; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003409 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003409
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAgamous-like MADS-box protein AGL11
Genome locationChr08:888965..890877
RNA-Seq ExpressionHG10003409
SyntenyHG10003409
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO20104.1 mads-box transcription factor [Momordica charantia]1.9e-5097.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

ADN22973.1 mads-box transcription factor [Siraitia grosvenorii]1.9e-5097.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

XP_022149989.1 agamous-like MADS-box protein AGL11 isoform X1 [Momordica charantia]1.9e-5097.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

XP_022149992.1 agamous-like MADS-box protein AGL11 isoform X2 [Momordica charantia]1.9e-5097.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

XP_038889600.1 agamous-like MADS-box protein AGL11 isoform X1 [Benincasa hispida]4.7e-4996.46Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMME-GGTV
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVER+QQANMVSGQELNAIQALASRNFFSPNMME GG V
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMME-GGTV

Query:  TYSHQDKKMLHLG
        T+SHQDKKMLHLG
Subjt:  TYSHQDKKMLHLG

TrEMBL top hitse value%identityAlignment
A0A0A0KW82 K-box domain-containing protein1.1e-4693.86Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALA-SRNFFSPNMME-GGT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVER+QQANMVSGQELNAIQALA SRNFFSPN+ME  G 
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALA-SRNFFSPNMME-GGT

Query:  VTYSHQDKKMLHLG
        V+YSHQDKKMLHLG
Subjt:  VTYSHQDKKMLHLG

A0A6J1D9I0 agamous-like MADS-box protein AGL11 isoform X29.2e-5197.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

A0A6J1DA38 agamous-like MADS-box protein AGL11 isoform X19.2e-5197.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

G9B9E5 Mads-box transcription factor9.2e-5197.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

Q84XW0 Mads-box transcription factor9.2e-5197.32Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGG VT
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        +SHQDKKMLHLG
Subjt:  YSHQDKKMLHLG

SwissProt top hitse value%identityAlignment
A0A217EJJ0 Agamous-like MADS-box protein AGL111.2e-4282.14Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSL++LTVKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+V +RTKIAEVERLQQANMVS  E NAIQAL S NFF PNM+EGG+  
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        Y   DKK+LHLG
Subjt:  YSHQDKKMLHLG

F6I457 Agamous-like MADS-box protein AGL111.8e-4383.04Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT
        MGDSL++LTVKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+V +RTKIAEVERLQQANMVS  E NAIQAL SRNFF PNM+EGG+  
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVT

Query:  YSHQDKKMLHLG
        Y   DKK+LHLG
Subjt:  YSHQDKKMLHLG

Q38836 Agamous-like MADS-box protein AGL114.9e-3365.55Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT
        MGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M  G+
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT

Query:  -----VTYSHQDKKMLHLG
              +YS  DKK+LHLG
Subjt:  -----VTYSHQDKKMLHLG

Q40872 Floral homeotic protein AGAMOUS9.0e-1950.43Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQ-ANMVSGQ---ELNAIQALASRNFFSPNMMEG
        MG+SL +LTV++LK LE +LE+GI+RIRSKK+E+L AEIEY+QK+EI+L N N  +R KIAE ER QQ  N++ G    EL   Q+   RN+   N ++ 
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQ-ANMVSGQ---ELNAIQALASRNFFSPNMMEG

Query:  GTVTYSHQDKKMLHL
            YS QD+  L L
Subjt:  GTVTYSHQDKKMLHL

Q93XH4 Agamous-like MADS-box protein MADS16.9e-1949.12Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERL-QQANMVSGQELNAI--QALASRNFFSPNMMEGG
        +G++LS+L  KELK LE RLE+GI+RIRSKK+E+L AEIEY+QKREIEL+N N+ +R +IAE ER  QQ N++ G +  ++  Q   S+N    N+++  
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERL-QQANMVSGQELNAI--QALASRNFFSPNMMEGG

Query:  TVTYSHQDKKMLHL
           YS  D+  L L
Subjt:  TVTYSHQDKKMLHL

Arabidopsis top hitse value%identityAlignment
AT2G42830.1 K-box region and MADS-box transcription factor family protein4.1e-1946.67Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN---------MVSGQELNAIQALASRNFFSP
        +G+SL +L  KELK LE+RLE+GI+R+RSKKHEML+AEIEY+QKREIEL+N+N+ +R+KI E   LQQ             SG   +      +RN+ + 
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN---------MVSGQELNAIQALASRNFFSP

Query:  NMMEGGTVTYSHQDKKMLHL
        N++E      S+QD+  L L
Subjt:  NMMEGGTVTYSHQDKKMLHL

AT4G09960.1 K-box region and MADS-box transcription factor family protein3.5e-3465.55Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT
        MGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M  G+
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT

Query:  -----VTYSHQDKKMLHLG
              +YS  DKK+LHLG
Subjt:  -----VTYSHQDKKMLHLG

AT4G09960.2 K-box region and MADS-box transcription factor family protein6.0e-2657.14Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT
        MGDSLS+L+VKELKQ+ENRLE+ I+RIRSKK              EIEL+NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M  G+
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT

Query:  -----VTYSHQDKKMLHLG
              +YS  DKK+LHLG
Subjt:  -----VTYSHQDKKMLHLG

AT4G09960.3 K-box region and MADS-box transcription factor family protein3.5e-3465.55Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT
        MGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M  G+
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMMEGGT

Query:  -----VTYSHQDKKMLHLG
              +YS  DKK+LHLG
Subjt:  -----VTYSHQDKKMLHLG

AT4G09960.4 K-box region and MADS-box transcription factor family protein1.9e-3263.41Show/hide
Query:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKR----EIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM
        MGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKR    EIEL+NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M
Subjt:  MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKR----EIELENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM

Query:  EGGT-----VTYSHQDKKMLHLG
          G+      +YS  DKK+LHLG
Subjt:  EGGT-----VTYSHQDKKMLHLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGACTCCTTGAGTGCTCTTACTGTCAAAGAACTGAAGCAGCTTGAAAATAGGCTTGAAAGAGGCATCACTAGAATCAGATCAAAGAAGCATGAAATGTTGCTAGC
AGAAATTGAGTACCTTCAGAAAAGGGAGATTGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGATAGCAGAAGTTGAGAGGCTTCAACAAGCAAACATGGTGTCTG
GACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGCAATTTCTTTTCTCCTAATATGATGGAAGGTGGAACTGTTACTTACTCTCATCAAGACAAGAAGATGCTTCAT
CTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGACTCCTTGAGTGCTCTTACTGTCAAAGAACTGAAGCAGCTTGAAAATAGGCTTGAAAGAGGCATCACTAGAATCAGATCAAAGAAGCATGAAATGTTGCTAGC
AGAAATTGAGTACCTTCAGAAAAGGGAGATTGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGATAGCAGAAGTTGAGAGGCTTCAACAAGCAAACATGGTGTCTG
GACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGCAATTTCTTTTCTCCTAATATGATGGAAGGTGGAACTGTTACTTACTCTCATCAAGACAAGAAGATGCTTCAT
CTTGGGTGA
Protein sequenceShow/hide protein sequence
MGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGTVTYSHQDKKMLH
LG