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HG10003398 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003398
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationChr08:686505..686777
RNA-Seq ExpressionHG10003398
SyntenyHG10003398
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]3.1e-2773.33Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

KAA0044862.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.0e-2672.22Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR +LESIGF++WSRAYSPR RY VMTTNISE LN  MLKAR LPI SML+VL MMLQ+WF++RRNEA+ Q  +F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

TYK26962.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]3.1e-2773.33Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

XP_008463110.1 PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]4.5e-2671.91Show/hide
Query:  RQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        R  +SSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  RQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

XP_016903392.1 PREDICTED: uncharacterized protein LOC107992162, partial [Cucumis melo]6.9e-2772.22Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELESIGF++WSRAYSPR +Y VMTTNIS+ LNS MLKAR LPI SMLEVL MMLQ+WF+ RRNE +YQ  +F+++IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

TrEMBL top hitse value%identityAlignment
A0A1S3CIV7 uncharacterized protein LOC1035013362.2e-2671.91Show/hide
Query:  RQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        R  +SSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  RQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

A0A1S4E594 uncharacterized protein LOC1079921623.4e-2772.22Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELESIGF++WSRAYSPR +Y VMTTNIS+ LNS MLKAR LPI SMLEVL MMLQ+WF+ RRNE +YQ  +F+++IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.5e-2773.33Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

A0A5A7TNE6 Protein FAR1-RELATED SEQUENCE 3-like9.8e-2772.22Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR +LESIGF++WSRAYSPR RY VMTTNISE LN  MLKAR LPI SML+VL MMLQ+WF++RRNEA+ Q  +F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

A0A5D3DTY1 Protein FAR1-RELATED SEQUENCE 3-like1.5e-2773.33Show/hide
Query:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE
        MR +ESSAPGIR ELE IGF++WSRAYSPR+RY VMTTNISE LNS MLKA+ LPI SMLEVL MMLQ WF++RRNE +YQ   F+K+IE
Subjt:  MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCAAATGGAATCCAGTGCACCAGGTATACGTGTTGAGTTAGAATCAATTGGATTTTCTCAATGGTCACGTGCTTACTCACCTCGCAAGAGATATATGGTGATGAC
AACAAATATATCTGAGAGGCTGAATTCTACCATGCTTAAAGCTAGGGTTTTACCTATTGCATCTATGCTTGAGGTTTTGATGATGATGTTACAAAAATGGTTTTACGATA
GAAGAAATGAAGCAGAGTATCAGGCTATCGAGTTCAGCAAATCTATTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCAAATGGAATCCAGTGCACCAGGTATACGTGTTGAGTTAGAATCAATTGGATTTTCTCAATGGTCACGTGCTTACTCACCTCGCAAGAGATATATGGTGATGAC
AACAAATATATCTGAGAGGCTGAATTCTACCATGCTTAAAGCTAGGGTTTTACCTATTGCATCTATGCTTGAGGTTTTGATGATGATGTTACAAAAATGGTTTTACGATA
GAAGAAATGAAGCAGAGTATCAGGCTATCGAGTTCAGCAAATCTATTGAGTAA
Protein sequenceShow/hide protein sequence
MRQMESSAPGIRVELESIGFSQWSRAYSPRKRYMVMTTNISERLNSTMLKARVLPIASMLEVLMMMLQKWFYDRRNEAEYQAIEFSKSIE