CuGenDBv2

Gene ID	HG10003368
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA-binding storekeeper protein-relatedtranscriptional regulator
Genome location	Chr08:170713..171354
RNA-Seq Expression	HG10003368
Synteny	HG10003368
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domains	IPR007592 - GLABROUS1 enhancer-binding protein family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585873.1 putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-41

50.46

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD EYKI  E ESSEE  E  +S   ++++R K    G VLEWEE+DEI +L+QLY+F  G     YSKAFYE+VK  L N +V+M ++  KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         FDAKL  L+    S  N
Subjt:  NFDAKLRGLIMYAKSDSN

XP_022158994.1 probable transcription factor At4g00610 [Momordica charantia]

2.4e-30

42.29

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Query:  SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQ
        SD EY++E E ES SE+     R +RR+ + + K+  +    +W E+DE+ +LKQLYEFS  +    YS+ FYE+VK  L   +V+M +MR KI G + +
Subjt:  SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQ

Query:  YLEWRRKGNNNNNNHELKLSG----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYI
        YLE       N+  + LK  G     HQR+VL  SKRIWG  +          GG + +E    GF E L EMEI+++CL PS LE+L K+WE+Q LM++
Subjt:  YLEWRRKGNNNNNNHELKLSG----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYI

Query:  QLLSIKSNFDAKLRGL-IMYAKSDSNT
        QLLS K   DAKL  L I +  + +NT
Subjt:  QLLSIKSNFDAKLRGL-IMYAKSDSNT

XP_022951915.1 probable transcription factor At1g66420 [Cucurbita moschata]

2.4e-41

50.46

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD EYKI  E ESSEE  E  +S   ++++R KR     VLEWEE+DEI +L+QLY+F  G     YSKAFYE+VK  L N +V+M ++  KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         FDAKL  L+    S  N
Subjt:  NFDAKLRGLIMYAKSDSN

XP_022973281.1 probable transcription factor At1g61730 [Cucurbita maxima]

1.2e-40

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD +YKI  E ESSEE  E  +S   + ++R KR     VLEW+E+DEI +L+QLYEF  G     YSKAFYE+VK  L N +V+M +   KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LSKRIWG        GGMK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         F+ KL  L+    S +N
Subjt:  NFDAKLRGLIMYAKSDSN

XP_023521141.1 probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]

1.4e-41

50.46

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD EYKI  E ESSEE  E  +    ++++R KR     VLEWEE+DEI +L+QLY+F  G     YSKAFYE+VK  L N +V+M++M  KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         FDAKL  L+    S +N
Subjt:  NFDAKLRGLIMYAKSDSN

TrEMBL top hits

e value

%identity

Alignment

A0A6D2LHW5 Uncharacterized protein

4.5e-06

39.58

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Query:  WEEDDEITLLKQL--YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWGD
        W EDDEIT+L+    YE  AG+   + S AFYE VK S+ + +V  +++  K+ G K ++   R KG    +  + K + PH R+   LSK IWGD
Subjt:  WEEDDEITLLKQL--YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWGD

A0A6J1DXL5 probable transcription factor At4g01260

5.9e-06

28.22

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Query:  SGSDKSD-GEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIG
        +GS+  D G  K+       E+  E C S   N++   K+S   G   W   DE  +LK  YEF+  +  G YSK FY +VK  L + +V+ S++  K+ 
Subjt:  SGSDKSD-GEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIG

Query:  GFKNQYLEWRRKGNNNNNNHELKLSGPHQRQVLV-LSKRIWGDYDGGMKHLEG----------------FREFLGEMEIDINCLMPSSLEYLKKEWEVQM
          + ++L+   KG        +K S  +Q + L  +S  IWG          G                F   +  +++DI+C+ P+ L  ++K+WE QM
Subjt:  GFKNQYLEWRRKGNNNNNNHELKLSGPHQRQVLV-LSKRIWGDYDGGMKHLEG----------------FREFLGEMEIDINCLMPSSLEYLKKEWEVQM

Query:  LM
         M
Subjt:  LM

A0A6J1E125 probable transcription factor At4g00610

1.2e-30

42.29

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Query:  SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQ
        SD EY++E E ES SE+     R +RR+ + + K+  +    +W E+DE+ +LKQLYEFS  +    YS+ FYE+VK  L   +V+M +MR KI G + +
Subjt:  SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQ

Query:  YLEWRRKGNNNNNNHELKLSG----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYI
        YLE       N+  + LK  G     HQR+VL  SKRIWG  +          GG + +E    GF E L EMEI+++CL PS LE+L K+WE+Q LM++
Subjt:  YLEWRRKGNNNNNNHELKLSG----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYI

Query:  QLLSIKSNFDAKLRGL-IMYAKSDSNT
        QLLS K   DAKL  L I +  + +NT
Subjt:  QLLSIKSNFDAKLRGL-IMYAKSDSNT

A0A6J1GK86 probable transcription factor At1g66420

1.1e-41

50.46

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD EYKI  E ESSEE  E  +S   ++++R KR     VLEWEE+DEI +L+QLY+F  G     YSKAFYE+VK  L N +V+M ++  KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         FDAKL  L+    S  N
Subjt:  NFDAKLRGLIMYAKSDSN

A0A6J1I882 probable transcription factor At1g61730

5.7e-41

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Query:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG
        S  D SD +YKI  E ESSEE  E  +S   + ++R KR     VLEW+E+DEI +L+QLYEF  G     YSKAFYE+VK  L N +V+M +   KI  
Subjt:  SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGG

Query:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS
        FK +YL  E R+K N      +LK S  H+ +V +LSKRIWG        GGMK+ +GF E+L EM+IDI+CL PS LE+ KKEWEVQ+LMYI+LLS KS
Subjt:  FKNQYL--EWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKS

Query:  NFDAKLRGLIMYAKSDSN
         F+ KL  L+    S +N
Subjt:  NFDAKLRGLIMYAKSDSN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCGGGCTCAGACAAATCAGATGGAGAGTACAAAATAGAGTTGGAAGTGGAAAGTAGTGAAGAATATTCAGAATATTGTCGGTCAAAAAGAAGGAATGCGCAAAGAAG
AAAAAAGAGATCATCATCAGGTGGAGTATTGGAATGGGAGGAAGATGATGAAATCACTTTGTTGAAACAACTCTATGAATTCTCAGCTGGTAGCTGCAAGGGTTTGTATT
CAAAGGCATTTTATGAATATGTGAAGCCAAGCTTAAGGAACAAGGAAGTGACGATGAGTGAAATGAGAGGCAAAATTGGTGGATTCAAAAACCAATATTTGGAGTGGAGA
AGGAAAGGCAATAATAATAATAATAATCATGAATTGAAATTGTCAGGGCCTCACCAACGCCAAGTGCTTGTGCTATCGAAGAGAATATGGGGAGATTATGATGGGGGAAT
GAAGCATTTGGAAGGATTTAGGGAGTTTCTTGGAGAGATGGAGATTGATATCAATTGTTTGATGCCTTCATCTTTGGAATATCTTAAGAAAGAGTGGGAAGTTCAAATGC
TTATGTACATTCAGCTTTTGTCAATCAAGTCCAACTTTGATGCTAAGCTTAGGGGATTGATCATGTATGCCAAATCTGATTCAAACACCTAA

mRNA sequence

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Protein sequence

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MSGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWR
RKGNNNNNNHELKLSGPHQRQVLVLSKRIWGDYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSNT

HG10003368 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome