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HG10003474 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003474
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationChr08:1895060..1895347
RNA-Seq ExpressionHG10003474
SyntenyHG10003474
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]3.2e-1442.22Show/hide
Query:  SWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILI-KPQFMNASMADFIRED
        S +A ++K+ Y+ N D   A+ S +SSY W+S++WG+DLL  GLR+R+G+G+S++V  DPWLPRP +F+ I    P      + + + ED
Subjt:  SWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILI-KPQFMNASMADFIRED

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.4e-1746.15Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED
        P   V+ ++K  Y+++  +  A  +S SSY WK  +WG+DLL+KGLR RVG+GS+IK   DPWLPRP+TFKP+      ++ ++A FI  D
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED

XP_030502765.1 uncharacterized protein LOC115717936 [Cannabis sativa]1.9e-1443.33Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRE
        P S ++ +++  Y+ NG+   + L S+ S  W+SL WGK+LL+KGLR+RVGSG +I    D W+P  +TFKP   K    N  +AD I E
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRE

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.4e-1445.56Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRE
        P S ++ +++  Y+ NG+   A L S+ S  W+SL+WGK+LL+KGLR+RVGSG  I    D WLP  +TFKP   K    N  +AD I E
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRE

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]1.7e-1543.18Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFI
        P S +A ++KS Y+  G    A   +  S  WKS++WGK+LL+KGLR+R+GSG+ +     PW+P PS FKP+L      +  +ADFI
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFI

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein3.1e-1537.36Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED
        PES +A I+++ Y++  D   A+L S  S+ W+S+IWG+ +++ G+R+R+G+G  +K+ +  W+PRP  FKPI      M+ ++A+ I E+
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED

A0A2I0A354 Ribonuclease H protein1.5e-1442.22Show/hide
Query:  SWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILI-KPQFMNASMADFIRED
        S +A ++K+ Y+ N D   A+ S +SSY W+S++WG+DLL  GLR+R+G+G+S++V  DPWLPRP +F+ I    P      + + + ED
Subjt:  SWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILI-KPQFMNASMADFIRED

A0A6J1DX30 uncharacterized protein LOC1110248746.7e-1846.15Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED
        P   V+ ++K  Y+++  +  A  +S SSY WK  +WG+DLL+KGLR RVG+GS+IK   DPWLPRP+TFKP+      ++ ++A FI  D
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIRED

A0A803PWX1 Uncharacterized protein2.0e-1446.48Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFK
        P S  + ++K+ YY NG +  A+  + +S+ W+SL+WGK ++ KG R+R+G+G+S++V +DPWLPRP TFK
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFK

A0A803Q6Z2 Uncharacterized protein8.2e-1643.18Show/hide
Query:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFI
        P S +A ++KS Y+  G    A   +  S  WKS++WGK+LL+KGLR+R+GSG+ +     PW+P PS FKP+L      +  +ADFI
Subjt:  PESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFI

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.5e-0628.38Show/hide
Query:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPI
        +P + ++ +++S Y+ +  +    + +  SYAW+S+I G++LL +GL   +G G   KV  D W+   +   P+
Subjt:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein8.1e-0831.25Show/hide
Query:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWL---PRPSTFKPILIKPQFMNASMADFIREDD
        +PES +A + KS Y+   D   A L S  S+ WKS+   +++L +G R  VG+G  I +    WL   P  +  +   + PQ   AS++  ++  D
Subjt:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWL---PRPSTFKPILIKPQFMNASMADFIREDD

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-0728.38Show/hide
Query:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPI
        +P + ++ +++S Y+ +  +    + +  SYAW+S+I G++LL +GL   +G G   KV  D W+   +   P+
Subjt:  KPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCAGAGTCTTGGGTTGCTTTGATTATGAAAAGTGTCTATTATGAAAATGGTGATATCTTCCCAGCTGAGTTAAGCTCTTCTTCATCGTATGCCTGGAAAAGTTT
GATTTGGGGCAAAGATCTTCTTATTAAAGGACTTAGATACAGAGTGGGGAGTGGATCCTCGATTAAAGTGGGAGAAGACCCTTGGCTCCCCCGGCCGAGTACCTTTAAGC
CAATTTTGATTAAGCCACAGTTTATGAATGCTTCAATGGCTGATTTTATAAGGGAGGATGACTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCAGAGTCTTGGGTTGCTTTGATTATGAAAAGTGTCTATTATGAAAATGGTGATATCTTCCCAGCTGAGTTAAGCTCTTCTTCATCGTATGCCTGGAAAAGTTT
GATTTGGGGCAAAGATCTTCTTATTAAAGGACTTAGATACAGAGTGGGGAGTGGATCCTCGATTAAAGTGGGAGAAGACCCTTGGCTCCCCCGGCCGAGTACCTTTAAGC
CAATTTTGATTAAGCCACAGTTTATGAATGCTTCAATGGCTGATTTTATAAGGGAGGATGACTTTTGA
Protein sequenceShow/hide protein sequence
MKPESWVALIMKSVYYENGDIFPAELSSSSSYAWKSLIWGKDLLIKGLRYRVGSGSSIKVGEDPWLPRPSTFKPILIKPQFMNASMADFIREDDF