; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003440 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003440
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain-containing protein
Genome locationChr08:1366252..1366740
RNA-Seq ExpressionHG10003440
SyntenyHG10003440
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]1.0e-4466.03Show/hide
Query:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS
        K  +  ++DRISLLPD +LH ILS  +TK VVQTC+LSKRWK LW  IPTLNFDYNS+ S  SFN DDE+ K+ SFK FI +VLSKH   +IQKLTYTSS
Subjt:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS

Query:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG
         N  D  VLVE LI YAGS+NVQQLCINTYN +  Y W+YC   CSSL  LKMVCG
Subjt:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG

KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]5.4e-4665.41Show/hide
Query:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT
        +K T+T+ EDRISLLPDC+LHEILSFL+TKSVVQTCVLSKRWK LW +IPTLNFDYN SYS   F T +D+  KQTSFKNFII+VLSK  T +I+KL YT
Subjt:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT

Query:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC
        SS N  DL +L +FLI+YA S++VQQL +NT+N + ++ W++C+  +TCSSL HLK+VC
Subjt:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC

XP_004141639.1 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]5.4e-4665.41Show/hide
Query:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT
        +K T+T+ EDRISLLPDC+LHEILSFL+TKSVVQTCVLSKRWK LW +IPTLNFDYN SYS   F T +D+  KQTSFKNFII+VLSK  T +I+KL YT
Subjt:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT

Query:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC
        SS N  DL +L +FLI+YA S++VQQL +NT+N + ++ W++C+  +TCSSL HLK+VC
Subjt:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]1.1e-5172.73Show/hide
Query:  MSNLKKK-KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINI
        M NLKKK KKTKT RED+IS +PDCVLHEILS L+TK VVQTCVLSKRWKNLW  IPTLNF YN Y SLLS   +DE+ KQ  FK FII+VLSKH   NI
Subjt:  MSNLKKK-KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINI

Query:  QKLTYTSSGNINDLRVLVEFLITYAGSYNVQQLCIN-TYNAVATYNWNYCLSTCSSLTHLKMVCG
        QKLTYTSSG+ ++L VLVEFLI YAGS+NVQQLCIN TY  V  + WNYC STCSSL  LKM+CG
Subjt:  QKLTYTSSGNINDLRVLVEFLITYAGSYNVQQLCIN-TYNAVATYNWNYCLSTCSSLTHLKMVCG

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]1.7e-4770.47Show/hide
Query:  EDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY--SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDL
        EDRISLLPD +LH ILS L+TK VVQTCVLSKRWK LW  IPTLNFDYNSY  SL SF  +D++ K+ SFK FI +VLSKH T NI KLTYT+S N ++L
Subjt:  EDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY--SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDL

Query:  RVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVC
         VLVEFLI YAGS NVQQLCINTY+ +  Y+WNYC S CSSL  LKMVC
Subjt:  RVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVC

TrEMBL top hitse value%identityAlignment
A0A0A0KSW6 F-box domain-containing protein2.6e-4665.41Show/hide
Query:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT
        +K T+T+ EDRISLLPDC+LHEILSFL+TKSVVQTCVLSKRWK LW +IPTLNFDYN SYS   F T +D+  KQTSFKNFII+VLSK  T +I+KL YT
Subjt:  KKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYN-SYSLLSFNT-DDEKFKQTSFKNFIIQVLSKHHTINIQKLTYT

Query:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC
        SS N  DL +L +FLI+YA S++VQQL +NT+N + ++ W++C+  +TCSSL HLK+VC
Subjt:  SSGNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCL--STCSSLTHLKMVC

A0A0A0KUU7 F-box domain-containing protein2.8e-4065.31Show/hide
Query:  EDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLS-FNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR
        ++RISLLPD +LH ILS L+TK VVQTC+LSKRWK LW  IPTLNFDYNS+S  S F  DDE+ K+ SFK FI +VLS H   NI KLTYTSS N  D  
Subjt:  EDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLS-FNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR

Query:  VLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMV
        VLVE LI YAGS+ VQQLCINTYN +  Y W+YC   CSSL  LKM+
Subjt:  VLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMV

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.1e-4465.38Show/hide
Query:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS
        K  +   +DRISLLPD +LH ILS  +TK VVQTC+LSKRWK LW  IPTLNFDYNS+ S  SFN DDE+ K+ SFK FI +VLSKH   +IQKLTYTSS
Subjt:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS

Query:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG
         N  D  VLVE LI YAGS+NVQQLC+NTYN +  Y W+YC   CSSL  LKMVCG
Subjt:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X21.1e-4465.38Show/hide
Query:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS
        K  +   +DRISLLPD +LH ILS  +TK VVQTC+LSKRWK LW  IPTLNFDYNS+ S  SFN DDE+ K+ SFK FI +VLSKH   +IQKLTYTSS
Subjt:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS

Query:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG
         N  D  VLVE LI YAGS+NVQQLC+NTYN +  Y W+YC   CSSL  LKMVCG
Subjt:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG

A0A5A7TCF1 F-box/LRR-repeat protein4.9e-4566.03Show/hide
Query:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS
        K  +  ++DRISLLPD +LH ILS  +TK VVQTC+LSKRWK LW  IPTLNFDYNS+ S  SFN DDE+ K+ SFK FI +VLSKH   +IQKLTYTSS
Subjt:  KKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSY-SLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSS

Query:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG
         N  D  VLVE LI YAGS+NVQQLCINTYN +  Y W+YC   CSSL  LKMVCG
Subjt:  GNINDLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG

SwissProt top hitse value%identityAlignment
O23257 Putative F-box/LRR-repeat protein At4g139601.2e-0840.23Show/hide
Query:  DRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLT
        D +S LPD VL+ ILSFL TK    T +LSKRW+NL+  +P L+ D + +       +D    Q SF  F+ +VL+      I+KL+
Subjt:  DRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLT

Q6NKX3 F-box/FBD/LRR-repeat protein At2g042302.0e-1135.56Show/hide
Query:  LKKKKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNT--DDEKFKQTSFKNFIIQVLSKHHTINIQKL
        +++K KT +  EDRIS LPD +L +ILS L T++ + T VLSKRW++LW  +P L FD N      FN   DD+    T F   + + LS H    ++ L
Subjt:  LKKKKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNT--DDEKFKQTSFKNFIIQVLSKHHTINIQKL

Query:  TYTSSGNINDLRVLVEFLITYAGSYNVQQLCINTY
          +  G  + L V +   I  A +  V++L ++++
Subjt:  TYTSSGNINDLRVLVEFLITYAGSYNVQQLCINTY

Q7X7A4 MEIOTIC F-BOX protein MOF1.4e-0940.51Show/hide
Query:  KREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLS
        + EDR+S LPDC+L +IL+ L ++  VQT VLS+RW+NLW  +  +  D  S+ L   + D  +F+    ++F   VLS
Subjt:  KREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLS

Q9FZ52 F-box/FBD/LRR-repeat protein At1g169301.1e-0944.19Show/hide
Query:  KTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHH
        K K +  DRIS LPD +L +ILS L TK  V T VLSKRW+NLW+ +P L+ D N++       DD+ F   SF N  +   ++ H
Subjt:  KTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHH

Q9SMU0 Putative F-box/FBD/LRR-repeat protein At3g490301.9e-0936.63Show/hide
Query:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR
        +EDRIS LP+ +L +ILS + T++V+ T VLSKRW++LW  +P L FD+         T D K+ QT F   + + L+ H    ++ L    +  I+ L 
Subjt:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR

Query:  V
        +
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein7.8e-1144.19Show/hide
Query:  KTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHH
        K K +  DRIS LPD +L +ILS L TK  V T VLSKRW+NLW+ +P L+ D N++       DD+ F   SF N  +   ++ H
Subjt:  KTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHH

AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein1.4e-1235.56Show/hide
Query:  LKKKKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNT--DDEKFKQTSFKNFIIQVLSKHHTINIQKL
        +++K KT +  EDRIS LPD +L +ILS L T++ + T VLSKRW++LW  +P L FD N      FN   DD+    T F   + + LS H    ++ L
Subjt:  LKKKKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNT--DDEKFKQTSFKNFIIQVLSKHHTINIQKL

Query:  TYTSSGNINDLRVLVEFLITYAGSYNVQQLCINTY
          +  G  + L V +   I  A +  V++L ++++
Subjt:  TYTSSGNINDLRVLVEFLITYAGSYNVQQLCINTY

AT3G49030.1 FBD, F-box and Leucine Rich Repeat domains containing protein1.3e-1036.63Show/hide
Query:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR
        +EDRIS LP+ +L +ILS + T++V+ T VLSKRW++LW  +P L FD+         T D K+ QT F   + + L+ H    ++ L    +  I+ L 
Subjt:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR

Query:  V
        +
Subjt:  V

AT3G49030.2 FBD, F-box and Leucine Rich Repeat domains containing protein1.3e-1036.63Show/hide
Query:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR
        +EDRIS LP+ +L +ILS + T++V+ T VLSKRW++LW  +P L FD+         T D K+ QT F   + + L+ H    ++ L    +  I+ L 
Subjt:  REDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNINDLR

Query:  V
        +
Subjt:  V

AT4G13960.1 F-box/RNI-like superfamily protein8.7e-1040.23Show/hide
Query:  DRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLT
        D +S LPD VL+ ILSFL TK    T +LSKRW+NL+  +P L+ D + +       +D    Q SF  F+ +VL+      I+KL+
Subjt:  DRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAACCTCAAGAAGAAGAAGAAAACAAAAACAAAAAGGGAAGACAGAATCAGCCTTCTCCCAGATTGTGTTCTTCATGAAATTCTATCGTTTTTAGACACAAAATC
AGTAGTTCAGACTTGTGTTCTATCAAAACGATGGAAAAACCTTTGGATTCAAATCCCCACTCTCAACTTTGATTACAATTCTTACTCATTATTATCATTCAATACCGACG
ATGAAAAATTCAAACAAACATCCTTCAAGAACTTCATTATTCAAGTTTTATCAAAACACCACACCATAAACATTCAAAAATTAACCTACACTTCCTCCGGAAACATAAAT
GATTTGAGGGTTTTAGTAGAATTCTTAATAACCTATGCTGGATCTTACAATGTTCAACAACTTTGCATCAATACTTACAATGCAGTTGCTACTTATAATTGGAATTATTG
CCTTTCAACGTGTTCTTCCCTCACTCATTTGAAGATGGTATGTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAACCTCAAGAAGAAGAAGAAAACAAAAACAAAAAGGGAAGACAGAATCAGCCTTCTCCCAGATTGTGTTCTTCATGAAATTCTATCGTTTTTAGACACAAAATC
AGTAGTTCAGACTTGTGTTCTATCAAAACGATGGAAAAACCTTTGGATTCAAATCCCCACTCTCAACTTTGATTACAATTCTTACTCATTATTATCATTCAATACCGACG
ATGAAAAATTCAAACAAACATCCTTCAAGAACTTCATTATTCAAGTTTTATCAAAACACCACACCATAAACATTCAAAAATTAACCTACACTTCCTCCGGAAACATAAAT
GATTTGAGGGTTTTAGTAGAATTCTTAATAACCTATGCTGGATCTTACAATGTTCAACAACTTTGCATCAATACTTACAATGCAGTTGCTACTTATAATTGGAATTATTG
CCTTTCAACGTGTTCTTCCCTCACTCATTTGAAGATGGTATGTGGATAA
Protein sequenceShow/hide protein sequence
MSNLKKKKKTKTKREDRISLLPDCVLHEILSFLDTKSVVQTCVLSKRWKNLWIQIPTLNFDYNSYSLLSFNTDDEKFKQTSFKNFIIQVLSKHHTINIQKLTYTSSGNIN
DLRVLVEFLITYAGSYNVQQLCINTYNAVATYNWNYCLSTCSSLTHLKMVCG