; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003401 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003401
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFanconi-associated nuclease
Genome locationChr08:725244..725603
RNA-Seq ExpressionHG10003401
SyntenyHG10003401
Gene Ontology termsGO:0007129 - synapsis (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004528 - phosphodiesterase I activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (molecular function)
InterPro domainsIPR011856 - tRNA endonuclease-like domain superfamily
IPR014883 - VRR-NUC domain
IPR033315 - Fanconi-associated nuclease 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607490.1 Fanconi-associated nuclease 1-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-6294.96Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEY GEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

XP_022949023.1 fanconi-associated nuclease 1 homolog [Cucurbita moschata]1.0e-6295.8Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

XP_022998073.1 fanconi-associated nuclease 1 homolog [Cucurbita maxima]1.0e-6295.8Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

XP_023524722.1 fanconi-associated nuclease 1 homolog [Cucurbita pepo subsp. pepo]1.0e-6295.8Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

XP_038889850.1 fanconi-associated nuclease 1 homolog isoform X2 [Benincasa hispida]8.8e-6296.58Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTACNGV+WDRHSL ELRAAVTCIGGPCMASLCRHLAQDY+SWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPK
        MDCGF TEVCKITPMPK
Subjt:  MDCGFRTEVCKITPMPK

TrEMBL top hitse value%identityAlignment
A0A5D3BKT7 Fanconi-associated nuclease3.0e-6095.61Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGT+CNGVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGP+DRLSEQQRAW+LLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITP
        MDCGF TEVCKITP
Subjt:  MDCGFRTEVCKITP

A0A6J1DME5 Fanconi-associated nuclease3.6e-6192.44Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC GVNWD+HSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRF+ EYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        M+CGF+TEVCKITP+PKS+
Subjt:  MDCGFRTEVCKITPMPKSS

A0A6J1DNS1 Fanconi-associated nuclease3.6e-6192.44Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC GVNWD+HSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRF+ EYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        M+CGF+TEVCKITP+PKS+
Subjt:  MDCGFRTEVCKITPMPKSS

A0A6J1GAX8 Fanconi-associated nuclease5.0e-6395.8Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

A0A6J1KFS7 Fanconi-associated nuclease5.0e-6395.8Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
        MGEEILITSWESHKGTAC+GVNWDRHSL ELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLL

Query:  MDCGFRTEVCKITPMPKSS
        MDCGF TE+CKITPMPKS+
Subjt:  MDCGFRTEVCKITPMPKSS

SwissProt top hitse value%identityAlignment
D2HNY3 Fanconi-associated nuclease 13.3e-1941.07Show/hide
Query:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT
        +W++ +G   + V+WDR  SL + +  V+C+GGP ++ +CR LA D+R    G+PDL++W   S +    KLVEVKGP DRLS +Q  WL  L   G   
Subjt:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT

Query:  EVCKITPMPKSS
        EVC +  +   S
Subjt:  EVCKITPMPKSS

Q5SNL7 Fanconi-associated nuclease 1 homolog4.9e-4774.58Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEY-SGEAKLVEVKGPRDRLSEQQRAWLLL
        + EEILI+SWE H+GT+C GVNWDRHSLT+LRAAV C GG  +ASL RHLA DYRSWSSGMPDLLLWRF  E   GEAKLVEVKGPRD+LSEQQRAW+L+
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEY-SGEAKLVEVKGPRDRLSEQQRAWLLL

Query:  LMDCGFRTEVCKITPMPK
        LMD GF  EVCK++P+ K
Subjt:  LMDCGFRTEVCKITPMPK

Q5XVJ4 Fanconi-associated nuclease 1 homolog2.0e-4573.04Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSE-YSGEAKLVEVKGPRDRLSEQQRAWLLL
        M EEILI S+E+ +GTAC GV W+R SL ELRAAV C+GG C+ASLCRHLAQDYRSW SGMPDLL+WRF    Y GEAKLVEVK  +DRLSEQQRAWLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSE-YSGEAKLVEVKGPRDRLSEQQRAWLLL

Query:  LMDCGFRTEVCKITP
        LMD GF  E+CK+ P
Subjt:  LMDCGFRTEVCKITP

Q69ZT1 Fanconi-associated nuclease 13.3e-1941.07Show/hide
Query:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT
        +W++ +G   + V+WDR  SL + +  V+C+GGP ++ +CR LA D+R    G+PDL++W   S +    KLVEVKGP DRLS +Q  WL  L   G   
Subjt:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT

Query:  EVCKITPMPKSS
        EVC +  +   S
Subjt:  EVCKITPMPKSS

Q9Y2M0 Fanconi-associated nuclease 12.3e-2041.96Show/hide
Query:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT
        +W   +G   + V+WDR  SL + +  V+C+GGP ++ +CRHLA D+R    G+PDL++W   S +    KLVEVKGP DRLS +Q  WL  L   G   
Subjt:  SWESHKGTACNGVNWDRH-SLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRT

Query:  EVCKITPMPKSS
        EVC +  +   S
Subjt:  EVCKITPMPKSS

Arabidopsis top hitse value%identityAlignment
AT1G48360.2 zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides1.4e-4673.04Show/hide
Query:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSE-YSGEAKLVEVKGPRDRLSEQQRAWLLL
        M EEILI S+E+ +GTAC GV W+R SL ELRAAV C+GG C+ASLCRHLAQDYRSW SGMPDLL+WRF    Y GEAKLVEVK  +DRLSEQQRAWLLL
Subjt:  MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSE-YSGEAKLVEVKGPRDRLSEQQRAWLLL

Query:  LMDCGFRTEVCKITP
        LMD GF  E+CK+ P
Subjt:  LMDCGFRTEVCKITP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAGATCCTCATAACGTCTTGGGAATCACACAAGGGAACAGCGTGTAATGGAGTTAACTGGGACCGACACTCACTAACCGAGCTTCGGGCAGCTGTCACATG
CATCGGTGGCCCTTGTATGGCTTCATTGTGTCGGCATCTTGCACAAGATTATCGAAGCTGGTCGAGTGGAATGCCAGATTTGTTGTTGTGGCGCTTTAATAGTGAATACA
GTGGTGAAGCTAAACTTGTTGAAGTAAAAGGTCCCAGAGACAGACTCTCTGAACAGCAGCGGGCATGGCTATTACTTCTAATGGATTGTGGCTTCAGAACAGAAGTTTGC
AAAATCACCCCCATGCCAAAATCATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGAGATCCTCATAACGTCTTGGGAATCACACAAGGGAACAGCGTGTAATGGAGTTAACTGGGACCGACACTCACTAACCGAGCTTCGGGCAGCTGTCACATG
CATCGGTGGCCCTTGTATGGCTTCATTGTGTCGGCATCTTGCACAAGATTATCGAAGCTGGTCGAGTGGAATGCCAGATTTGTTGTTGTGGCGCTTTAATAGTGAATACA
GTGGTGAAGCTAAACTTGTTGAAGTAAAAGGTCCCAGAGACAGACTCTCTGAACAGCAGCGGGCATGGCTATTACTTCTAATGGATTGTGGCTTCAGAACAGAAGTTTGC
AAAATCACCCCCATGCCAAAATCATCTTAA
Protein sequenceShow/hide protein sequence
MGEEILITSWESHKGTACNGVNWDRHSLTELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFRTEVC
KITPMPKSS