; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10003473 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003473
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationChr08:1872134..1877615
RNA-Seq ExpressionHG10003473
SyntenyHG10003473
Gene Ontology termsGO:0000972 - transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery (biological process)
GO:0006405 - RNA export from nucleus (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459578.1 PREDICTED: protein RAE1 [Cucumis melo]2.2e-15981.1Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMH+APVKEVAWIPEL+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

XP_011656080.1 protein RAE1 [Cucumis sativus]3.8e-15981.1Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMH+APVKEVAWIPEL+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

XP_022144434.1 protein RAE1-like isoform X1 [Momordica charantia]1.5e-15880.52Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNV STPKA ISHD PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMT+AMHEAPVKEVAWIPE+SLL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSM VR+PLMVVGTADRNLIVF+L++PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE++ANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE+EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

XP_022955507.1 protein RAE1-like [Cucurbita moschata]3.6e-15780.52Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNV STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMHEAPVKEVAWIPE+SLL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSM VR+PLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE++ANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKT IYLHLPQE+EVKGKPRVGG GRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

XP_038890307.1 protein RAE1 [Benincasa hispida]7.7e-16081.4Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNV STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMHEAPVKEVAWIPE+SLL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSM+VRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

TrEMBL top hitse value%identityAlignment
A0A0A0KXV7 WD_REPEATS_REGION domain-containing protein1.9e-15981.1Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMH+APVKEVAWIPEL+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

A0A1S3CAI4 protein RAE11.1e-15981.1Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMH+APVKEVAWIPEL+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

A0A5D3BQD6 Protein RAE11.1e-15981.1Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMH+APVKEVAWIPEL+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE+MANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

A0A6J1CSA6 protein RAE1-like isoform X17.0e-15980.52Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNV STPKA ISHD PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMT+AMHEAPVKEVAWIPE+SLL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSM VR+PLMVVGTADRNLIVF+L++PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE++ANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKTYIYLHLPQE+EVKGKPRVGGGGRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

A0A6J1GU54 protein RAE1-like1.7e-15780.52Show/hide
Query:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
        MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNV STPKA ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG
Subjt:  MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGG

Query:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------
        QAMTVAMHEAPVKEVAWIPE+SLL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSM VR+PLMVVGTADRNLIVF+L+ PQ                   
Subjt:  QAMTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ-------------------

Query:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------
                VGSIEGRVGVHHLDE++ANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK                       
Subjt:  --------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK-----------------------

Query:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
         VCYDWSKGAENHNPATAKT IYLHLPQE+EVKGKPRVGG GRK
Subjt:  -VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

SwissProt top hitse value%identityAlignment
P78406 mRNA export factor7.2e-6842.69Show/hide
Query:  NPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA
        N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G  +  PKA   H  PVL   W DDG+ VF+  CDK  KMW  LS  QA
Subjt:  NPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA

Query:  MTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP----------
        + +A H+APVK + WI  P  S + +GSWDKT+K+WDTR  NP++  QLP+RCY   V +P+ VV TA+R LIV+ L           +P          
Subjt:  MTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP----------

Query:  -----------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV----------
                    +GSIEGRV +H+++    A  NFTFKCHR          +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK           
Subjt:  -----------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV----------

Query:  --------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR
                       YDWSKG E +NP   K YI+L   + A  + KPR
Subjt:  --------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR

Q38942 Protein RAE11.2e-13467.54Show/hide
Query:  AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA
        A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++ S PKA ISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQ 
Subjt:  AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA

Query:  MTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ---------------------
        +TVAMHE P+  +AWIP ++LLA+GSWDKT+KYWDTRQ NPV TQQLPD+CY+++V+HPLMVVGTADRNLIVF+L+ PQ                     
Subjt:  MTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ---------------------

Query:  ------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK------------------------V
              VGSIEGRVGVHHLD++  +KNFTFKCHRDG++IYSVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLK                         
Subjt:  ------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK------------------------V

Query:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
        CYDWSKGAENHNPATAK+ I+LHLPQE+EVK KPRVG  GRK
Subjt:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

Q5FVA9 mRNA export factor4.5e-7042.49Show/hide
Query:  SAFANPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLS
        +A  N NP K  EV  PP DS+S LSFSP     N L+A SW N VRCWE+  N   +   PKA   H  PVL   W DDG+ VF+  CDK  KMW  L+
Subjt:  SAFANPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLS

Query:  GGQAMTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR----------AP------
          Q++ +A H+AP+K V W+  P  S + +GSWDK++K+WDTR PNP+LT QLP+RCY   V +P+ VV TA+R LIV+ L           +P      
Subjt:  GGQAMTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR----------AP------

Query:  ---------------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV------
                        +GSIEGRV +H+++    A  NFTFKCHR          +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK       
Subjt:  ---------------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV------

Query:  ------------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR
                           YDWSKG E +NP   K YI+L   + A  + KPR
Subjt:  ------------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR

Q5RF99 mRNA export factor7.2e-6842.69Show/hide
Query:  NPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA
        N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G  +  PKA   H  PVL   W DDG+ VF+  CDK  KMW  LS  QA
Subjt:  NPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA

Query:  MTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP----------
        + +A H+APVK + WI  P  S + +GSWDKT+K+WDTR  NP++  QLP+RCY   V +P+ VV TA+R LIV+ L           +P          
Subjt:  MTVAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP----------

Query:  -----------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV----------
                    +GSIEGRV +H+++    A  NFTFKCHR          +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK           
Subjt:  -----------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV----------

Query:  --------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR
                       YDWSKG E +NP   K YI+L   + A  + KPR
Subjt:  --------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR

Q7ZWF0 mRNA export factor6.5e-6941.79Show/hide
Query:  NPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMT
        NP K  EV  PP DS+S L+FSP     N L+  SW N VRCWE+  N   V   PKA   H  PVL   W DDG+ VF+  CDK  KMW  L+  QA+ 
Subjt:  NPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMT

Query:  VAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP------------
        +A HE P++ + WI  P  S + +GSWDKT+K+WDTR PNP+++ Q+P+RCY   V +P+ VV TA+R LIV+ L           +P            
Subjt:  VAMHEAPVKEVAWI--PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDL----------RAP------------

Query:  ---------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV------------
                  +GSIEGRV +H+++    A  NFTFKCHR          +IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK             
Subjt:  ---------QVGSIEGRVGVHHLDEA-MANKNFTFKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKV------------

Query:  ------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR
                     YDWSKG E +NP   K YI+L   + A  + KPR
Subjt:  ------------CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR

Arabidopsis top hitse value%identityAlignment
AT1G15850.1 Transducin/WD40 repeat-like superfamily protein8.8e-5370.08Show/hide
Query:  NPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAM
        NPN S+E+  P +DS+SSLSFSPKA+ LVATSWD QVRCWEI ++ G++ S PK  +SHDQPVLCSAWKDDGTTVF+GGCDKQ KMWPLLSG Q  TVAM
Subjt:  NPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAM

Query:  HEAPVKEVAWIPELSLLASGSWDKTIK
        H+AP  ++AWIP ++LL +GSWDKT+K
Subjt:  HEAPVKEVAWIPELSLLASGSWDKTIK

AT1G49910.1 Transducin/WD40 repeat-like superfamily protein1.2e-3330.65Show/hide
Query:  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVK
        E++ PPSD +S+L FS  ++HL+ +SWD  VR ++     G+++   +    H   VL   + DD ++ FS   D +V+     + G+   +  HE PV+
Subjt:  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVK

Query:  EVAWIPELSLLASGSWDKTIKYWDTR-----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---APQ------------------------
         V +      + +GSWDKTIK WD R     +   + T   P+R  S+++    +VV TA R++ ++DLR    P+                        
Subjt:  EVAWIPELSLLASGSWDKTIKYWDTR-----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---APQ------------------------

Query:  VGSIEGRVGVHHLD--EAMANKNFTFKCHR---DGSEI-YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRL------------------------KV
        + S+EGRV +   D  EA   K + FKCHR   DG +I Y VN++ FHP++ TFA+ G DG  N WD ++K+RL                          
Subjt:  VGSIEGRVGVHHLD--EAMANKNFTFKCHR---DGSEI-YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRL------------------------KV

Query:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRV
         Y + +G + H P      I++    E EVK KP+V
Subjt:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRV

AT1G69400.1 Transducin/WD40 repeat-like superfamily protein1.7e-1624.91Show/hide
Query:  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVK
        E   P  D+VS L FSP++N+L+  SWD+ +R ++       V S+  +   + Q  L     ++ +T F+ G D  ++ +  L+ G   T+  H+    
Subjt:  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVK

Query:  EVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---------APQ------------------VGSIE
         + +  E   + S  +D+ IK+WDTRQ   ++                  +V   D ++ ++DLR         A Q                  VGS++
Subjt:  EVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---------APQ------------------VGSIE

Query:  GRVGVHHLDEAMANK-NFTFKCH---RDGS-EIYSVNSLNFHPV-HHTFATAGSDGAFNFWDKDSKQRL
        GRV V   + + +++  ++F+CH   R+G  +   +N++ F P    TF T  ++G    W+  S++RL
Subjt:  GRVGVHHLDEAMANK-NFTFKCH---RDGS-EIYSVNSLNFHPV-HHTFATAGSDGAFNFWDKDSKQRL

AT1G80670.1 Transducin/WD40 repeat-like superfamily protein8.3e-13667.54Show/hide
Query:  AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA
        A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++ S PKA ISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQ 
Subjt:  AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQA

Query:  MTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ---------------------
        +TVAMHE P+  +AWIP ++LLA+GSWDKT+KYWDTRQ NPV TQQLPD+CY+++V+HPLMVVGTADRNLIVF+L+ PQ                     
Subjt:  MTVAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ---------------------

Query:  ------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK------------------------V
              VGSIEGRVGVHHLD++  +KNFTFKCHRDG++IYSVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLK                         
Subjt:  ------VGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK------------------------V

Query:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
        CYDWSKGAENHNPATAK+ I+LHLPQE+EVK KPRVG  GRK
Subjt:  CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK

AT3G19590.1 Transducin/WD40 repeat-like superfamily protein9.7e-3631.47Show/hide
Query:  PNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMH
        P+   E++ PPSD +S+L FS  ++HL+ +SWD +VR +++  N      + K    H   VL   + DD  + FS G D +V+   + + G+   +  H
Subjt:  PNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMH

Query:  EAPVKEVAWIPELSLLASGSWDKTIKYWDTR-----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---APQ-------------------
        +  V+ V +      + +GSWDKT+K WD R     +   V T   P+R YSM++    +VV TA R++ ++DLR    P+                   
Subjt:  EAPVKEVAWIPELSLLASGSWDKTIKYWDTR-----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLR---APQ-------------------

Query:  -----VGSIEGRVGVHHLD--EAMANKNFTFKCHRDGSE----IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKVCYDWSK----------GAE
             + S+EGRV +   D  EA   K + FKCHR        +Y VNS+ FHP++ TFAT G DG  N WD ++K+RL   Y +SK            +
Subjt:  -----VGSIEGRVGVHHLD--EAMANKNFTFKCHRDGSE----IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKVCYDWSK----------GAE

Query:  NHNPATAKTY-------------IYLHLPQEAEVKGKPRV
            A A +Y             I++    E EVK KP+V
Subjt:  NHNPATAKTY-------------IYLHLPQEAEVKGKPRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCTAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGC
AACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCAGGTAATGTTGTCAGTACGCCTAAGGCTTTTATATCCCACGATCAACCGGTTTTATGCTCAG
CATGGAAGGATGATGGAACGACTGTGTTTTCTGGAGGCTGCGATAAACAAGTTAAAATGTGGCCCTTATTGTCGGGTGGTCAAGCCATGACGGTAGCCATGCATGAAGCA
CCCGTCAAAGAAGTTGCTTGGATCCCTGAGTTGAGCCTATTGGCCTCTGGAAGCTGGGACAAGACTATAAAGTATTGGGATACAAGGCAGCCAAACCCAGTACTTACACA
ACAACTTCCTGATCGCTGTTATTCAATGGCAGTGAGACATCCACTAATGGTAGTTGGTACTGCAGATAGAAATCTCATAGTATTTGACCTTCGAGCTCCTCAGGTTGGTT
CAATAGAGGGAAGGGTTGGTGTCCATCACCTTGATGAGGCTATGGCAAATAAGAACTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATATATTCTGTCAACTCCTTG
AACTTCCATCCCGTGCATCACACTTTTGCAACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGTGTGCTACGATTGGAGTAA
GGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTCCCACAGGAGGCTGAGGTTAAAGGCAAGCCTCGTGTTGGGGGCGGCGGAAGAAAGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCTAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGC
AACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCAGGTAATGTTGTCAGTACGCCTAAGGCTTTTATATCCCACGATCAACCGGTTTTATGCTCAG
CATGGAAGGATGATGGAACGACTGTGTTTTCTGGAGGCTGCGATAAACAAGTTAAAATGTGGCCCTTATTGTCGGGTGGTCAAGCCATGACGGTAGCCATGCATGAAGCA
CCCGTCAAAGAAGTTGCTTGGATCCCTGAGTTGAGCCTATTGGCCTCTGGAAGCTGGGACAAGACTATAAAGTATTGGGATACAAGGCAGCCAAACCCAGTACTTACACA
ACAACTTCCTGATCGCTGTTATTCAATGGCAGTGAGACATCCACTAATGGTAGTTGGTACTGCAGATAGAAATCTCATAGTATTTGACCTTCGAGCTCCTCAGGTTGGTT
CAATAGAGGGAAGGGTTGGTGTCCATCACCTTGATGAGGCTATGGCAAATAAGAACTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATATATTCTGTCAACTCCTTG
AACTTCCATCCCGTGCATCACACTTTTGCAACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGTGTGCTACGATTGGAGTAA
GGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTCCCACAGGAGGCTGAGGTTAAAGGCAAGCCTCGTGTTGGGGGCGGCGGAAGAAAGT
AG
Protein sequenceShow/hide protein sequence
MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEA
PVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQVGSIEGRVGVHHLDEAMANKNFTFKCHRDGSEIYSVNSL
NFHPVHHTFATAGSDGAFNFWDKDSKQRLKVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK