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HG10003329 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003329
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:20247229..20247564
RNA-Seq ExpressionHG10003329
SyntenyHG10003329
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042928.1 hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa]3.6e-4184.55Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLAR
        MEAN RKLRGFM+GKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+ SQHNIAL+V DNP RDTTATR SLSQ DH YGIVADEGVD+KAANYISSTLAR
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLAR

Query:  FKGSNELGPH
        FK  NEL PH
Subjt:  FKGSNELGPH

KAE8650773.1 hypothetical protein Csa_017653 [Cucumis sativus]5.4e-2969.44Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFK
        MEAN RKLRGFMRGKL PFYKQYNGSKTKQTGL                      D+PGRDTTATRDSLSQ D  YGI+ADEGVD+KAANYISSTLARFK
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFK

Query:  GSNELGPH
          NEL PH
Subjt:  GSNELGPH

KAG6588895.1 hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3177.78Show/hide
Query:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNELGP
        PFYKQY G+KTK TGLVGYVFHRDY +IS HN+AL+VH+NPG DT  TRDSL+Q D+LYGIVADEG+D+KAANYISSTLARFK  NEL P
Subjt:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNELGP

KAG7022660.1 hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2176.47Show/hide
Query:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVD
        PFYKQY G+KTK TGLVGYVFHRDY +IS HN+AL+VH+NPG DT  TRDSL+Q D LYGIVADEG+D
Subjt:  PFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVD

XP_041006743.1 uncharacterized protein LOC121251537 [Juglans microcarpa x Juglans regia]1.1e-1044.44Show/hide
Query:  MEANSRKLRGFMRGKLKPFYK--------QYNGSKTK------QTGLVGYVFHRDYSSISQHNIA---LVVHDNPGRDTTATRDSLSQVDHLYGIVADEG
        MEAN RKLRGF++GKL PF++        QY  SK K       T  +G+V H+DY+    +  A   +V  D+  RD       LS+ D+LYG+ ADE 
Subjt:  MEANSRKLRGFMRGKLKPFYK--------QYNGSKTK------QTGLVGYVFHRDYSSISQHNIA---LVVHDNPGRDTTATRDSLSQVDHLYGIVADEG

Query:  VDLKAANYISSTLARFK
        VD+KAA YISS   RFK
Subjt:  VDLKAANYISSTLARFK

TrEMBL top hitse value%identityAlignment
A0A067LN74 Uncharacterized protein6.0e-1042.11Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDY-SSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDL
        ME+N RK RGFM+GKL PFY+    + T Q                VG+V H+DY  +  +  ++ +V   P  D+   +  LSQ D LYG+  DEGVD+
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDY-SSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDL

Query:  KAANYISSTLARFK
        KAA YISS   RFK
Subjt:  KAANYISSTLARFK

A0A0A0LVE7 Uncharacterized protein9.2e-4384.4Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARF
        MEAN RKLRGFMRGKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+SQHNI L+V D+PGRDTTATRDSLSQ D  YGI+ADEGVD+KAANYISSTLARF
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARF

Query:  KGSNELGPH
        K  NEL PH
Subjt:  KGSNELGPH

A0A5D3C0J6 Uncharacterized protein1.7e-4184.55Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLAR
        MEAN RKLRGFM+GKL PFYKQYNGSKTKQTGLVGYVFHR+ YSS+ SQHNIAL+V DNP RDTTATR SLSQ DH YGIVADEGVD+KAANYISSTLAR
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSSI-SQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLAR

Query:  FKGSNELGPH
        FK  NEL PH
Subjt:  FKGSNELGPH

A0A6A6LUB7 Uncharacterized protein1.2e-1040.68Show/hide
Query:  MEANSRKLRGFMRGKLKPFYK---------QYNGSK-------TKQTGLVGYVFHRDY--SSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADE
        ME+N RK RGFM+GKL PFY+         QY  SK       +  T  VG+  H+DY  +   Q+ ++ ++   P     + RD L+Q D +YG+  DE
Subjt:  MEANSRKLRGFMRGKLKPFYK---------QYNGSK-------TKQTGLVGYVFHRDY--SSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADE

Query:  GVDLKAANYISSTLARFK
         VD+KAA+YISS   RFK
Subjt:  GVDLKAANYISSTLARFK

A0A7N2QZM2 Uncharacterized protein1.6e-1040Show/hide
Query:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDYSSISQ--HNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVD
        MEAN  K RGF++GKL PFY+    S T Q             T  V ++ H+DY   +Q    +A +V DN       +RD +S  D+LYG+  DE VD
Subjt:  MEANSRKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDYSSISQ--HNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVD

Query:  LKAANYISSTLARFK
        +K+A+YISS   RF+
Subjt:  LKAANYISSTLARFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAAACAGTAGAAAACTAAGAGGCTTCATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAGACAAAGCAAACTGGTTTGGTTGGCTATGT
CTTCCATAGGGACTATAGTAGTATTTCTCAACACAACATTGCTTTAGTCGTGCACGATAACCCCGGTCGAGACACGACTGCGACTCGTGACTCGTTAAGTCAGGTTGATC
ATTTGTATGGAATCGTAGCTGATGAAGGTGTCGATTTAAAGGCTGCAAATTATATTTCCTCCACTCTAGCACGGTTCAAAGGCTCGAACGAGTTAGGGCCGCATCGAGAG
ATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAAACAGTAGAAAACTAAGAGGCTTCATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAGACAAAGCAAACTGGTTTGGTTGGCTATGT
CTTCCATAGGGACTATAGTAGTATTTCTCAACACAACATTGCTTTAGTCGTGCACGATAACCCCGGTCGAGACACGACTGCGACTCGTGACTCGTTAAGTCAGGTTGATC
ATTTGTATGGAATCGTAGCTGATGAAGGTGTCGATTTAAAGGCTGCAAATTATATTTCCTCCACTCTAGCACGGTTCAAAGGCTCGAACGAGTTAGGGCCGCATCGAGAG
ATTTAA
Protein sequenceShow/hide protein sequence
MEANSRKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRDYSSISQHNIALVVHDNPGRDTTATRDSLSQVDHLYGIVADEGVDLKAANYISSTLARFKGSNELGPHRE
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