; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003430 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003430
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCoat Protein
Genome locationChr08:1234073..1235044
RNA-Seq ExpressionHG10003430
SyntenyHG10003430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039255.1 putative coat protein [Cucumis melo var. makuwa]5.3e-4348.35Show/hide
Query:  DESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAY
        DES E F ES T++LP GNHAY LELR+ G LGNFFPR SST+  IELHPQRLM G                           F  +A            
Subjt:  DESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAY

Query:  VKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMGLRETTLSTYMQLNMQE-----------
                      +W    +KMP ITSDLMIP+P AF+IQQLG+VDVDDL+I LK VPYFPS G       GLR TT++TYM LNMQE           
Subjt:  VKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMGLRETTLSTYMQLNMQE-----------

Query:  --------------AIADLTPPGTDNYGYMLFNPHIGININS
                      AIADLTP GTDNYGYMLFNPHIGINI+S
Subjt:  --------------AIADLTPPGTDNYGYMLFNPHIGININS

XP_008459635.1 PREDICTED: uncharacterized protein LOC103498698 [Cucumis melo]9.3e-4050.24Show/hide
Query:  MAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG-------------
        MAAVLATGCMVMAY+KCRA++L  G  HL DSNR+KMP ITSDLMIP+P AF+IQQLG+VDVDDL+I LK VPYFPS G     P G             
Subjt:  MAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG-------------

Query:  ---------------------------------------LRETTLSTYM-----------QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS-
                                               L ET  +  M           Q NM  AIADLTP GTDNYGYMLFNPHIGINI+SYGAFS 
Subjt:  ---------------------------------------LRETTLSTYM-----------QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS-

Query:  -NVVFEDWSSI
         N+ F++WS+I
Subjt:  -NVVFEDWSSI

XP_031112437.1 crossover junction endonuclease MUS81 isoform X1 [Ipomoea triloba]1.0e-1427.89Show/hide
Query:  TELPTDESPEGFTESPTEKL-PEGNHAYTLELRKEGFLGNFFPRSSSTSLY---IELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVL
        +ELP   +     ++P   L   GN  +T EL + G +G F+ R   T      IE+       GI  TL   L+R ++LK  ++   ++     +A VL
Subjt:  TELPTDESPEGFTESPTEKL-PEGNHAYTLELRKEGFLGNFFPRSSSTSLY---IELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVL

Query:  ATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP--------------------
        A GC + AY+K + ++ T+       SN LKMPRI+  L +P   AFAIQQLG V+V D       +P FP+ G     P                    
Subjt:  ATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP--------------------

Query:  -MGLR------------------------------------ETTLSTYMQL------NMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS
         +G+R                                    +  + T+ Q       N   A  DL P G D++G M+ +PH+GIN++ Y A S
Subjt:  -MGLR------------------------------------ETTLSTYMQL------NMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS

XP_031112442.1 crossover junction endonuclease MUS81 isoform X4 [Ipomoea triloba]1.0e-1427.89Show/hide
Query:  TELPTDESPEGFTESPTEKL-PEGNHAYTLELRKEGFLGNFFPRSSSTSLY---IELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVL
        +ELP   +     ++P   L   GN  +T EL + G +G F+ R   T      IE+       GI  TL   L+R ++LK  ++   ++     +A VL
Subjt:  TELPTDESPEGFTESPTEKL-PEGNHAYTLELRKEGFLGNFFPRSSSTSLY---IELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVL

Query:  ATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP--------------------
        A GC + AY+K + ++ T+       SN LKMPRI+  L +P   AFAIQQLG V+V D       +P FP+ G     P                    
Subjt:  ATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP--------------------

Query:  -MGLR------------------------------------ETTLSTYMQL------NMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS
         +G+R                                    +  + T+ Q       N   A  DL P G D++G M+ +PH+GIN++ Y A S
Subjt:  -MGLR------------------------------------ETTLSTYMQL------NMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS

YP_009026399.2 Coat Protein [Arhar cryptic virus-I]1.3e-1728.83Show/hide
Query:  GNHAYTLELRKEGFLGNFFPRS--SSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHL
        GN  Y +EL+++G L + FPR   S+    I ++ Q L  G   T+ A+L R  +LK  L  E   T  + +A  LA GC ++ ++K RA+ LT+  +  
Subjt:  GNHAYTLELRKEGFLGNFFPRS--SSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHL

Query:  WDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP-------------------MGLRETTLST---------------
         +++ L+ PR  +D+ IPT  AFAIQQLG V++ DL   LK VP  P  G     P                   +G+R + + T               
Subjt:  WDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP-------------------MGLRETTLST---------------

Query:  ----------YMQLNMQEAIA----------DLTPPGT----------DNYGYMLFNPHIGININSYGAFSNVVFEDWSSI
                  Y + N  E +A          +  P  T           NYG M+  PH+GI+++S+ A S    + WS++
Subjt:  ----------YMQLNMQEAIA----------DLTPPGT----------DNYGYMLFNPHIGININSYGAFSNVVFEDWSSI

TrEMBL top hitse value%identityAlignment
A0A0A1EJ40 Putative coat protein9.4e-1427.78Show/hide
Query:  KAEVLGELEVVEPAFTELPTDESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLM-----NGIQATLSAALQRHYKLKGNL
        KA V    ++     TE PT   P  F +S    +  GN  Y  ELR EG  G F PR  +   + E  P  ++     +GI  T   A+    + K   
Subjt:  KAEVLGELEVVEPAFTELPTDESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLM-----NGIQATLSAALQRHYKLKGNL

Query:  NYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFP----SAGTPL---
        N    +     +A  LA G M+  Y K RA+I  +     +    LK P+  +DL +  P AFAIQQLG+V+V +L    + VP FP    + G PL   
Subjt:  NYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFP----SAGTPL---

Query:  --------------------------------------------------------VSPMGLRETTLSTYMQLNMQEAIADLTPPGTDNYGYMLFNPHIG
                                                                 S M +  T        +   AI DLTP G D YGY+L  PH G
Subjt:  --------------------------------------------------------VSPMGLRETTLSTYMQLNMQEAIADLTPPGTDNYGYMLFNPHIG

Query:  ININSY
        IN+ +Y
Subjt:  ININSY

A0A1S3CAR5 uncharacterized protein LOC1034986984.5e-4050.24Show/hide
Query:  MAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG-------------
        MAAVLATGCMVMAY+KCRA++L  G  HL DSNR+KMP ITSDLMIP+P AF+IQQLG+VDVDDL+I LK VPYFPS G     P G             
Subjt:  MAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG-------------

Query:  ---------------------------------------LRETTLSTYM-----------QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS-
                                               L ET  +  M           Q NM  AIADLTP GTDNYGYMLFNPHIGINI+SYGAFS 
Subjt:  ---------------------------------------LRETTLSTYM-----------QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSYGAFS-

Query:  -NVVFEDWSSI
         N+ F++WS+I
Subjt:  -NVVFEDWSSI

A0A5D3BKU9 Putative coat protein2.5e-4348.35Show/hide
Query:  DESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAY
        DES E F ES T++LP GNHAY LELR+ G LGNFFPR SST+  IELHPQRLM G                           F  +A            
Subjt:  DESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAY

Query:  VKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMGLRETTLSTYMQLNMQE-----------
                      +W    +KMP ITSDLMIP+P AF+IQQLG+VDVDDL+I LK VPYFPS G       GLR TT++TYM LNMQE           
Subjt:  VKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMGLRETTLSTYMQLNMQE-----------

Query:  --------------AIADLTPPGTDNYGYMLFNPHIGININS
                      AIADLTP GTDNYGYMLFNPHIGINI+S
Subjt:  --------------AIADLTPPGTDNYGYMLFNPHIGININS

A4Z4V3 Putative coat protein4.2e-1425.71Show/hide
Query:  PEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSS--TSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYV
        P  F +S +     GN  +  +LR EG  G F PR  +  T   + L P      I+ T+S ++    + K   N + ++     +A  LA G  +  ++
Subjt:  PEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSS--TSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYV

Query:  KCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG----------------------------
        K RA+I  +     ++   LK P+  +DL +  P AFAIQQLG+V++ +L    + VP  P  G     P G                            
Subjt:  KCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMG----------------------------

Query:  ---------LRE-----------------------TTLSTYM---QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSY
                 LR+                        TLS ++   ++N    I DLTP G D YGY++  PH+GIN++++
Subjt:  ---------LRE-----------------------TTLSTYM---QLNMQEAIADLTPPGTDNYGYMLFNPHIGININSY

X5M5C8 Coat Protein6.3e-1828.83Show/hide
Query:  GNHAYTLELRKEGFLGNFFPRS--SSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHL
        GN  Y +EL+++G L + FPR   S+    I ++ Q L  G   T+ A+L R  +LK  L  E   T  + +A  LA GC ++ ++K RA+ LT+  +  
Subjt:  GNHAYTLELRKEGFLGNFFPRS--SSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSMTEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHL

Query:  WDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP-------------------MGLRETTLST---------------
         +++ L+ PR  +D+ IPT  AFAIQQLG V++ DL   LK VP  P  G     P                   +G+R + + T               
Subjt:  WDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSP-------------------MGLRETTLST---------------

Query:  ----------YMQLNMQEAIA----------DLTPPGT----------DNYGYMLFNPHIGININSYGAFSNVVFEDWSSI
                  Y + N  E +A          +  P  T           NYG M+  PH+GI+++S+ A S    + WS++
Subjt:  ----------YMQLNMQEAIA----------DLTPPGT----------DNYGYMLFNPHIGININSYGAFSNVVFEDWSSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAAAATCTCTCTTGTCATGCAAGGCAGAAGTACTTGGCGAACTTGAGGTTGTAGAACCAGCATTTACAGAGTTGCCTACTGATGAATCACCTGAAGGGTTTAC
AGAGTCACCTACTGAAAAATTACCTGAAGGGAATCATGCCTACACACTCGAGCTTAGGAAGGAAGGGTTCCTAGGCAACTTCTTTCCTAGAAGTAGTTCTACTTCGCTTT
ACATTGAGCTTCACCCCCAGCGGTTAATGAATGGTATACAGGCTACTCTGAGTGCGGCATTACAACGTCACTATAAACTCAAAGGTAATCTGAACTATGAGATGTCGATG
ACTGAGTTTGAACAAATGGCTGCAGTTCTCGCCACTGGCTGTATGGTAATGGCATATGTGAAGTGCCGTGCAGTTATTCTCACTAATGGGTCGTCTCATTTGTGGGATTC
TAATAGGTTGAAAATGCCAAGGATAACCTCAGATCTCATGATCCCAACCCCGCTTGCCTTTGCTATTCAACAATTGGGATTTGTGGACGTTGATGACCTTCATATTAGGT
TAAAGGCTGTCCCATACTTTCCAAGTGCAGGCACACCTTTGGTGTCCCCAATGGGTTTACGTGAAACAACGTTGAGTACTTACATGCAGTTGAATATGCAAGAAGCTATT
GCTGACCTGACTCCACCTGGGACCGACAATTATGGTTATATGCTGTTTAACCCACACATTGGCATCAACATCAATTCTTATGGAGCCTTTTCAAATGTAGTCTTTGAAGA
TTGGAGTAGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGAAAATCTCTCTTGTCATGCAAGGCAGAAGTACTTGGCGAACTTGAGGTTGTAGAACCAGCATTTACAGAGTTGCCTACTGATGAATCACCTGAAGGGTTTAC
AGAGTCACCTACTGAAAAATTACCTGAAGGGAATCATGCCTACACACTCGAGCTTAGGAAGGAAGGGTTCCTAGGCAACTTCTTTCCTAGAAGTAGTTCTACTTCGCTTT
ACATTGAGCTTCACCCCCAGCGGTTAATGAATGGTATACAGGCTACTCTGAGTGCGGCATTACAACGTCACTATAAACTCAAAGGTAATCTGAACTATGAGATGTCGATG
ACTGAGTTTGAACAAATGGCTGCAGTTCTCGCCACTGGCTGTATGGTAATGGCATATGTGAAGTGCCGTGCAGTTATTCTCACTAATGGGTCGTCTCATTTGTGGGATTC
TAATAGGTTGAAAATGCCAAGGATAACCTCAGATCTCATGATCCCAACCCCGCTTGCCTTTGCTATTCAACAATTGGGATTTGTGGACGTTGATGACCTTCATATTAGGT
TAAAGGCTGTCCCATACTTTCCAAGTGCAGGCACACCTTTGGTGTCCCCAATGGGTTTACGTGAAACAACGTTGAGTACTTACATGCAGTTGAATATGCAAGAAGCTATT
GCTGACCTGACTCCACCTGGGACCGACAATTATGGTTATATGCTGTTTAACCCACACATTGGCATCAACATCAATTCTTATGGAGCCTTTTCAAATGTAGTCTTTGAAGA
TTGGAGTAGTATTTAA
Protein sequenceShow/hide protein sequence
MKGKSLLSCKAEVLGELEVVEPAFTELPTDESPEGFTESPTEKLPEGNHAYTLELRKEGFLGNFFPRSSSTSLYIELHPQRLMNGIQATLSAALQRHYKLKGNLNYEMSM
TEFEQMAAVLATGCMVMAYVKCRAVILTNGSSHLWDSNRLKMPRITSDLMIPTPLAFAIQQLGFVDVDDLHIRLKAVPYFPSAGTPLVSPMGLRETTLSTYMQLNMQEAI
ADLTPPGTDNYGYMLFNPHIGININSYGAFSNVVFEDWSSI