CuGenDBv2

Gene ID	HG10003324
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	YrdC-like domain-containing protein
Genome location	Chr11:20227996..20231237
RNA-Seq Expression	HG10003324
Synteny	HG10003324
Gene Ontology terms	GO:0003725 - double-stranded RNA binding (molecular function)
InterPro domains	IPR006070 - YrdC-like domain IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK05316.1 yrdC domain-containing protein [Cucumis melo var. makuwa]

1.2e-141

76.42

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD

Query:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD
        GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Subjt:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD

Query:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

XP_004145661.1 uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus]

9.1e-145

85.71

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

XP_008450106.1 PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo]

5.2e-148

87.34

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

XP_023527501.1 uncharacterized protein LOC111790710 [Cucurbita pepo subsp. pepo]

7.5e-139

85.38

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI NVKS+VY SAASSLSSVRSFA IRFPS P  +RFDGS TSRRLQVLAM VKRSPKRLKYSAPRFTKEGSLLYVKAESGED WKLEPIV+LLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+A
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGA+LPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  P
        P
Subjt:  P

XP_038877956.1 uncharacterized protein YciO [Benincasa hispida]

2.3e-148

88.67

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MIVNVKS+VY S ASS SSVRS+A IRFP  PSAIRF GSETSRRLQVLA VVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMDAPLISTSVK  KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIRI
        PTVGEDIRI
Subjt:  PTVGEDIRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBV9 YrdC-like domain-containing protein

4.4e-145

85.71

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

A0A1S3BMX4 uncharacterized protein YciO isoform X1

2.5e-148

87.34

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVG
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVG

Query:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
        VIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA
Subjt:  VIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE
        SRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Subjt:  SRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE

Query:  PTVGEDIR
        P +GEDIR
Subjt:  PTVGEDIR

A0A5A7TLP4 YrdC domain-containing protein

1.7e-136

74.02

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Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------IKN---IEPSK---------------PLSILCHSFRDIDKYTT
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTV      +KN   IE  +               PLSILCHSFRDIDKYTT
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------IKN---IEPSK---------------PLSILCHSFRDIDKYTT

Query:  GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIY
        GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIY
Subjt:  GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIY

Query:  GQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        GQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  GQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

A0A5D3C4N1 YrdC domain-containing protein

6.0e-142

76.42

Show/hide

Query:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------
        MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRLKYSAPRFTK                               
Subjt:  MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
                     EGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD
Subjt:  -------------EGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGD

Query:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD
        GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Subjt:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD

Query:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR
        FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Subjt:  FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR

A0A6J1J9P6 uncharacterized protein LOC111482522

4.7e-139

85.76

Show/hide

Query:  MIVNVKSNVYSSAA-SSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAV
        MIVNVKS+ Y SAA SSLSSVRSFA IRFPSPP A+RFDGS TSRRLQVLAM VKRSPKRLKYSAPRFTK+GSLLYVKAESGED WKLEPIV+LLKEGAV
Subjt:  MIVNVKSNVYSSAA-SSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAV

Query:  GVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKY
        GVIPTDTV                  IKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+
Subjt:  GVIPTDTV------------------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKY

Query:  ASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDG
        ASRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGARLPWMVAE D 
Subjt:  ASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDG

Query:  EP
        EP
Subjt:  EP

SwissProt top hits

e value

%identity

Alignment

P0AFR4 Uncharacterized protein YciO

9.8e-17

Show/hide

Query:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG
        V ++++G V V PTD+       IE    +  +C        H+F    RD+ + +T +   D       FR++K+  PG YTFIL  +KE+P+  ++  
Subjt:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG

Query:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM
                RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   P++
Subjt:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM

P0AFR5 Uncharacterized protein YciO

9.8e-17

Show/hide

Query:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG
        V ++++G V V PTD+       IE    +  +C        H+F    RD+ + +T +   D       FR++K+  PG YTFIL  +KE+P+  ++  
Subjt:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG

Query:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM
                RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   P++
Subjt:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM

P0AFR6 Uncharacterized protein YciO

9.8e-17

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Query:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG
        V ++++G V V PTD+       IE    +  +C        H+F    RD+ + +T +   D       FR++K+  PG YTFIL  +KE+P+  ++  
Subjt:  VNLLKEGAVGVIPTDTVIK---NIEPSKPLSILC--------HSF----RDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYG

Query:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM
                RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T     ++R+G G   P++
Subjt:  TTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWM

P45103 Uncharacterized protein HI_1198

4.0e-18

28.43

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Query:  VNLLKEGAVGVIPTDT------------------VIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
        V +L++G V V PTD+                   I+ +      +++C    ++  Y         + ++  +R++K+  PG YTFILTA+KELP+  +
Subjt:  VNLLKEGAVGVIPTDT------------------VIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGAR
                 + RK +G+R+PD+ I   +L  +  P++S S+  P +E+    DP  I D   +  +D ++ GG    +P+TVVD+T     ILR+G G+ 
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGAR

Query:  LPWM
         P++
Subjt:  LPWM

Arabidopsis top hits

e value

%identity

Alignment

AT3G01920.1 DHBP synthase RibB-like alpha/beta domain

2.5e-100

62.63

Show/hide

Query:  LIRFPSP-----PSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAE-SGEDGWKLEPIVNLLKEGAVGVIPTDTV-----------
        L+  PSP     PS +    S + RR  ++A+  KRSPKRLKYS PRFTKEG L+Y++ +  G D WKL+P+++LLK+GAVGVIPTDTV           
Subjt:  LIRFPSP-----PSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAE-SGEDGWKLEPIVNLLKEGAVGVIPTDTV-----------

Query:  -------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAI
               IK IE SKPLSILC S RDID +T GFPRGDG GH+N+FR VK CLPGPYTFILTASKELPK C+ YGTT+ KYASRKNVGVRI DD +CQAI
Subjt:  -------IKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAI

Query:  LEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDI
        L++MDAPLI TSVK PKENEW++DP  I DIYG EGLDFVVDGG+RVA+PST+VDMT    K++R+GKG  LPWMV EDD E ++ +D+
Subjt:  LEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDI

Sequences

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CDS sequence

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ATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCTTCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTT
CGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGAAGGGAGCTTGC
TATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGATCAAGAAT
ATAGAGCCTTCAAAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCG
CATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAA
GGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAAAAGATGGATGCCCCATTAATATCCACAAGTGTCAAATGCCCGAAGGAAAATGAG
TGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGAC
CATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGA

mRNA sequence

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Protein sequence

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MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVIKN
IEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENE
WLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIRI

HG10003324 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome