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HG10003489 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10003489
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr08:2191816..2192010
RNA-Seq ExpressionHG10003489
SyntenyHG10003489
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147942.1 probable calcium-binding protein CML13 [Cucumis sativus]1.5e-1282.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
XP_008448907.1 PREDICTED: probable calcium-binding protein CML13 [Cucumis melo]1.5e-1282.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
XP_022923443.1 probable calcium-binding protein CML13 [Cucurbita moschata]3.4e-1284.44Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLTAPFDFNRF EIMSKHMK EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
XP_023540891.1 probable calcium-binding protein CML13 [Cucurbita pepo subsp. pepo]2.6e-1284.44Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLTAPFDFNRF EIMSKHMKPE F+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
XP_038876882.1 probable calcium-binding protein CML13 [Benincasa hispida]3.1e-1386.67Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLTAPFDFNRF EIMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
TrEMBL top hitse value%identityAlignment
A0A0A0L2F2 Uncharacterized protein7.5e-1382.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
A0A1S3BLQ3 probable calcium-binding protein CML137.5e-1382.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
A0A5D3D7C6 Putative calcium-binding protein CML137.5e-1382.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
A0A6J1E9N4 probable calcium-binding protein CML131.7e-1284.44Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLTAPFDFNRF EIMSKHMK EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
A0A7G7Y0U3 CML137.5e-1382.22Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ KAIIAEENLT+PFDFNRF +IMSKHMKPEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
SwissProt top hitse value%identityAlignment
Q84VG0 Probable calcium-binding protein CML75.7e-1060Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ + I A+E LTAPFDF RF ++M  H++PEPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
Q8VZ50 Probable calcium-binding protein CML146.7e-1160Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+++Q K+II  ENL++PFDFNRF ++M+KH+K EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
Q94AZ4 Probable calcium-binding protein CML133.6e-1266.67Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ K+IIA ENL++PFDFNRF ++M+KH+K EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
Arabidopsis top hitse value%identityAlignment
AT1G12310.1 Calcium-binding EF-hand family protein2.5e-1366.67Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+QAQ K+IIA ENL++PFDFNRF ++M+KH+K EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
AT1G62820.1 Calcium-binding EF-hand family protein4.8e-1260Show/hide
Query:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE
        M SLG NP+++Q K+II  ENL++PFDFNRF ++M+KH+K EPF+
Subjt:  MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTCTTGGCAGCAACCCCAGTCAAGCCCAATTCAAAGCCATTATCGCCGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTTTTGAAATAATGTCTAA
GCATATGAAGCCTGAGCCCTTCGAATGGTGGCCAATTGAAGAGGGAACTAATGGAAAATCGGTTTTCTGTGCTTTACTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTCTTGGCAGCAACCCCAGTCAAGCCCAATTCAAAGCCATTATCGCCGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGCTTTTTTGAAATAATGTCTAA
GCATATGAAGCCTGAGCCCTTCGAATGGTGGCCAATTGAAGAGGGAACTAATGGAAAATCGGTTTTCTGTGCTTTACTGGAATGA
Protein sequenceShow/hide protein sequence
MHSLGSNPSQAQFKAIIAEENLTAPFDFNRFFEIMSKHMKPEPFEWWPIEEGTNGKSVFCALLE