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HG10003369 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003369
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPHD-type domain-containing protein
Genome locationChr08:195273..195659
RNA-Seq ExpressionHG10003369
SyntenyHG10003369
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHN96267.1 uncharacterized protein DS421_18g617000 [Arachis hypogaea]8.7e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

XP_016170176.1 uncharacterized protein LOC107612908 [Arachis ipaensis]8.7e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

XP_022156988.1 uncharacterized protein LOC111023817 [Momordica charantia]7.6e-1940.77Show/hide
Query:  KQKKEGVTDDSEGQNGVKELCVKRRRMDKEEVGDGDGDGDGDGGGGKQEAQAQAQAHEWRHCELCGGGSDGKPLIFMEHNKH------EINDGFGDEDGW
        + K++  +DD E   G  +L  KR+   K    +             Q  + +A+   WRHC LCGG +    L    H+ H        NDGFGDEDGW
Subjt:  KQKKEGVTDDSEGQNGVKELCVKRRRMDKEEVGDGDGDGDGDGGGGKQEAQAQAQAHEWRHCELCGGGSDGKPLIFMEHNKH------EINDGFGDEDGW

Query:  LGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        LG L+GP  D N IPR+W+HYQC+IWSPEV
Subjt:  LGHLVGPINDHNHIPRIWLHYQCVIWSPEV

XP_025614969.1 uncharacterized protein LOC112707442 [Arachis hypogaea]8.7e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

XP_029151151.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112772466 [Arachis hypogaea]8.7e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

TrEMBL top hitse value%identityAlignment
A0A1R3HX30 PHD-type domain-containing protein7.1e-1545.65Show/hide
Query:  AQAQAQAHEWRHCELCGGGSDGKPLIFMEHN-----------------KHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        A A++   + R C LCGGG+DGKP   + H+                  ++I DGFGDE GWLG L+GPIND   I RIW+H  C +WSPEV
Subjt:  AQAQAQAHEWRHCELCGGGSDGKPLIFMEHN-----------------KHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

A0A444Y418 PHD-type domain-containing protein4.2e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

A0A445BZG8 PHD-type domain-containing protein4.2e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

A0A6J1DS84 uncharacterized protein LOC1110238173.7e-1940.77Show/hide
Query:  KQKKEGVTDDSEGQNGVKELCVKRRRMDKEEVGDGDGDGDGDGGGGKQEAQAQAQAHEWRHCELCGGGSDGKPLIFMEHNKH------EINDGFGDEDGW
        + K++  +DD E   G  +L  KR+   K    +             Q  + +A+   WRHC LCGG +    L    H+ H        NDGFGDEDGW
Subjt:  KQKKEGVTDDSEGQNGVKELCVKRRRMDKEEVGDGDGDGDGDGGGGKQEAQAQAQAHEWRHCELCGGGSDGKPLIFMEHNKH------EINDGFGDEDGW

Query:  LGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        LG L+GP  D N IPR+W+HYQC+IWSPEV
Subjt:  LGHLVGPINDHNHIPRIWLHYQCVIWSPEV

A0A6P4BXA8 uncharacterized protein LOC1074626544.2e-1545.83Show/hide
Query:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        KQ +    +  E R C LCGGG+DGKP                      E    +I DGF DE GWLGHL+GPIND+  I RIW+H QC +WSPEV
Subjt:  KQEAQAQAQAHEWRHCELCGGGSDGKP------------------LIFMEHNKHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.1e-1545.78Show/hide
Query:  RHCELCGGGSDGK-PLIFMEHN-----------------KHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV
        R C LCG G+DGK P   M+ N                 K++I DGFGD+ GWLG L+GPIND   I   W+H  C +WSPEV
Subjt:  RHCELCGGGSDGK-PLIFMEHN-----------------KHEINDGFGDEDGWLGHLVGPINDHNHIPRIWLHYQCVIWSPEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAATGGAAGCAAAAAAAGGAAGGGGTAACTGATGATAGTGAGGGGCAGAATGGAGTAAAGGAATTGTGTGTGAAACGAAGAAGAATGGATAAGGAAGAAGTTGG
TGATGGTGATGGTGATGGTGATGGTGATGGTGGTGGAGGAAAGCAAGAGGCTCAGGCTCAGGCTCAGGCTCATGAGTGGAGACATTGTGAACTATGTGGAGGAGGAAGTG
ATGGAAAACCTCTTATTTTTATGGAACATAATAAGCATGAGATTAATGATGGATTTGGTGATGAAGATGGATGGCTTGGTCATCTTGTAGGTCCCATTAATGATCATAAT
CACATTCCTCGAATATGGCTTCATTATCAATGTGTTATTTGGAGTCCCGAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAATGGAAGCAAAAAAAGGAAGGGGTAACTGATGATAGTGAGGGGCAGAATGGAGTAAAGGAATTGTGTGTGAAACGAAGAAGAATGGATAAGGAAGAAGTTGG
TGATGGTGATGGTGATGGTGATGGTGATGGTGGTGGAGGAAAGCAAGAGGCTCAGGCTCAGGCTCAGGCTCATGAGTGGAGACATTGTGAACTATGTGGAGGAGGAAGTG
ATGGAAAACCTCTTATTTTTATGGAACATAATAAGCATGAGATTAATGATGGATTTGGTGATGAAGATGGATGGCTTGGTCATCTTGTAGGTCCCATTAATGATCATAAT
CACATTCCTCGAATATGGCTTCATTATCAATGTGTTATTTGGAGTCCCGAGGTTTAG
Protein sequenceShow/hide protein sequence
MMKWKQKKEGVTDDSEGQNGVKELCVKRRRMDKEEVGDGDGDGDGDGGGGKQEAQAQAQAHEWRHCELCGGGSDGKPLIFMEHNKHEINDGFGDEDGWLGHLVGPINDHN
HIPRIWLHYQCVIWSPEV