; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003441 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003441
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box/LRR-repeat protein
Genome locationChr08:1371596..1373884
RNA-Seq ExpressionHG10003441
SyntenyHG10003441
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]3.9e-4042.74Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   +IQKL Y+SS N DE +LVELL  YA  H VQQLCIN Y++      +W  CF   SSL  LK++  ++ DWG L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++  I +F GCPNL SLVL++       I AP+LENF++      ELT  ++EL TP+LK +   N+LP++ + +  EF C+ K+ IQ+ D VF 
Subjt:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSS
         +  G   ++L + F  LL V HNA SFTLP+KA Q    P I  + S
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSS

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]7.8e-4943.6Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   +IQKL Y+SS N DE +LVELL  YA  H VQQLC+N Y++      +W  CF   SSL  LK++  ++ DWG L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++  I +F GCPNL SLVL++       I AP+LENF++      ELT  ++EL TP+LK +   N+LP++ + +  EF C+ K+ IQ+ D VF 
Subjt:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE
         +  G   ++L + F  LL V HNA SFTLP+KA Q+ S  S +ELS  N+RHL+LK   +    DL    L +LLK P LET+V+L+E
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]2.4e-4247.23Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LSE C    IQKL Y+SS N+DE++LVELL  +AR H V++L ++ Y++       WK C    SSLTVLK++  ++ DWG L LP L   EIE EDC+
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIEL-CTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRF
            +K I +F GCPNL SLVLIN       ICAPKLEN  +V  S  EL   E+EL CT SL+ +  +N+LP + NSA LEF C+ K+ I+V ++ F  
Subjt:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIEL-CTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRF

Query:  NKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQ
           G   +     FS+L +VFHNARSF LPL   Q
Subjt:  NKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQ

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]3.4e-5244.11Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESE--D
        +LS+HC   NIQKL Y+SS ++DE++LVE L  YA  H VQQLCIN  + +      W  CF   SSL  LK+I  ++ +W  L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESE--D

Query:  CQLYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++    +F GCPNL SLV ++       I APKLEN E+  FS + LT  E+EL TP LK++   N+LPI+ + +  EF C+HK+ IQ++D VF 
Subjt:  CQLYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHEHYEKTRLS
            G   +K N+NF +LL+VFHNARSFTLPLKA Q+        LS  NIRHL+LK N T            +LLK PNLET  +L+E  +   LS
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHEHYEKTRLS

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]7.0e-5043.05Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   NI KL Y++S N+DE++LVE L  YA    VQQLCIN Y  +      W  CF   SSL  LK++ +++ DWG L +P L   EIE   C 
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN-----SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDF
         Y      ++K I +F GCPNL SLVL++       I APKL+N ++      ELT  E+EL TP+L+T+   N+LPI+ + +  EF C+HK+ IQ+ D 
Subjt:  LYN-----SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDF

Query:  VFRFNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHEHYE
        +  F ++G   +KL +NF +LL VFHNARSFTLPLKA  + S+    EL   N+ HL+LK   +          L +LLK P L+T V+L+E  E
Subjt:  VFRFNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHEHYE

TrEMBL top hitse value%identityAlignment
A0A0A0KUU7 F-box domain-containing protein3.3e-2942.01Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS HC   NI KL Y+SS N DE +LVELL  YA  HKVQQLCIN Y++      +W  CF   SSL  LK+I     DW A             ++  
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRFN
         YN    I +F GCPNL SLVL++       I AP+LE F++      ELT  ++EL TP+LKT+   N+LPI+ + +  EF C+HK+ IQ++D VF  +
Subjt:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRFN

Query:  KIGLALEKLNTNFSQLLQV
          G   ++L + F  LL V
Subjt:  KIGLALEKLNTNFSQLLQV

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X13.8e-4943.6Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   +IQKL Y+SS N DE +LVELL  YA  H VQQLC+N Y++      +W  CF   SSL  LK++  ++ DWG L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++  I +F GCPNL SLVL++       I AP+LENF++      ELT  ++EL TP+LK +   N+LP++ + +  EF C+ K+ IQ+ D VF 
Subjt:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE
         +  G   ++L + F  LL V HNA SFTLP+KA Q+ S  S +ELS  N+RHL+LK   +    DL    L +LLK P LET+V+L+E
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X22.5e-3740.14Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   +IQKL Y+SS N DE +LVELL  YA  H VQQLC+N Y++      +W  CF   SSL  LK++  ++ DWG L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++  I +F GCPNL SLVL++       I AP+LENF++      ELT                              FP   K+ IQ+ D VF 
Subjt:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE
         +  G   ++L + F  LL V HNA SFTLP+KA Q+ S  S +ELS  N+RHL+LK   +    DL    L +LLK P LET+V+L+E
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHE

A0A5A7TCF1 F-box/LRR-repeat protein1.9e-4042.74Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LS+HC   +IQKL Y+SS N DE +LVELL  YA  H VQQLCIN Y++      +W  CF   SSL  LK++  ++ DWG L LP L   EI+ +   
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR
             ++  I +F GCPNL SLVL++       I AP+LENF++      ELT  ++EL TP+LK +   N+LP++ + +  EF C+ K+ IQ+ D VF 
Subjt:  LYN--SHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFR

Query:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSS
         +  G   ++L + F  LL V HNA SFTLP+KA Q    P I  + S
Subjt:  FNKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQIFSVPSIRELSS

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.2e-4247.23Show/hide
Query:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ
        +LSE C    IQKL Y+SS N+DE++LVELL  +AR H V++L ++ Y++       WK C    SSLTVLK++  ++ DWG L LP L   EIE EDC+
Subjt:  MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQ

Query:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIEL-CTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRF
            +K I +F GCPNL SLVLIN       ICAPKLEN  +V  S  EL   E+EL CT SL+ +  +N+LP + NSA LEF C+ K+ I+V ++ F  
Subjt:  LYNSHKRIELFFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIEL-CTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRF

Query:  NKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQ
           G   +     FS+L +VFHNARSF LPL   Q
Subjt:  NKIGLALEKLNTNFSQLLQVFHNARSFTLPLKAIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATCTGAACACTGCGGTGGAGAGAATATTCAAAAATTGTTCTACTCTTCCTCTTCAAACCAAGATGAAATCATTTTAGTAGAATTATTGACATTCTATGCAAGATG
CCACAAAGTTCAACAACTTTGTATCAATATCTACCATCTTCTTCATCCAAGATCAGCTAAATGGAAAGATTGCTTTTTGGGATTTTCATCTCTCACTGTGCTGAAGGTCA
TAACTTCATATATGGTTGATTGGGGTGCCTTGCAATTACCATTATTGACTACTTTTGAGATTGAATCTGAAGATTGCCAACTTTATAATTCTCACAAAAGAATTGAGTTG
TTCTTCGGCTGTCCAAATTTAACATCTTTGGTTTTAATTAATACTTTTGTTGGAGGTGTTTGTATTTGTGCGCCAAAACTTGAGAATTTTGAAATTGTTGGTTTTTCTCC
TTGGGAATTAACTTTACATGAAATTGAATTGTGTACACCAAGCCTCAAAACCCTCAAGCTTACCAATCTTTTACCCATCATTCTCAACTCAGCTCCTTTGGAATTTCCAT
GCATGCACAAATTATGTATACAAGTTGACGATTTTGTATTTAGATTTAACAAAATAGGTTTAGCCTTAGAAAAGTTGAATACAAATTTCTCTCAGTTGCTTCAAGTCTTT
CATAATGCAAGGTCTTTCACACTACCTTTGAAGGCAATTCAGATCTTTTCTGTTCCTTCTATAAGAGAATTATCTTCTGGTAACATCAGACATTTGAAGTTGAAAATCAA
TAGGACCAACGAGTTTGTAGACTTGCCCATTGATGCATTGGCGTATTTACTTAAACTTCCCAATTTAGAAACGTTGGTAATTCTCCATGAGCATTACGAGAAGACAAGGC
TAAGTGGGGGTCCTGTCCCACCAGCAAATCTTATCGTAATCTCTTTTTTAAAAGAAAAGATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTATCTGAACACTGCGGTGGAGAGAATATTCAAAAATTGTTCTACTCTTCCTCTTCAAACCAAGATGAAATCATTTTAGTAGAATTATTGACATTCTATGCAAGATG
CCACAAAGTTCAACAACTTTGTATCAATATCTACCATCTTCTTCATCCAAGATCAGCTAAATGGAAAGATTGCTTTTTGGGATTTTCATCTCTCACTGTGCTGAAGGTCA
TAACTTCATATATGGTTGATTGGGGTGCCTTGCAATTACCATTATTGACTACTTTTGAGATTGAATCTGAAGATTGCCAACTTTATAATTCTCACAAAAGAATTGAGTTG
TTCTTCGGCTGTCCAAATTTAACATCTTTGGTTTTAATTAATACTTTTGTTGGAGGTGTTTGTATTTGTGCGCCAAAACTTGAGAATTTTGAAATTGTTGGTTTTTCTCC
TTGGGAATTAACTTTACATGAAATTGAATTGTGTACACCAAGCCTCAAAACCCTCAAGCTTACCAATCTTTTACCCATCATTCTCAACTCAGCTCCTTTGGAATTTCCAT
GCATGCACAAATTATGTATACAAGTTGACGATTTTGTATTTAGATTTAACAAAATAGGTTTAGCCTTAGAAAAGTTGAATACAAATTTCTCTCAGTTGCTTCAAGTCTTT
CATAATGCAAGGTCTTTCACACTACCTTTGAAGGCAATTCAGATCTTTTCTGTTCCTTCTATAAGAGAATTATCTTCTGGTAACATCAGACATTTGAAGTTGAAAATCAA
TAGGACCAACGAGTTTGTAGACTTGCCCATTGATGCATTGGCGTATTTACTTAAACTTCCCAATTTAGAAACGTTGGTAATTCTCCATGAGCATTACGAGAAGACAAGGC
TAAGTGGGGGTCCTGTCCCACCAGCAAATCTTATCGTAATCTCTTTTTTAAAAGAAAAGATTCCATAA
Protein sequenceShow/hide protein sequence
MLSEHCGGENIQKLFYSSSSNQDEIILVELLTFYARCHKVQQLCINIYHLLHPRSAKWKDCFLGFSSLTVLKVITSYMVDWGALQLPLLTTFEIESEDCQLYNSHKRIEL
FFGCPNLTSLVLINTFVGGVCICAPKLENFEIVGFSPWELTLHEIELCTPSLKTLKLTNLLPIILNSAPLEFPCMHKLCIQVDDFVFRFNKIGLALEKLNTNFSQLLQVF
HNARSFTLPLKAIQIFSVPSIRELSSGNIRHLKLKINRTNEFVDLPIDALAYLLKLPNLETLVILHEHYEKTRLSGGPVPPANLIVISFLKEKIP