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HG10003410 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003410
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr08:913324..914179
RNA-Seq ExpressionHG10003410
SyntenyHG10003410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592381.1 hypothetical protein SDJN03_14727, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3380.37Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFL F  SL +HSLSVLA++HSSA++G GKAKK    RS SMGIKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

KGN52701.1 hypothetical protein Csa_009261 [Cucumis sativus]4.9e-4089.72Show/hide
Query:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSGSQSSRSLQFLFF FS +F HSLSVLA ++SSAKDGGK KKD ARRSPSMGIKI+IICLGVVTVI FSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_008459655.1 PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]2.0e-4190.65Show/hide
Query:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSGSQSSRSLQFLFF F+ +F+HSLSVLAND+SSAKDGGK KKD  RRSPSMGIKI+IICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_023525282.1 uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]3.4e-3381.13Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        MS S+SS SLQFL F  SL +HSLSVLA DHSSAKD GK KK  A +SPS GIK++IICLGVVT IAFSVILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]1.8e-4293.4Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        MSGSQSSRSLQFLFF   LF+HSLSVLANDHSSAKDGGK+KKD ARRSPSM IKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein2.4e-4089.72Show/hide
Query:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSGSQSSRSLQFLFF FS +F HSLSVLA ++SSAKDGGK KKD ARRSPSMGIKI+IICLGVVTVI FSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987109.7e-4290.65Show/hide
Query:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSGSQSSRSLQFLFF F+ +F+HSLSVLAND+SSAKDGGK KKD  RRSPSMGIKI+IICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A5A7TC90 Uncharacterized protein9.7e-4290.65Show/hide
Query:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MSGSQSSRSLQFLFF F+ +F+HSLSVLAND+SSAKDGGK KKD  RRSPSMGIKI+IICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFF-FSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326781.7e-3380.37Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFL F  SL +HSLSVLA++HSSA++G GKAKK    RS SMGIKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

A0A6J1ICT0 uncharacterized protein LOC1114726074.8e-3379.44Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFL F  SL +HSLSVLA++HSSA+ G GKAKK    RS SMGIKI++ICLGVVTV+AFSVIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDG-GKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein6.3e-1750Show/hide
Query:  LFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        L FF+S+ +     L+ D  +   G K +   +  S   G K+I++ +G V V  FS  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  LFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.1 unknown protein3.1e-1647.17Show/hide
Query:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        +S S  + S   L   +S+ +H    ++ D +S+  G KA+   +  S   G K+I I LG   V   S  L+K+WQKKKR+EQ+ARLLKLFE+DDELEV
Subjt:  MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

AT1G57765.2 unknown protein1.4e-1651.06Show/hide
Query:  FFFSSLFIHSL-SVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        FF + L++ S+   ++ D +S+  G KA+   +  S   G K+I I LG   V   S  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  FFFSSLFIHSL-SVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT3G53490.1 unknown protein1.2e-0738.67Show/hide
Query:  SSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        S+ + G + ++      P + + I+++ LGVV V    ++ +K W+KKKR+++ AR LKLFED D++E ELGL +
Subjt:  SSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCTTCTCTTCTCTCTTTATCCATTCTCTTTCAGTGTTGGCAAATGACCATTCAAGTGCTAAAGATGG
TGGTAAAGCTAAAAAGGACGTTGCTCGGAGGAGCCCGTCGATGGGGATCAAGATAATAATCATATGTTTAGGAGTTGTGACTGTCATTGCCTTTTCTGTGATTCTATTCA
AGATATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCTTCTTCTCTTCTCTCTTTATCCATTCTCTTTCAGTGTTGGCAAATGACCATTCAAGTGCTAAAGATGG
TGGTAAAGCTAAAAAGGACGTTGCTCGGAGGAGCCCGTCGATGGGGATCAAGATAATAATCATATGTTTAGGAGTTGTGACTGTCATTGCCTTTTCTGTGATTCTATTCA
AGATATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA
Protein sequenceShow/hide protein sequence
MSGSQSSRSLQFLFFFSSLFIHSLSVLANDHSSAKDGGKAKKDVARRSPSMGIKIIIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD