSNKKGM EKHV +QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

XP_023540534.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo]2.6e-2662.28Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLES+GEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKG+ EKHV + IGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

XP_038903077.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida]1.4e-2764.04Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKGM EKHVV++IGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

TrEMBL top hitse value%identityAlignment
A0A0A0L5X9 4-hydroxy-4-methyl-2-oxoglutarate aldolase1.2e-2764.04Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     G NPLKSNKKGM EKHVV+QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

A0A1S3BKF1 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.0e-2763.16Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKGM +KHVV+QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D DGILVSKFELSV
Subjt:  DSDGILVSKFELSV

A0A5D3D743 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.0e-2763.16Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLE+KGEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKGM +KHVV+QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D DGILVSKFELSV
Subjt:  DSDGILVSKFELSV

A0A6J1CPD0 4-hydroxy-4-methyl-2-oxoglutarate aldolase4.4e-2762.28Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLES+GEGRVLV+DGNGSRRCALLG                                     G NPLKSNKKGM EKHV +QIGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

A0A6J1KXS9 4-hydroxy-4-methyl-2-oxoglutarate aldolase1.3e-2662.28Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVRQLLES+GEGRVLVIDGNGSRRCALLG                                     GTNPLKSNKKG+ EKHV + IGGTLIHEGEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGILVSKFELSV
Subjt:  DSDGILVSKFELSV

SwissProt top hitse value%identityAlignment
Q46ZV6 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.7e-1336.61Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVR+ LES G+GRVLV+DG GS RCAL+GG                                      +P KS K+G  E+ V +Q+ G ++  G W+Y 
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFEL
        D+DG+LVS+ +L
Subjt:  DSDGILVSKFEL

Q8XZP1 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase2.0e-1338.39Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVR +LE  GEGRVLV+DG GS RCAL+GG                                      +P KS KK   E+ + +Q+ G  IH GEW+Y 
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFEL
        D DG+LVS+  L
Subjt:  DSDGILVSKFEL

Q9FFE0 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 23.6e-1842.98Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        L+RQ +E KG GRVLV+DG GS+RCA+LGG                                     ++P+K++KKG+ E+ V + I GT I +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D+DGILVS+ ELSV
Subjt:  DSDGILVSKFELSV

Q9FH13 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 31.0e-2050.88Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVR  LE+KGEG VLVIDG GS RCAL+G                                     G+NPLKS KKG  EK+V + IGGTLI +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGIL+SK ELSV
Subjt:  DSDGILVSKFELSV

Q9M8R9 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 12.3e-1742.98Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        L+R  LE KG GRVLV+DG GS RCA+LGG                                     ++P+K++KKG+ E+ V + I GT I +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D+DGILVS+ ELSV
Subjt:  DSDGILVSKFELSV

Arabidopsis top hitse value%identityAlignment
AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase1.6e-1842.98Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        L+R  LE KG GRVLV+DG GS RCA+LGG                                     ++P+K++KKG+ E+ V + I GT I +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D+DGILVS+ ELSV
Subjt:  DSDGILVSKFELSV

AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase2.5e-1942.98Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        L+RQ +E KG GRVLV+DG GS+RCA+LGG                                     ++P+K++KKG+ E+ V + I GT I +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D+DGILVS+ ELSV
Subjt:  DSDGILVSKFELSV

AT5G16450.2 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase2.5e-1942.98Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        L+RQ +E KG GRVLV+DG GS+RCA+LGG                                     ++P+K++KKG+ E+ V + I GT I +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLGG-------------------------------------TNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        D+DGILVS+ ELSV
Subjt:  DSDGILVSKFELSV

AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase7.2e-2250.88Show/hide
Query:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA
        LVR  LE+KGEG VLVIDG GS RCAL+G                                     G+NPLKS KKG  EK+V + IGGTLI +GEWLYA
Subjt:  LVRQLLESKGEGRVLVIDGNGSRRCALLG-------------------------------------GTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYA

Query:  DSDGILVSKFELSV
        DSDGIL+SK ELSV
Subjt:  DSDGILVSKFELSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCACATGTCACAAACGGAGATCTCCGAGTACTGCTTGGTGAGACAGCTTCTTGAAAGCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGAAG
ATGTGCATTGTTGGGAGGGACCAATCCATTGAAGTCAAACAAGAAAGGGATGGTAGAAAAGCATGTGGTTATTCAAATTGGTGGCACTCTGATTCATGAAGGAGAGTGGT
TGTATGCTGATAGTGATGGCATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCACATGTCACAAACGGAGATCTCCGAGTACTGCTTGGTGAGACAGCTTCTTGAAAGCAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGGAATGGAAGCAGAAG
ATGTGCATTGTTGGGAGGGACCAATCCATTGAAGTCAAACAAGAAAGGGATGGTAGAAAAGCATGTGGTTATTCAAATTGGTGGCACTCTGATTCATGAAGGAGAGTGGT
TGTATGCTGATAGTGATGGCATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA
Protein sequenceShow/hide protein sequence
MHHMSQTEISEYCLVRQLLESKGEGRVLVIDGNGSRRCALLGGTNPLKSNKKGMVEKHVVIQIGGTLIHEGEWLYADSDGILVSKFELSV