; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003286 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003286
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr11:19706183..19706752
RNA-Seq ExpressionHG10003286
SyntenyHG10003286
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650098.1 hypothetical protein Csa_010636 [Cucumis sativus]7.8e-8993.12Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAKVQQDEDLKDWPWPFQ+
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

XP_004148268.1 uncharacterized protein LOC101206234 [Cucumis sativus]3.5e-8993.65Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

XP_008449000.1 PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo]1.3e-9194.18Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVEG+GSNNNG  MRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

XP_023540529.1 uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo]1.8e-8590.1Show/hide
Query:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS
        MGFSI+ +P  S+SMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+TAS RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS

Query:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG G + NG   MRSAKV+QDEDLKDWPWPFQV
Subjt:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV

XP_038904159.1 uncharacterized protein LOC120090516 [Benincasa hispida]1.5e-9296.84Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSITANPS+SMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA ASARWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSN-NNGVGMRSAKVQQDEDLKDWPWPFQV
        MLV+TRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSN +NGVGMRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSN-NNGVGMRSAKVQQDEDLKDWPWPFQV

TrEMBL top hitse value%identityAlignment
A0A0A0L253 Uncharacterized protein1.7e-8993.65Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

A0A1S3BL21 uncharacterized protein LOC1034910046.3e-9294.18Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVEG+GSNNNG  MRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

A0A5D3D734 Uncharacterized protein6.3e-9294.18Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAA +S RWFGVHMVFTVLTAIFQGSVA
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV
        MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVEG+GSNNNG  MRSAKVQQDEDLKDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV

A0A6J1H1G8 uncharacterized protein LOC1114594672.5e-8589.58Show/hide
Query:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS
        MGFSI+ +P  S+SMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+TAS RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS

Query:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEG G + NG   MRSAKV+QDEDLKDWPWPFQV
Subjt:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV

A0A6J1L2J4 uncharacterized protein LOC1114985121.9e-8590.1Show/hide
Query:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS
        MGFSI+ +P  S+SMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+TAS RWFG HMVFTVLTAIFQGS
Subjt:  MGFSITANP--SSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGS

Query:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG G + NG   MRSAKV+QDEDLKDWPWPFQV
Subjt:  VAMLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VGMRSAKVQQDEDLKDWPWPFQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein3.1e-5965.38Show/hide
Query:  PSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVAMLVYTRTG
        P  S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAVSGCA A+    RW+  HM+ TVLTAIFQGSV++L++T T 
Subjt:  PSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVAMLVYTRTG

Query:  DFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGM-RSAKVQQDEDLKDWPWPFQV
        +FL  L SYVRE++ ++ILKLAGGL VV+F LEW+VL LAFFLKYYA+V+G+   NNGV M R+ KVQ +E LK+ PW FQV
Subjt:  DFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGM-RSAKVQQDEDLKDWPWPFQV

AT5G16250.1 unknown protein8.7e-6265.79Show/hide
Query:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA
        MGF    + SS +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TIAAAVSGCA A+    RW+  HMV TVLTAIFQGSV+
Subjt:  MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVA

Query:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGM-RSAKVQQDEDLKDWPWPFQV
        +L++T T  FL  LKSYVREED AVILKL GGL +V+F L+W+VL  AFFLKYYA+V+G     +GV M R+ KVQ +E+ KDWPWPFQV
Subjt:  MLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGM-RSAKVQQDEDLKDWPWPFQV

AT5G36710.1 unknown protein1.4e-5162.84Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AATASARWFGVHMVFTVLTAIFQGSVAMLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     +ATAS R +G HMV TVLTAIFQG+V++L++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AATASARWFGVHMVFTVLTAIFQGSVAMLVYTRT

Query:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWP-WPFQV
        GDFL  LKSYVREEDG VILKL+GGL V+MF LEW+VL LAF LKY  +++    +++   +R    +Q+EDLKDWP +PFQ+
Subjt:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWP-WPFQV

AT5G36800.1 unknown protein1.4e-5162.84Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AATASARWFGVHMVFTVLTAIFQGSVAMLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     +ATAS R +G HMV TVLTAIFQG+V++L++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----AATASARWFGVHMVFTVLTAIFQGSVAMLVYTRT

Query:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWP-WPFQV
        GDFL  LKSYVREEDG VILKL+GGL V+MF LEW+VL LAF LKY  +++    +++   +R    +Q+EDLKDWP +PFQ+
Subjt:  GDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWP-WPFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTCCATAACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTTCTCGGCGCCGCCTCCAG
CTGCATTTTCCTCACTCTCTCTCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTTCACATCCTCACCATCGCCGCGGCCGTCTCCGGTTGTGCCATGG
CCGCCACCGCTTCGGCTCGATGGTTCGGAGTTCACATGGTGTTCACTGTCCTGACGGCGATATTCCAAGGATCGGTGGCAATGCTGGTGTACACAAGAACAGGGGATTTT
CTGTTGGAACTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAGTGGGTTGTTCTTACTTT
GGCTTTCTTTTTGAAGTACTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTGGGTATGAGAAGTGCTAAAGTTCAGCAGGATGAGGATTTGAAAGACTGGC
CTTGGCCTTTTCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTCCATAACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTTCTCGGCGCCGCCTCCAG
CTGCATTTTCCTCACTCTCTCTCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTTCACATCCTCACCATCGCCGCGGCCGTCTCCGGTTGTGCCATGG
CCGCCACCGCTTCGGCTCGATGGTTCGGAGTTCACATGGTGTTCACTGTCCTGACGGCGATATTCCAAGGATCGGTGGCAATGCTGGTGTACACAAGAACAGGGGATTTT
CTGTTGGAACTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAGTGGGTTGTTCTTACTTT
GGCTTTCTTTTTGAAGTACTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTGGGTATGAGAAGTGCTAAAGTTCAGCAGGATGAGGATTTGAAAGACTGGC
CTTGGCCTTTTCAAGTTTGA
Protein sequenceShow/hide protein sequence
MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAATASARWFGVHMVFTVLTAIFQGSVAMLVYTRTGDF
LLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVGMRSAKVQQDEDLKDWPWPFQV