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HG10003289 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003289
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:19731002..19731229
RNA-Seq ExpressionHG10003289
SyntenyHG10003289
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015596.1 hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2684Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGKVCMLCTCLILVVVA+G LFGFGVFKDGFHKIKDK DFCDG +CG GGGGGG      GRPFFAAPPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
KAG7028302.1 hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2274.67Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGKVCM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG LC            GRGRPFFAAPP RF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
XP_008449006.1 PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]3.5e-2480Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGK+CMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDG LCGG            GRPFF APPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
XP_022932418.1 uncharacterized protein LOC111438773 [Cucurbita moschata]2.4e-2581.33Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGKVCMLCTCLILVVVA+G LFGFGVFKDGFHKIKDK DFCDG +CG GGGG        GRPFFAAPPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]1.1e-2890.67Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVD+CDG LCGGGGGGGGG     GRPFFAAPPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein5.6e-2076.71Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPP
        MCC GKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDG  CGGGG G           F  APPP
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPP
A0A1S3BL26 uncharacterized protein LOC1034910081.7e-2480Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGK+CMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDG LCGG            GRPFF APPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
A0A444YFM3 Uncharacterized protein3.1e-1868.83Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPF--FAAPPPRF
        MCC  ++CMLCTCL+LVV+AIG LFGFGVFK GFHK+KD V +CD   CGGGGGG    GGGRGRPF  + APPP F
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPF--FAAPPPRF
A0A6J1EWB7 uncharacterized protein LOC1114387731.2e-2581.33Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
        MCCFGKVCMLCTCLILVVVA+G LFGFGVFKDGFHKIKDK DFCDG +CG GGGG        GRPFFAAPPPRF
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF
A0A6N2KY51 Uncharacterized protein2.6e-1768.35Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCD----GSLCGGGGGGGGGRGGGRGRPF--FAAPPP
        MCC G++CMLCTCLILVV+ IGL FGFGVFK+GFHK+KD +D CD    GSLCGGGGGG    GG   RPF  F APPP
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCD----GSLCGGGGGGGGGRGGGRGRPF--FAAPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein5.6e-1262.69Show/hide
Query:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDF-CDGSLCGGGGGGGGGRGGGRGRP
        MCC G++CMLCTCL+LVV+AIG LFGFGVFKDGFHKI + +   CD     G GGG G RG G   P
Subjt:  MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDF-CDGSLCGGGGGGGGGRGGGRGRP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGCTTTGGAAAGGTCTGCATGCTGTGCACGTGCCTGATTCTGGTGGTTGTGGCCATCGGATTGCTCTTTGGATTCGGAGTTTTCAAAGACGGATTTCAT
AAGATTAAAGATAAGGTCGATTTTTGCGATGGAAGTCTCTGCGGCGGTGGCGGTGGCGGTGGCGGTGGCCGTGGCGGTGGCCGTGGAAGGCCTTTCTTCGCGGCG
CCTCCTCCTCGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTGCTTTGGAAAGGTCTGCATGCTGTGCACGTGCCTGATTCTGGTGGTTGTGGCCATCGGATTGCTCTTTGGATTCGGAGTTTTCAAAGACGGATTTCAT
AAGATTAAAGATAAGGTCGATTTTTGCGATGGAAGTCTCTGCGGCGGTGGCGGTGGCGGTGGCGGTGGCCGTGGCGGTGGCCGTGGAAGGCCTTTCTTCGCGGCG
CCTCCTCCTCGGTTCTAG
Protein sequenceShow/hide protein sequence
MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGSLCGGGGGGGGGRGGGRGRPFFAAPPPRF