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HG10003315 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003315
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:20145028..20145291
RNA-Seq ExpressionHG10003315
SyntenyHG10003315
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]3.6e-0434.15Show/hide
Query:  CWKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNLPMEVESNPVKVIKL
        CWK+N D +WS+  + GGI +I+ D     +  G   I     I  LE   I  GL+ I +   +   P+ +ES+ V+VI+L
Subjt:  CWKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNLPMEVESNPVKVIKL
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.6e-0431.03Show/hide
Query:  WKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNL----PMEVESNPVKVIKLFN
        W +N D +WS S   GGI +II  W+   +  G   +    ++K+LEA  I +GL+++       NL    P+ +E++  +V  L N
Subjt:  WKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNL----PMEVESNPVKVIKLFN
TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132161.7e-0434.15Show/hide
Query:  CWKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNLPMEVESNPVKVIKL
        CWK+N D +WS+  + GGI +I+ D     +  G   I     I  LE   I  GL+ I +   +   P+ +ES+ V+VI+L
Subjt:  CWKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNLPMEVESNPVKVIKL
A0A6J1DNV9 uncharacterized protein LOC1110224031.7e-0431.03Show/hide
Query:  WKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNL----PMEVESNPVKVIKLFN
        W +N D +WS S   GGI +II  W+   +  G   +    ++K+LEA  I +GL+++       NL    P+ +E++  +V  L N
Subjt:  WKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNL----PMEVESNPVKVIKLFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGGTTGCTGGAAGATGAATGTCGATGTCACATGGTCGAAGAGCGCTCAGTGCGGTGGGATTGATTACATTATTCATGATTGGAATGACGGGCCTATTGAGGGTGGATG
CATCCTAATATCTACCAATTGGTCAATCAAAGTCTTAGAAGCTAAAGTCATTTTTGATGGCTTAAAACACATATGCATTTATTGGGATGAGCAAAATCTCCCGATGGAGG
TGGAATCAAATCCAGTCAAAGTCATCAAACTTTTTAATCTTTAA
mRNA sequenceShow/hide mRNA sequence
GAGGGTTGCTGGAAGATGAATGTCGATGTCACATGGTCGAAGAGCGCTCAGTGCGGTGGGATTGATTACATTATTCATGATTGGAATGACGGGCCTATTGAGGGTGGATG
CATCCTAATATCTACCAATTGGTCAATCAAAGTCTTAGAAGCTAAAGTCATTTTTGATGGCTTAAAACACATATGCATTTATTGGGATGAGCAAAATCTCCCGATGGAGG
TGGAATCAAATCCAGTCAAAGTCATCAAACTTTTTAATCTTTAA
Protein sequenceShow/hide protein sequence
EGCWKMNVDVTWSKSAQCGGIDYIIHDWNDGPIEGGCILISTNWSIKVLEAKVIFDGLKHICIYWDEQNLPMEVESNPVKVIKLFNL