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HG10003328 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003328
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationChr11:20245431..20245731
RNA-Seq ExpressionHG10003328
SyntenyHG10003328
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145664.1 protein transport protein Sec61 subunit gamma [Cucumis sativus]8.2e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

XP_007215225.2 uncharacterized protein LOC18784392 [Prunus persica]1.8e-2795.65Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

XP_008231108.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume]1.8e-2795.65Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

XP_012489479.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii]1.8e-2795.65Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

XP_028063760.1 protein transport protein Sec61 subunit gamma [Camellia sinensis]1.4e-2795.65Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDA+DS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A0D2TL23 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

A0A1U8ISF2 protein transport protein Sec61 subunit gamma4.0e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

A0A5D2CZA3 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

A0A5D2VBP1 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

A0A6J1J2N1 protein transport protein Sec61 subunit gamma-like4.0e-2897.1Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-12.2e-2891.18Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-22.2e-2891.18Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma2.6e-2992.75Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG
        MDA+DS  DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVV GFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma5.9e-2172.06Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF + GF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-31.1e-2789.71Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        M+AIDSA DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein7.9e-2989.71Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        M+AIDSA DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein1.6e-2991.18Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein1.6e-2991.18Show/hide
Query:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS
        MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCATTGATTCCGCTTTCGATCCACTCCGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGC
GGTTCGTACAGCGATTGGCTTCGTCGTTAGGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCATTGATTCCGCTTTCGATCCACTCCGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGC
GGTTCGTACAGCGATTGGCTTCGTCGTTAGGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG
Protein sequenceShow/hide protein sequence
MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG