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HG10003397 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003397
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit E-like
Genome locationChr08:682874..683476
RNA-Seq ExpressionHG10003397
SyntenyHG10003397
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]2.5e-0765.22Show/hide
Query:  VDKFGDVFEKGRTYVIEDGTIKPIDVRYTIVHPKIEISLLKDSEDK
        ++KFGD+ EKG+TY I DG IKPIDVRY  VH KIEISL ++S+ K
Subjt:  VDKFGDVFEKGRTYVIEDGTIKPIDVRYTIVHPKIEISLLKDSEDK
TrEMBL top hitse value%identityAlignment
A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like1.2e-0765.22Show/hide
Query:  VDKFGDVFEKGRTYVIEDGTIKPIDVRYTIVHPKIEISLLKDSEDK
        ++KFGD+ EKG+TY I DG IKPIDVRY  VH KIEISL ++S+ K
Subjt:  VDKFGDVFEKGRTYVIEDGTIKPIDVRYTIVHPKIEISLLKDSEDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGAAAAAAAGAAAAACTAAAATGTTACATATGAATGTTGATAAATTTGGAGATGTATTCGAAAAAGGAAGAACATATGTGATTGAAGATGGCACCATCAAACC
CATTGATGTGAGATATACAATCGTTCACCCAAAAATTGAGATATCATTGTTAAAAGATAGTGAAGACAAAAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGAAAAAAAGAAAAACTAAAATGTTACATATGAATGTTGATAAATTTGGAGATGTATTCGAAAAAGGAAGAACATATGTGATTGAAGATGGCACCATCAAACC
CATTGATGTGAGATATACAATCGTTCACCCAAAAATTGAGATATCATTGTTAAAAGATAGTGAAGACAAAAGAGGTTGA
Protein sequenceShow/hide protein sequence
MSKKKRKTKMLHMNVDKFGDVFEKGRTYVIEDGTIKPIDVRYTIVHPKIEISLLKDSEDKRG