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HG10003391 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003391
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposase
Genome locationChr08:562741..563921
RNA-Seq ExpressionHG10003391
SyntenyHG10003391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038258.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]1.1e-1476.47Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQVKHDLQ  RS P W+PVKFNTK AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

KAA0061222.1 transposase [Cucumis melo var. makuwa]2.5e-1474.51Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVKFNTK+AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

TYJ97211.1 uncharacterized protein E5676_scaffold92G00020 [Cucumis melo var. makuwa]2.9e-1048.19Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVK                                FNTK AYSQEEIDE+RTEWA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV

TYK06270.1 transposase [Cucumis melo var. makuwa]2.5e-1474.51Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVKFNTK+AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

TYK21543.1 transposase [Cucumis melo var. makuwa]2.9e-1048.19Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVK                                FNTK AYSQEEIDE+RTEWA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV

TrEMBL top hitse value%identityAlignment
A0A5A7T5X2 Transposon protein, putative, CACTA, En/Spm sub-class5.5e-1576.47Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQVKHDLQ  RS P W+PVKFNTK AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

A0A5A7UZ87 Transposase1.2e-1474.51Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVKFNTK+AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

A0A5D3BF14 ULP_PROTEASE domain-containing protein1.4e-1048.19Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVK                                FNTK AYSQEEIDE+RTEWA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV

A0A5D3C4L5 Transposase1.2e-1474.51Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVKFNTK+AY QEEIDE+RT+WA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQEEIDEVRTEWASFVGRFV

A0A5D3DD98 Transposase1.4e-1048.19Show/hide
Query:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV
        GLK WQ KHDLQ  RS P W+PVK                                FNTK AYSQEEIDE+RTEWA+FV RFV
Subjt:  GLKIWQVKHDLQHRRSNPVWKPVK--------------------------------FNTKTAYSQEEIDEVRTEWASFVGRFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCCCACACTTCAACATATTTTTCTCTCAAATAGGGTTTGTGCTCGTGGTCGCCGCCGCTGTCCAGTCCTTACCGTCGCCGTCGTCGTGGCGTGGAGTAGC
AGTGGCCGTCGCTACCGTCGCCGTCGCTGCCGTTGCTGTTGCAGTAAAAAATCGTGCATTCGTGGAGCGCTGGAGCTGTCTCGTCTCTACCGTTGCTGTCTCGTCTCTGC
CGTGCGCTCCAGGATTGAAAATTTGGCAAGTTAAACATGATCTCCAACACCGTCGCTCTAATCCAGTTTGGAAACCGGTAAAGTTCAATACAAAAACTGCATATAGTCAA
GAAGAGATTGATGAGGTTCGAACAGAATGGGCAAGCTTTGTTGGACGATTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCTCTCCCACACTTCAACATATTTTTCTCTCAAATAGGGTTTGTGCTCGTGGTCGCCGCCGCTGTCCAGTCCTTACCGTCGCCGTCGTCGTGGCGTGGAGTAGC
AGTGGCCGTCGCTACCGTCGCCGTCGCTGCCGTTGCTGTTGCAGTAAAAAATCGTGCATTCGTGGAGCGCTGGAGCTGTCTCGTCTCTACCGTTGCTGTCTCGTCTCTGC
CGTGCGCTCCAGGATTGAAAATTTGGCAAGTTAAACATGATCTCCAACACCGTCGCTCTAATCCAGTTTGGAAACCGGTAAAGTTCAATACAAAAACTGCATATAGTCAA
GAAGAGATTGATGAGGTTCGAACAGAATGGGCAAGCTTTGTTGGACGATTTGTGTAA
Protein sequenceShow/hide protein sequence
MLSLPHFNIFFSQIGFVLVVAAAVQSLPSPSSWRGVAVAVATVAVAAVAVAVKNRAFVERWSCLVSTVAVSSLPCAPGLKIWQVKHDLQHRRSNPVWKPVKFNTKTAYSQ
EEIDEVRTEWASFVGRFV