; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003413 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003413
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr08:936882..944351
RNA-Seq ExpressionHG10003413
SyntenyHG10003413
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039243.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]8.0e-13088.55Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+G+CRE+GQ++FTARL+Q+  S S ME     C NAKGQHCLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSMPSQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LPSILRSLKSS+DIGSILSS CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDY PNVIHYNIVLR LGRAQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYG+LIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

XP_004141647.3 pentatricopeptide repeat-containing protein At1g73710 [Cucumis sativus]3.1e-12988.55Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+G+CRELGQ+SFTARL Q+NFSPS M+     C NAKGQ CLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSM SQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LPSILRSLKS+SDIG+ILSS CQNLSPKEQTVILKEQS+WERVIQVFQWFKSQKDYVPNVIHYNIVLR LG+AQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYGMLIDVYGKVGLVKEALLWIKHM VRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

XP_008459651.1 PREDICTED: pentatricopeptide repeat-containing protein At1g73710 [Cucumis melo]8.0e-13088.55Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+G+CRE+GQ++FTARL+Q+  S S ME     C NAKGQHCLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSMPSQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LPSILRSLKSS+DIGSILSS CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDY PNVIHYNIVLR LGRAQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYG+LIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

XP_022149701.1 pentatricopeptide repeat-containing protein At1g73710 [Momordica charantia]4.6e-12583.97Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MML +GSCRELGQ+ FTA L+QS+FS  VME NL NC  AKGQHCLFLY SL SREL+FA+ NSQK ++R PKV  GFKLQC SRTLS PS+ LS NGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LP ILRSL+SSSD+G+ILSSLCQNLSPKEQTVILKEQ QWERV+QVF+WFKSQKDYVPNVIHYNIVLRALGRA+KWDELRLCWNEMA+NGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYGML+DVYGK GLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

XP_038890049.1 pentatricopeptide repeat-containing protein At1g73710 [Benincasa hispida]3.7e-13591.6Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+GSCRELGQ+SFT RL+QSNFSPSVME NLH CGNAKGQHCLFLY SLTSRELSFANLNSQ HVSRD K+ LGFKLQCHS   SMPSQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        ++YGG+LPS+L+SLKSSSDIGSILSSLCQNLSPKEQT+ILKEQSQWERVIQVFQWFKS+KDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

TrEMBL top hitse value%identityAlignment
A0A0A0KUW2 PPR_long domain-containing protein9.3e-11691.63Show/hide
Query:  NCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKE
        +C NAKGQ CLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSM SQRLSTNGKKKSYGG+LPSILRSLKS+SDIG+ILSS CQNLSPKE
Subjt:  NCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKE

Query:  QTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPD
        QTVILKEQS+WERVIQVFQWFKSQKDYVPNVIHYNIVLR LG+AQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHM VRGIFPD
Subjt:  QTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPD

Query:  EVTMNTVVRVLKDAGEFDCADKFYKDW
        EVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  EVTMNTVVRVLKDAGEFDCADKFYKDW

A0A1S3CAP2 pentatricopeptide repeat-containing protein At1g737103.9e-13088.55Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+G+CRE+GQ++FTARL+Q+  S S ME     C NAKGQHCLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSMPSQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LPSILRSLKSS+DIGSILSS CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDY PNVIHYNIVLR LGRAQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYG+LIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

A0A5D3BQP5 Pentatricopeptide repeat-containing protein3.9e-13088.55Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MMLH+G+CRE+GQ++FTARL+Q+  S S ME     C NAKGQHCLFLY SLTSREL+F NLNSQKHV+RD KV LGFKLQCHSRTLSMPSQRLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LPSILRSLKSS+DIGSILSS CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDY PNVIHYNIVLR LGRAQKWDELRLCWNEMAENGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYG+LIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

A0A6J1D965 pentatricopeptide repeat-containing protein At1g737102.2e-12583.97Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MML +GSCRELGQ+ FTA L+QS+FS  VME NL NC  AKGQHCLFLY SL SREL+FA+ NSQK ++R PKV  GFKLQC SRTLS PS+ LS NGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGG+LP ILRSL+SSSD+G+ILSSLCQNLSPKEQTVILKEQ QWERV+QVF+WFKSQKDYVPNVIHYNIVLRALGRA+KWDELRLCWNEMA+NGVVPT
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYGML+DVYGK GLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

A0A6J1FGZ9 pentatricopeptide repeat-containing protein At1g737105.5e-11680.53Show/hide
Query:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK
        MML +GSCRELGQ+SFTA L+Q+NF+             AKG H LFL   L SR LS  NLNSQK + RD KV  GFKLQC S+T+  PS+RLSTNGKK
Subjt:  MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKK

Query:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT
        KSYGGVLPSILRSLKSSSDIGSIL+SLCQNLSPKEQTVILKEQ QWERV+QVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENG++P+
Subjt:  KSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPT

Query:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NNTYGML+DVYGK GLVKEALLWIKHM+VRGIFPDEVTMNTVVRVLKDAGEFD ADKFYKDW
Subjt:  NNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

SwissProt top hitse value%identityAlignment
Q10PZ4 Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic4.9e-1325.59Show/hide
Query:  PKEQTVILKEQSQWER---VIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRV
        P EQ  ++   +   R   V+    WF    +    VI YN+ L+AL + ++W +    W EM   GV P N T+  +I      G+  +A+ W + M  
Subjt:  PKEQTVILKEQSQWER---VIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRV

Query:  RGIFPDEVTMNTVVRVLKDAGEFDCADKFY-----KDWEND--FAENLARIHMVGGRDVGVLNGSTFHDIQ--------LVCSGDLGYLGRSWSKIVSST
         G  PD +T + V+     AG+ + A + Y     + W+ D      + R+H   G   G LN   F +++        +V +  L  +GR+    V  T
Subjt:  RGIFPDEVTMNTVVRVLKDAGEFDCADKFY-----KDWEND--FAENLARIHMVGGRDVGVLNGSTFHDIQ--------LVCSGDLGYLGRSWSKIVSST

Query:  AKNLMGNQESI
            + +QE++
Subjt:  AKNLMGNQESI

Q9C9U0 Pentatricopeptide repeat-containing protein At1g737103.3e-7068.39Show/hide
Query:  LGFKLQCH-----SRTLSMP-SQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHY
        + FKLQ H     S ++S P   + + + +K+ YGGV+PSILRSL SS+DI + L+SLC NLSPKEQTV+LKEQ++WERV++VF++F+S + YVPNVIHY
Subjt:  LGFKLQCH-----SRTLSMP-SQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHY

Query:  NIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NIVLRALGRA KWDELRLCW EMA NGV+PTNNTYGML+DVYGK GLVKEALLWIKHM  R  FPDEVTM TVVRV K++GEFD AD+F+K W
Subjt:  NIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

Q9FLD8 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic2.7e-1126.47Show/hide
Query:  LRSLKSSSDIGSILSSL-CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLID
        +   ++  ++ S+LS+   + LS +    +L  ++ W+R + +  W   +  Y P+V  YN+VLR + RA+++D     ++EM +  + P   TY  LI 
Subjt:  LRSLKSSSDIGSILSSL-CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLID

Query:  VYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRV
         +GK G+   AL W++ M    +  D V  + ++ +
Subjt:  VYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRV

Q9LS88 Pentatricopeptide repeat-containing protein At3g230202.9e-4249.15Show/hide
Query:  KKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVV
        K+ SYGG +P+IL +L S  D+   LS   + LS KE+T+ILKEQ  WER +++F+WFKS+  Y  NVIHYNI+LR LG+A KW  ++  W+EM   G+ 
Subjt:  KKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVV

Query:  PTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDWENDFAENLARIHM
        P N+TYG LIDVY K GL   AL W+  M   G+ PDEVT   V+++ K A EF  A++F+K W  D  EN A  H+
Subjt:  PTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDWENDFAENLARIHM

Q9LYT2 Pentatricopeptide repeat-containing protein At3g590407.1e-1228.69Show/hide
Query:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT
        ++  ++ ++ V +++   + + D  P+V+ Y ++++A GRA++ +E    + EM + GV PT+  Y +L+D +   G+V++A    K MR   IFPD  +
Subjt:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT

Query:  MNTVVRVLKDAGEFDCADKFYK
          T++    +A + + A+KF+K
Subjt:  MNTVVRVLKDAGEFDCADKFYK

Arabidopsis top hitse value%identityAlignment
AT1G73710.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-7168.39Show/hide
Query:  LGFKLQCH-----SRTLSMP-SQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHY
        + FKLQ H     S ++S P   + + + +K+ YGGV+PSILRSL SS+DI + L+SLC NLSPKEQTV+LKEQ++WERV++VF++F+S + YVPNVIHY
Subjt:  LGFKLQCH-----SRTLSMP-SQRLSTNGKKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHY

Query:  NIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW
        NIVLRALGRA KWDELRLCW EMA NGV+PTNNTYGML+DVYGK GLVKEALLWIKHM  R  FPDEVTM TVVRV K++GEFD AD+F+K W
Subjt:  NIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDW

AT3G23020.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.1e-4349.15Show/hide
Query:  KKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVV
        K+ SYGG +P+IL +L S  D+   LS   + LS KE+T+ILKEQ  WER +++F+WFKS+  Y  NVIHYNI+LR LG+A KW  ++  W+EM   G+ 
Subjt:  KKKSYGGVLPSILRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVV

Query:  PTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDWENDFAENLARIHM
        P N+TYG LIDVY K GL   AL W+  M   G+ PDEVT   V+++ K A EF  A++F+K W  D  EN A  H+
Subjt:  PTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDWENDFAENLARIHM

AT3G59040.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.0e-1328.69Show/hide
Query:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT
        ++  ++ ++ V +++   + + D  P+V+ Y ++++A GRA++ +E    + EM + GV PT+  Y +L+D +   G+V++A    K MR   IFPD  +
Subjt:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT

Query:  MNTVVRVLKDAGEFDCADKFYK
          T++    +A + + A+KF+K
Subjt:  MNTVVRVLKDAGEFDCADKFYK

AT3G59040.2 Tetratricopeptide repeat (TPR)-like superfamily protein5.0e-1328.69Show/hide
Query:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT
        ++  ++ ++ V +++   + + D  P+V+ Y ++++A GRA++ +E    + EM + GV PT+  Y +L+D +   G+V++A    K MR   IFPD  +
Subjt:  ILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEALLWIKHMRVRGIFPDEVT

Query:  MNTVVRVLKDAGEFDCADKFYK
          T++    +A + + A+KF+K
Subjt:  MNTVVRVLKDAGEFDCADKFYK

AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-1226.47Show/hide
Query:  LRSLKSSSDIGSILSSL-CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLID
        +   ++  ++ S+LS+   + LS +    +L  ++ W+R + +  W   +  Y P+V  YN+VLR + RA+++D     ++EM +  + P   TY  LI 
Subjt:  LRSLKSSSDIGSILSSL-CQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLID

Query:  VYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRV
         +GK G+   AL W++ M    +  D V  + ++ +
Subjt:  VYGKVGLVKEALLWIKHMRVRGIFPDEVTMNTVVRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTTCACATTGGCAGTTGTAGAGAATTAGGGCAAGAAAGTTTCACTGCTCGCTTAGTTCAAAGCAACTTCTCTCCTTCAGTTATGGAAACCAATCTCCATAACTG
TGGCAATGCGAAAGGACAACATTGCCTTTTCCTTTACAATTCATTGACTAGCCGAGAGCTCAGTTTTGCAAATTTGAATTCTCAAAAGCATGTTAGTAGAGACCCAAAGG
TTTTGTTAGGGTTTAAGCTTCAGTGTCATTCAAGAACGTTGTCTATGCCCTCCCAAAGATTATCGACTAATGGGAAGAAGAAGAGCTACGGTGGCGTATTGCCCTCAATC
TTACGCTCTTTGAAGTCCTCTAGTGATATTGGGAGTATCCTAAGTTCCTTGTGCCAAAATCTGAGTCCGAAAGAGCAAACCGTGATACTTAAGGAACAGAGTCAGTGGGA
AAGGGTCATTCAAGTATTCCAGTGGTTCAAGTCTCAGAAAGATTACGTACCCAATGTAATTCACTATAACATCGTGCTTCGCGCTCTGGGACGAGCTCAAAAATGGGATG
AGTTGAGGCTTTGTTGGAATGAAATGGCTGAAAATGGTGTTGTTCCGACTAATAATACTTATGGAATGCTCATTGATGTCTATGGCAAGGTGGGTCTAGTAAAAGAGGCA
CTTCTCTGGATTAAGCATATGAGAGTAAGGGGCATTTTTCCAGACGAGGTAACCATGAACACTGTAGTTCGGGTCTTAAAAGATGCTGGAGAATTTGATTGTGCTGATAA
ATTCTACAAGGATTGGGAAAACGACTTTGCTGAAAATTTGGCCCGCATACATATGGTTGGAGGAAGAGATGTTGGGGTTCTAAATGGTTCAACTTTTCATGATATTCAAC
TCGTATGTAGTGGTGATTTGGGCTACTTGGGAAGATCCTGGAGTAAAATCGTTAGCTCTACGGCAAAAAATTTAATGGGTAATCAAGAATCAATCAAGAAAAACCCAAAA
TTCAAGCAAAATAACAAAAAAAAATCCATACCCATTGCAGAATTGACACAATGGAGGCTAGGGGACGCATCATGGCCAGGGTTGGCAAAACTTTTTGTGGATACCCCCGA
TTGGGGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTTCACATTGGCAGTTGTAGAGAATTAGGGCAAGAAAGTTTCACTGCTCGCTTAGTTCAAAGCAACTTCTCTCCTTCAGTTATGGAAACCAATCTCCATAACTG
TGGCAATGCGAAAGGACAACATTGCCTTTTCCTTTACAATTCATTGACTAGCCGAGAGCTCAGTTTTGCAAATTTGAATTCTCAAAAGCATGTTAGTAGAGACCCAAAGG
TTTTGTTAGGGTTTAAGCTTCAGTGTCATTCAAGAACGTTGTCTATGCCCTCCCAAAGATTATCGACTAATGGGAAGAAGAAGAGCTACGGTGGCGTATTGCCCTCAATC
TTACGCTCTTTGAAGTCCTCTAGTGATATTGGGAGTATCCTAAGTTCCTTGTGCCAAAATCTGAGTCCGAAAGAGCAAACCGTGATACTTAAGGAACAGAGTCAGTGGGA
AAGGGTCATTCAAGTATTCCAGTGGTTCAAGTCTCAGAAAGATTACGTACCCAATGTAATTCACTATAACATCGTGCTTCGCGCTCTGGGACGAGCTCAAAAATGGGATG
AGTTGAGGCTTTGTTGGAATGAAATGGCTGAAAATGGTGTTGTTCCGACTAATAATACTTATGGAATGCTCATTGATGTCTATGGCAAGGTGGGTCTAGTAAAAGAGGCA
CTTCTCTGGATTAAGCATATGAGAGTAAGGGGCATTTTTCCAGACGAGGTAACCATGAACACTGTAGTTCGGGTCTTAAAAGATGCTGGAGAATTTGATTGTGCTGATAA
ATTCTACAAGGATTGGGAAAACGACTTTGCTGAAAATTTGGCCCGCATACATATGGTTGGAGGAAGAGATGTTGGGGTTCTAAATGGTTCAACTTTTCATGATATTCAAC
TCGTATGTAGTGGTGATTTGGGCTACTTGGGAAGATCCTGGAGTAAAATCGTTAGCTCTACGGCAAAAAATTTAATGGGTAATCAAGAATCAATCAAGAAAAACCCAAAA
TTCAAGCAAAATAACAAAAAAAAATCCATACCCATTGCAGAATTGACACAATGGAGGCTAGGGGACGCATCATGGCCAGGGTTGGCAAAACTTTTTGTGGATACCCCCGA
TTGGGGAATCTGA
Protein sequenceShow/hide protein sequence
MMLHIGSCRELGQESFTARLVQSNFSPSVMETNLHNCGNAKGQHCLFLYNSLTSRELSFANLNSQKHVSRDPKVLLGFKLQCHSRTLSMPSQRLSTNGKKKSYGGVLPSI
LRSLKSSSDIGSILSSLCQNLSPKEQTVILKEQSQWERVIQVFQWFKSQKDYVPNVIHYNIVLRALGRAQKWDELRLCWNEMAENGVVPTNNTYGMLIDVYGKVGLVKEA
LLWIKHMRVRGIFPDEVTMNTVVRVLKDAGEFDCADKFYKDWENDFAENLARIHMVGGRDVGVLNGSTFHDIQLVCSGDLGYLGRSWSKIVSSTAKNLMGNQESIKKNPK
FKQNNKKKSIPIAELTQWRLGDASWPGLAKLFVDTPDWGI